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Takifugu rubripes
cluster # 2661 cluster # 2661       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2661#0 length = 832 sequences # 4  
consensus_2661#1 length = 467 sequences # 7  

consensusID : consensus_2661#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 832
fasta sequence
                              [GCAGCGTGCTGAATGGGAAACGGCACCCCCTCTAGCAGTGCTGGATCCAGGCCCGAGGATAAGACCCAAAAGGCAGAGACTTGCACCACTGTCGGGAGCAACAGTCCGTCAGCCACCATGACTCACCAGTACCCCGCGCTGACTCCTGAGCAGAGGAAGGAGCTGCAGGAAATTGCTCAAAAGATAGTGGCTCCAGGAAAAGGCATCCTTGCTGCTGATGAGTCCACCGGCAGCATGGCCAAACGCTTCACCCCCATCGGGGTTGAGAACACAGAGGAGAACAGGCGCCGCTACCGCCAGCTGCTCTTCACGGCCGACCAGCGCATCGACAGCTGTATCGGCGGAGTCATCTTCTTCCACGAAACGCTGTACCAGAAAACAGATGACGGCGTTCCCTTTTCCAAGCTGATCAAAGACCGTGGCATTGTTGTCGGCATCAAGGTGGACAAAGGTGTTGTCCCTCTCGCTGGAACAAACGGAGAGACAACCACTCAAGGTCTGGACGGGCTGTCTGAGCGTTGCGCGCAGTACAAGAAAGACGGAGCAGACTTCGCCAAGTGGCGCTGCGGGCTGAAGATCAGCAGCACCACTCCATCTGAGCTGGCCATCTTGGAGAATGCTAATGTTCTTGCACGATATGCCAGCATCTGCCAGCAGAATGGTATTGATCCCATTGTGGAGCCCGAGATCCTC-CCCGATGGAGACCACGACCTGCAGCGCTGTCAGTATGTCACCGAGAAGGTGTAGGCTGCGGAGCACTAAGCTCTGCCAGACCACCACGTATACCTTGAAGGCACTCTGCTGAAACCCAGCATGGTTACAGCCGGACATT]

[+] EMBL CA340970             [GCAGCGTGCTGAATGGGAAACGGCACCCCCTCTAGCAGTGCTGGATCCAGGCCCGAGGATAAGACCCAAAAGGCAGAGACTTGCACCACTGTCGGGAGCAACAGTCCGTCTGCCACCATGACTCACCAGTACCCCGCGCTGACTCCTGAGCAGAAGAAGGAGCTGCAGGAAATTGCTCAAAAGATAGTGGCTCCAGGAAAAGGCATCCTTGCTGCTGATGAGTCCACCGGCAGCATGGCCAAACGCTTCACCCCCATCGGGGTTGAGAACACAGAGGAGAACAGGCGCCGCTACCGCCAGCTGCTCTTCACGGCCGACCAGCGCATCGACAGCTGTATCGGCGGAGTCATCTTCTTCCACGAAACGCTGTACCAGAAAACAGATGACGGCGTTCCCTTTTCCAAGCTGATCAAAGACCGTGGCATTGTTGTCGGCATCAAGGTGGACAAAGGTGTTGTCCCTCTCGCTGGAACAAACGGAGAGACAACCACTCAAGGTCTGGACGGGCTGTCTGAGCGTTGCGCGCAGTACAAGAAAGACGGAGCAGACTTCGCCAAGTGG                                                                                                                                                                                                                                                                                ]
[+] EMBL FR0061458            [                                                                                                              AGCCACCATGACTCACCAGTACCCCGCGCTGACTCCTGAGCAGAGGAAGGAGCTGCAGGAAATTGCTCAAAAGATAGTGGCTCCAGGAAAAGGCATCCTTGCTGCTGATGAGTCCACCGGCAGCATGGCCAAACGCTTCACCCCCATCGGGGTTGAGAACACAGAGGAGAACAGGCGCCGCTACCGCCAGCTGCTCTTCACGGCCGACCAGCGCATCGACAGCTGTATCGGCGGAGTCATCTTCTTCCACGAAACGCTGTACCAGAAAACAGATGACGGCGTTCCCTTTTCCAAGCTGATCAAAGACCGTGGCATTGTTGTCGGCATCAAGGTGGACAAAGGTGGTTGCCCTCTCGCTGGAACAAACGGAGAGACAACCACTCAAGGGCTGGACG                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL FR0063051            [                                                                                                                                                                                                                                                                                                                                                                                          ACAGATTACGGCGTTCCCTTTTCCAAGCTGATCATTTACCGTGGCATTGTTGTCGGCATCAAGGTGGACAAAGGTGTTGTCCCTCTCGCTGGAACAAACGGAGAGACAACCACTCAAGGTCTGGACGGGCTGTCTGAGCGTTGCGCGCAGTACAAGAAAGACGGAGCAGACTTCGCCAAGTGGCGCTGCGTGCTGAAGATCAGCAGCACCACTCCATCTGAGCTGGCCATCTTGGAGAATGCTAATGTTCTTGCACGATATGCCAGCATCTGCCAGCAGAATGGTATTGTTCCCATTGTGGAGCCCGAGATCCTC CCCGATGGAGACCACGACCTGCAGCGCTGTCAGTATGTCACCGAAAAGGTGTAG                                                                                     ]
[+] EMBL FR0063001            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTGCACGCAGTACAAGAAAGAGGGAGCAGACTTCGCCGAGTGGCTCTGCTGGCTGAAAATCAACAACACCACTCCATCTGAGCTGGCCATCTTGCTGAATGCTAATGTTCTTGCACGATATGCCAGCATCTGCCAGCAGAATGGTATTGATCCCATTGTGCAGCCCGAGATCCTCTCCCGATGGAGACCACGACCTGCAGCGCTGTCAGTATGTCACCGAGAAGGTGTTAGCTGCGGAGCACTAAGCTCTGCCAGACCACCACGTATACCTTGAAGGCACTCTGCTGAAACCCAGCATGGTTACAGCCGGACATT]


>consensus_2661#0 GCAGCGTGCTGAATGGGAAACGGCACCCCCTCTAGCAGTGCTGGATCCAGGCCCGAGGAT AAGACCCAAAAGGCAGAGACTTGCACCACTGTCGGGAGCAACAGTCCGTCAGCCACCATG ACTCACCAGTACCCCGCGCTGACTCCTGAGCAGAGGAAGGAGCTGCAGGAAATTGCTCAA AAGATAGTGGCTCCAGGAAAAGGCATCCTTGCTGCTGATGAGTCCACCGGCAGCATGGCC AAACGCTTCACCCCCATCGGGGTTGAGAACACAGAGGAGAACAGGCGCCGCTACCGCCAG CTGCTCTTCACGGCCGACCAGCGCATCGACAGCTGTATCGGCGGAGTCATCTTCTTCCAC GAAACGCTGTACCAGAAAACAGATGACGGCGTTCCCTTTTCCAAGCTGATCAAAGACCGT GGCATTGTTGTCGGCATCAAGGTGGACAAAGGTGTTGTCCCTCTCGCTGGAACAAACGGA GAGACAACCACTCAAGGTCTGGACGGGCTGTCTGAGCGTTGCGCGCAGTACAAGAAAGAC GGAGCAGACTTCGCCAAGTGGCGCTGCGGGCTGAAGATCAGCAGCACCACTCCATCTGAG CTGGCCATCTTGGAGAATGCTAATGTTCTTGCACGATATGCCAGCATCTGCCAGCAGAAT GGTATTGATCCCATTGTGGAGCCCGAGATCCTCCCCGATGGAGACCACGACCTGCAGCGC TGTCAGTATGTCACCGAGAAGGTGTAGGCTGCGGAGCACTAAGCTCTGCCAGACCACCAC GTATACCTTGAAGGCACTCTGCTGAAACCCAGCATGGTTACAGCCGGACATT



consensusID : consensus_2661#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 467
fasta sequence
                              [CAGACTGAACCAGGAGGCACCTACGCATCCTCGACACCGAACAAACCTGCTCTGTACGCTCCCAGAGAACCATTAGCAGCCACCATGACTCACCAGTACCCCGCGCTGACTCCTGAGCAGAAGAAGGAGCTGCAGGAAATTGCTCAAAAGATAGTGGCTCCAGGAAAAGGCATCCTTGC-TGCTGATGAGTCCACCGGCAGCATGGCCAAACGCTTCACCCCCATCGGGGTTGAGAACACAGAGGAGAACAGGCGCCGCTACCGCCAGCTGCTCTTCACGGCCGACCAGCGCATCGA-CAGCTGTATCGGCGGAGTCATC-TTCTTCCACGAAACGCTGTACCAGAAAACAGATGACGGC-GTTCCCTTTTCCAAGCTGATCAAAGACCGTGGCATTGTTGTCGGCATCAAGGTGGACAAAGGTGTTGTCCCTCTCGCTGGAACAAACGGAGAGACAACCACTCAAGGTCT]

[+] EMBL FR0062432            [CAGACTGAACCAGGAGGCACCTACGCATCCTCGACACCTAACAAACCTGCTCTGTACGCTCCCAGAGAACCGTTAGCAGCCACCATGACTCACCAGTACCCCGCGCTGACTCCTGAGCAGAAGAAGGAGCTGCAGGAAATTGCTCAAAAGATAGTGGCTCCAGGAAAAGGCATCCTTGC TGCTGATGAGTCCACCGGCAGCATGGCCAAACGCTTCACCCCCATCGGGGTTGAGAACACAGAGGAGAACAGGCGCCGCTACCGCCAGCTGCTCTTCACGGCCGACCAGCGCATCGA CAGCTGTATCGGCGGAGTCATC TTCTTCCACGANACGCTGTACCAGAAAACAGATGACGGC GTTCCCTTTTCC                                                                                                  ]
[+] EMBL FR0062352            [        ACCAGGAGGCACCTACGCATCCTCGACACCTAACAAACCTGCTCTGTACGCTCCCAGAGAACCGTTAGCAGCCACCATGACTCACCAGTACCCCGCGCTGACTCCTGAGCAGAAGAAGGAGCTGCAGGAAATTGCTCAAAAGATAGGGGCTCCAGGAAAAGGCATCCTTGCTTGCTGATGAGTCCACCCGCAGCATGGCCAAACGCTTCACCCCCATCGGGGGTGAG                                                                                                                                                                                                                                            ]
[+] EMBL BU807655             [                aCACCTACGCATCCTCGACACCGAACAAACCTGCTCTGTACGCTCCCAGAGAACCATTAGCAGCCACCATGACTCACCAGTACCCCGCGCTGACTCCTGAGCAGAAGAAGGAGCTGCAGGAAATTGCTCAAAAGATAGTGGCTCCAGGAAAAGGCATCCTTGC TGCTGATGAGTCCACCGGCAGCATGGCCAAACGCTTCACCCCCATCGGGGTTGAGAACACAGAGGAGAACAGGCGCCGCTACCGCCAGCTGCTCTTCACGGCCGACCAGCGCATCGA CAGCTGTATCGGCGGAGTCATC TTCTTCCACGAAACGCTGTACCAGAAAACAGATGACGGC GTTCCCTTTTCCAAGCTGATCAAAGACCGTGGCATTGTTGTCGGCATCAAGGTGGACAAAGGTGTTGTCCCTCTCGCTGGAACAAACGGAGAGACAACCACTCAAGGTCT]
[+] EMBL BU806179             [                aCACCTACGCATCCTCGACACCGAACAAACCTGCTCTGTACGCTCCCAGAGAACCATTAGCAGCCACCATGACTCACCAGTACCCCGCGCTGACTCCTGAGCAGAAGAAGGAGCTGCAGGAAATTGCTCAAAAGATAGTGGCTCCAGGAAAAGGCATCCTTGC TGCTGATGAGTCCACCGGCAGCATGGCCAAACGCTTCACCCCCATCGGGGTTGAGAACACAGAGGAGAACAGGCGCCGCTACCGCCAGCTGCTCTTCACGGCCGACCAGCGCATCGA CAGCTGTATCGGTGGAGTCATC TTCTTCCACGAAACGCTGTACCAGAAAACAGATGACGGC GTTCCCTTTTCCAAGCTGATCAAAGACCGTGGCATTGTTGTCGGCATCAAGGTGGACAAAGGTGTTGTCCCTCTCGCTGGAACAAACGGAG                   ]
[+] EMBL FR0062273            [                                                        CGCTCCCAGAGAACCATTAGCAGCCACCATGACTCACCAGTACCCCGCGCTGACTCCTGAGCAGAAGAAGGAGCTGCAGGAAATTGCTCAAAAGATAGTGGCTCCAGGAAAAGGCATCCTTGC TGCTGATGAGTCCACCGGCAGCATGGCCAAACGCTTCACCCCCATCGGGGTTGAGAACACAGAGGAGAACAGGCGCCGCTACCGCCAGCTGCTCTTCACGGCCGACCAGCGCATCGACCAGCTGTATCGGCGGAGTCATCTTTTTTCCACGAAACGCTGGACCAGAAAACAGAT                                                                                                                     ]
[+] EMBL FR0062988            [                                                                       ATTAGCAGCCGCGGTGACTCACCAGTGCCCCGCGCTGACTCCTGAGCAGAAGAAGGAGCTGCAGGAAATTGCTCAAAAGATAGTGGCTCCAGGAAAAGGCATCCTTGC TGCTGATGAGTCCACCGGCAGCATGGCCAAACGCTTCACCCCCATCGGGGNTGAGAACACAGAGGAGAACAGGCGCCGCTACCGCCAGCTGCTCTTCACGGCCGACCAGCGCATCGA CAGCTGTATCGGCGGAGTCATC TTCTTCCACGAAACGCTGTACCAGAAAACAGATGACGGCGGGTCCCTTTTCCAAGCTGATCAAAGACCGTGGCATTGTTGTCGGCATCAAGGGGGACAAAGGTGTTGTCCCTCTCGCTGGAACAAACGGAGAGACAACCACT        ]
[+] EMBL FR0059554            [                                                                       ATTAGCAGCCACCATGACTCACCAGTACCCCGCGCTGACTCCTGAGCAGAAGAAGGAGCTGCAGGAAATTGCTCAAAAGATAGTGGCTCCAGGAAAAGGCATCCTTGC TGCTGATGAGACCACCGGCAGCATGGCCAAACGCTTCACCCCCATCGGGGTTGAGAACACAGAGGAGAACAGGCGCCGCTACCGCCAGCTGCTCTTCACGGCCGACCAGCGCATCGA CAGCTGTATCGGTGGAGTCATC TTCTTCCACGAAACGCTGTACCAGAAAACAGATGACGGC GTTCCCTTTTCCAAGCTGATCAAAGACCGTGGCATTGTTGGCGGCATCAAGGTGGACAAAGGTGTTGTCCCTCTCGCTGGAACAAACGGAGAGACAACCACTC       ]


>consensus_2661#1 CAGACTGAACCAGGAGGCACCTACGCATCCTCGACACCGAACAAACCTGCTCTGTACGCT CCCAGAGAACCATTAGCAGCCACCATGACTCACCAGTACCCCGCGCTGACTCCTGAGCAG AAGAAGGAGCTGCAGGAAATTGCTCAAAAGATAGTGGCTCCAGGAAAAGGCATCCTTGCT GCTGATGAGTCCACCGGCAGCATGGCCAAACGCTTCACCCCCATCGGGGTTGAGAACACA GAGGAGAACAGGCGCCGCTACCGCCAGCTGCTCTTCACGGCCGACCAGCGCATCGACAGC TGTATCGGCGGAGTCATCTTCTTCCACGAAACGCTGTACCAGAAAACAGATGACGGCGTT CCCTTTTCCAAGCTGATCAAAGACCGTGGCATTGTTGTCGGCATCAAGGTGGACAAAGGT GTTGTCCCTCTCGCTGGAACAAACGGAGAGACAACCACTCAAGGTCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2661#0      GCAGCGTGCTGAATGGGAAACGGCACCCCCTCTAGCAGTGCTGGATCCAGGCCCGAGGAT 60
consensus_2661#1      -------------------------------CAGACTGAACCAGG---AGGCACCTACGC 26
                                                     *   * *  *  *    **** *      

consensus_2661#0      AAGACCCAAAAGGCAGAGACTTGCACC--ACTGTCGGGAGCAACAGTCCGTCAGCCACCA 118
consensus_2661#1      ATCCTCGACACCGAACAAACCTGCTCTGTACGCTCCCAGAGAACCATTAG-CAGCCACCA 85
                      *    * * *  * * * ** *** *   **  **      ***  *  * *********

consensus_2661#0      TGACTCACCAGTACCCCGCGCTGACTCCTGAGCAGAGGAAGGAGCTGCAGGAAATTGCTC 178
consensus_2661#1      TGACTCACCAGTACCCCGCGCTGACTCCTGAGCAGAAGAAGGAGCTGCAGGAAATTGCTC 145
                      ************************************ ***********************

consensus_2661#0      AAAAGATAGTGGCTCCAGGAAAAGGCATCCTTGCTGCTGATGAGTCCACCGGCAGCATGG 238
consensus_2661#1      AAAAGATAGTGGCTCCAGGAAAAGGCATCCTTGCTGCTGATGAGTCCACCGGCAGCATGG 205
                      ************************************************************

consensus_2661#0      CCAAACGCTTCACCCCCATCGGGGTTGAGAACACAGAGGAGAACAGGCGCCGCTACCGCC 298
consensus_2661#1      CCAAACGCTTCACCCCCATCGGGGTTGAGAACACAGAGGAGAACAGGCGCCGCTACCGCC 265
                      ************************************************************

consensus_2661#0      AGCTGCTCTTCACGGCCGACCAGCGCATCGACAGCTGTATCGGCGGAGTCATCTTCTTCC 358
consensus_2661#1      AGCTGCTCTTCACGGCCGACCAGCGCATCGACAGCTGTATCGGCGGAGTCATCTTCTTCC 325
                      ************************************************************

consensus_2661#0      ACGAAACGCTGTACCAGAAAACAGATGACGGCGTTCCCTTTTCCAAGCTGATCAAAGACC 418
consensus_2661#1      ACGAAACGCTGTACCAGAAAACAGATGACGGCGTTCCCTTTTCCAAGCTGATCAAAGACC 385
                      ************************************************************

consensus_2661#0      GTGGCATTGTTGTCGGCATCAAGGTGGACAAAGGTGTTGTCCCTCTCGCTGGAACAAACG 478
consensus_2661#1      GTGGCATTGTTGTCGGCATCAAGGTGGACAAAGGTGTTGTCCCTCTCGCTGGAACAAACG 445
                      ************************************************************

consensus_2661#0      GAGAGACAACCACTCAAGGTCTGGACGGGCTGTCTGAGCGTTGCGCGCAGTACAAGAAAG 538
consensus_2661#1      GAGAGACAACCACTCAAGGTCT-------------------------------------- 467
                      **********************                                      

consensus_2661#0      ACGGAGCAGACTTCGCCAAGTGGCGCTGCGGGCTGAAGATCAGCAGCACCACTCCATCTG 598
consensus_2661#1      ------------------------------------------------------------
                                                                                  

consensus_2661#0      AGCTGGCCATCTTGGAGAATGCTAATGTTCTTGCACGATATGCCAGCATCTGCCAGCAGA 658
consensus_2661#1      ------------------------------------------------------------
                                                                                  

consensus_2661#0      ATGGTATTGATCCCATTGTGGAGCCCGAGATCCTCCCCGATGGAGACCACGACCTGCAGC 718
consensus_2661#1      ------------------------------------------------------------
                                                                                  

consensus_2661#0      GCTGTCAGTATGTCACCGAGAAGGTGTAGGCTGCGGAGCACTAAGCTCTGCCAGACCACC 778
consensus_2661#1      ------------------------------------------------------------
                                                                                  

consensus_2661#0      ACGTATACCTTGAAGGCACTCTGCTGAAACCCAGCATGGTTACAGCCGGACATT 832
consensus_2661#1      ------------------------------------------------------
                                                                            




Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)