These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2644#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 745 fasta sequence [CCAGGAGAGGGAAAGGAGT-GCTTGAGGG-GAGT--GCTGTGTGCTGAGCAAAGTC--CTCACGTTTTGAACAA-CTAATCC-TTTAAGATGTCAAAAGGACCGGCAGTAGGCATCGATCTGGGCACCACCTATTCCTGCGTGGGCATCTTCCAGCATGGTAAAGTGGAAATCATTGCCAATGACCAGGGAAACAGGACCACTCCCAGCTATGTGGCATTCACGGACACTGAGAGGCTGATTGGTGATGCTGCCAAGAACCAGGTGGCCATGAACCCAGGAAACACAGTGTTTGATGCCAAGCGTCTGATCGGTCGTAAGTTTGATGACGCCGTGGTGCAGTCGGACATGAAGCACTGGCCTT-TTAAAGTTGTCAACGATTCATCCAAACCCAAGATGGAAGTTGAGTACAAGGGTGAGATAAAGACCTTCTACCCTGAGGAGATTTCCTCTATGGTCCTCACCAAGATGAAGGAGATATCTGAGGCCTATCTCGGAAAGATTGTGAACAATGCTGTCATCACAGTTCCTGCTTACTTCAATGACTCCCAGCGCCAAGCCACCAAAGATGCTGGGACCATCGCTGGGCTCAATGTGCTGCGCATCATCAACGAACCCACAGCCGCAGCCATCGCTTATGGCCTGGACAAAAAGGTTGGCAGCGAGCGAAATGTACTTATCTTTGACCTCGGAGGGGGAACTTTTGATGTCTCCATCTTGACCATTGAGGACGGCATCTTTGAGGTCAAGTCCA] [+] EMBL BU804710 [CCAGGAGAGGGAAAGGAGT GCTTGAGGG GAGT GCTGTGTGCTGAGCAAAGTC CTCACGTTTTGAACAA CTAATCC TTTAAGATGTCAAAAGGACCGGCAGTAGGCATCGATCTGGGCACCACCTATTCCTGCGTGGGCATCTTCCAGCATGGTAAAGTGGAAATCATTGCCAATGACCAGGGAAACAGGACCACTCCCAGCTATGTGGCATTCACGGACACTGAGAGGCTGATTGGTGATGCTGCCAAGAACCAGGTGGCCATGAACCCAGGAAACACAGTGTTTGATGCCAAGCGTCTGATCGGTCGTAAGTTTGATGACGCCGTGGTGCAGTCGGACATGAAGCACTGGCCTT TTAAAGTTGTCAACGATTCATCCAAACCCAAGATGGAAGTTGAGTACAAGGGTGAGATAAAGACCTTCTACCCTGAGGAGATTTCCTCTATGGTCCTCACCAAGATGAAGGAGATATCTGAGGCCTATCTCGGAAAGATTGTGAACAATGCTGTCATCACAGTTCCTGCTTACTTCAATGACTCCCAGCGCCAAGCCACCAAAGATGCTGGGACCATCGCTGGGCTCAATGTGCTGCGCATCATCAACGAACCCACAGCCGCAGCCATCGCTTATGGCCTGGACAAAAAGGTTGGCAGCGAG ] [+] EMBL BU806736 [CCAGGAGAGGGAAAGGAGT GCTTGAGGG GAGT GCTGTGTGCTGAGCAAAGTC CTCACGTTTTGAACAA CTAATCC TTTAAGATGTCAAAAGGACCGGCAGTAGGCATCGATCTGGGCACCACCTATTCCTGCGTGGGCATCTTCCAGCATGGTAAAGTGGAAATCATTGCCAATGACCAGGGAAACAGGACCACTCCCAGCTATGTGGCATTCACGGACACTGAGAGGCTGATTGGTGATGCTGCCAAGAACCAGGTGGCCATGAACCCAGGAAACACAGTGTTTGATGCCAAGCGTCTGATCGGTCGTAAGTTTGATGACGCCGTGGTGCAGTCGGACATGAAGCACTGGCCTT TTAAAGTTGTCAACGATTCATCCAAACCCAAGATGGAAGTTGAGTACAAGGGTGAGATAAAGACCTTCTACCCTGAGGAGATTTCCTCTATGGTCCTCACCAAGATGAAGGAGATATCTGAGGCCTATCTCGGGAAGATTGTGAACAATGCTGTCATCACAGTTCCTGCTTACTTCAATGACTCCCAGCGCCAAGCCACCAAAGATGCTGGGACCATCGCTGGGCTCAATGTGCTGCGCATCATCAACGAACCCACAGCCGCAGCCATCGCTTATGGCCTGGACAAAAAG ] [+] EMBL BU806623 [CCAGGAGAGGGAAAGGAGT GCTTGAGGG GAGT GCTGTGTGCTGAGCAAAGTC CTCACGTTTTGAACAA CTAATCC TTTAAGATGTCAAAAGGACCGGCAGTAGGCATCGATCTGGGCACCACCTATTCCTGCGTGGGCATCTTCCAGCATGGTAAAGTGGAAATCATTGCCAATGACCAGGGAAACAGGACCACTCCCAGCTATGTGGCATTCACGGACACTGAGAGGCTGATTGGTGATGCTGCCAAGAACCAGGTGGCCATGAACCCAGGAAACACAGTGTTTGATGCCAAGCGTCTGATCGGTCGTAAGTTTGATGACGCCGTGGTGCAGTCGGACATGAAGCACTGGCCTT TTAAAGTTGTCAACGATTCATCCAAACCCAAGATGGAAGTTGAGTACAAGGGTGAGATAAAGACCTTCTACCCTGAGGAGATTTCCTCTATGGTCCTCACCA ] [+] EMBL BU806690 [ GGGAAAGGAGT GCTTGAGGG GAGT GCTGTGTGCTGAGCAAAGTC CTCACGTTTTGAACAA CTAATCC TTTAAGATGTCAAAAGGACCGGCAGTAGGCATCGATCTGGGCACCACCTATTCCTGCGTGGGCATCTTCCAGCATGGTAAAGTGGAAATCATTGCCAATGACCAGGGAAACAGGACCACTCCCAGCTATGTGGCATTCACGGACACTGAGAGGCTGATTGGTGATGCTGCCAAGAACCAGGTGGCCATGAACCCAGGAAACACAGTGTTTGATGCCAAGCGTCTGATCGGTCGTAAGTTTGATGACGCCGTGGTGCAGTCGGACATGAAGCACTGGCCTT TTAAAGTTGTCAACGATTCATCCAAACCCAAGATGGAAGTTGAGTACAAGGGTGAGATAAAGACCTTCTACCCTGAGGAGATTTCCTCTATGGTCCTCACCAAGATGAAGGAGATATCTGAGGCCTATCTCGGAAAGATTGTGAACAATGCTGTCATCACAGTTCCTGCTTACTTCAATGACTCCCAGCGCCAAGCCACCAAAGATGCTGGGACCATCGCTGGGCTCAATGTGCTGCGCATCATCAACGAACCCACAGCCGCAGCCATCGCTTATGGCCTGGACAAAAAGGTTGGCAGC ] [+] EMBL FR0063170 [ AAGGAGTGGCTTGAGGGNGAGTNNGCTGTGTGCTGAGCAAAGTCNNCTCACGTTTTTAACAACCTAATCCGTGTAAGATGTCAAAAGGACCGGCAGTAGGCATCGATCTGGGCACCACCTATTCCTGCGTGGGCATCTTCCAGCATGGTAAAGTGGAAATCATTGCCAATGACCAGGGAAACAGGACCACTCCCAGCTATGTGGCATTCACGGACACTGAGAGGCTGATTGGTGATGCTACCAAGAACCAGGTGGCCATGAACCCAGGAAACACAGTGTTTGATGCCAAGCGTCTGATCGGGCGTAAGTTTGATGACGCCGGGGTGCAGTCGGACATGA ] [+] EMBL FR0063180 [ GGAGT GCTTGAGGG GAGT GCTGTGTGCTGAGCAAAGTC CTCACGTTTTTAACAA CTAAGGG TGGAAGATGTCAAAAGGACCGGCAGTAGCCATCGATCTGGGCACCACCTATTCCTGCGTGGGCATCTTCCAGCATGGTAAAGTGGAAATCATTGCCAATGACCAGGGAAACAGGACCACTCCCAGCTATGTGGCATTCACGGACACTGAGAGGCTGATTGGTGATGCTATCAAGAACCAGGTGGCCATGAACCCAGGAAACACAGGGTTTGATGCCAAGC ] [+] EMBL FR0063144 [ T GCTTGAGGG GAGT GCTGTGTGCTGAGCAAAGTC CTCACGTTTTTAACAA CTAATCC TGGAAGATGTCAAAAGGACCGGCAGTAGGCATCGATCTGGGCACCACCTATTCCTGCGTGGGCATCTTCCAGCATGGTAAAGTGGAAATCATTGCCAATGACCAGGGAAACAGGACCACTCCCAGCTATGTGGCATTCACGGACACTGAGAGGCTGATTGGTGATGCTACCAAGAACCAGG ] [+] EMBL FR0063951 [ G GAGT GCTGTGTGCTGAGCAAAGTC CTCACGTTTTGAACAA CTAATCC TTTAAGAGGTCAGAAGGACCGGCAGTAGGCATCGATCTGGGCACCACCTATTCCTGCGTGGGCATCTTCCAGCATGGTAAAGTGGAAATCATTGCCAATGACCAGGGAAACAGGACCACTCCCAGCTATGTGGCATTCACGGACACTGAGAGGCTGATTGGTGATGCTGCCAAGAACCAGGTGGCCATGAACCCAGGAAACACAGTGTTTGATGCCAAGCGTCTGATCGGTCGTAAGTTTGATGACGCCCGTGTGCAGTCGGACATGAAGCACTGGCCTTNTTAAAGTTGTCAACG ] [+] EMBL FR0059133 [ TGC TTTAAGATGTCAAAAGGACCGGCAGTAGGCATCGATCTGGGCACCACCTATTCCTGCGTGGGCATCTTCCAGCATGGTAAAGTGGAAATCATTGCCAATGACCAGGGAAACAGGACCACTCCCAGCTATGTGGCATTCACGGACACTGAGAGGCTGATTGGTGATGCTGCCAAGAACCAGGTGGCCATGAACCCAGGAAACACAGTGTTTGATGCCAAGCGTCTGATCGGTCGTAAGTTTGATGACGCCGTGGTGCAGTCGGACATGAAGCACTGGCCTT TTAAAGTTGGC ACGATTCATCCAAACCCAA ] [+] EMBL FR0063895 [ tTGAGAAGATTTCCTCTATGGCCCTCACCAAGATGAAGGAGATATCTGAGGCCTATCTCGGAAAGATTGTG ACAATGCTGTCATCACAGATCCTGCTTACTTCAATGACTCCCAGCGCCAAGCCACCAAAGATGCTGGGACCATCGCTGGGCTCAATGTGCTGCGCATCATCAACGAACCCACAGNCCGAGNCATCGCTTATGGCCTGGACAAAAAGGGTGGCAGCGAGCGAAATGTACTTATCTTTGACCTCGGAGGGGGAACTTTTGATGTCTCCATCTTGACCATTGAGGACGGCATCTTTGAGGTCAAGTCCA] clustalw multiple alignements is not computed in this case |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |