These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2678#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 468 fasta sequence [TCAGACAGAAAAGGTCTTTTGGCAAGAAAGCC-AAAAAAGGAGCCATGTGGAAATTCACACTGGACCTGACCCACCCAGTGGAGGATGGGATTCTGGACTCTGCAAACTTTGAAACCTTCCTTAAAGAGAGGATCAAGGTCAATGGTAAAACAGGGAATCTGGGCAACATCGTCCACGTTGGCCGCATGAAGAACAAGATCAACGTCACATCTGAGAAGCAGTTTTCCAAAAGGTATCTGAAGTACCTCACCAAGAAGTACCTGAAGAAAAACAACCTCCGGGA-CTGGCTGAGAGTGGTGGCGTCGGACAAGGAGACGTACGAGCTGCGATACTTCCAGATCAGTCAGGATGACGAGTCGGAGGCAGATGAGTGAATCTCGTGACCTGTCTGCAGAATAAAATATTGAAAGTAACCAAAATAAAAAACAAAAAAAAATCCCGGGGGGGGCCCGGGACCAAATTTTTGGC] [+] EMBL CA330410 [TCAGACAGAAAAGGTCTTTTGGCAAGAAAGTC AAAAACCGAGCCATGTGGAAATTCACACTGGACCTGACCCACCCAGTGGAGGATGGGATTCTGGACTCTGCAAACTTTGAAACCTTCCTCAAAGAGAGGATCAAGGTCAATGGTAAAACAGGGAATCTGGGCAACATCGTCCACGTTGGCCGCATGAAGAACAAGATCAACGTCACATCTGAGAAGCAGTTTTCCAAAAGGTATCTGAAGTACCTCACCAAGAAGTACCTGAAGAAAAACAACCTCCGGGA CTGGCTGAGAGTGGTGGCGTCGGACAAGGAGACGTACGAGCTGCGATACTTCCAGATCAGTCAGGATGACGAGTCGGAGGCAGATGAGTGAATCTCGTGACCTGTCTGCAGAATAAAATATTGAAAGT ] [+] EMBL CA845363 [ AGACAGAAAAGGTCTTTTGGCAAGAAAGCC AAAAAAGGAGCCATGTGGAAATTCACACTGGACCTGACCCACCCAGTGGAGGATGGGATTCTGGACTCTGCAAACTTTGAAACCTTCCTCAAAGAGAGGATCAAGGTCAATGGTAAAACAGGGAATCTGGGCAACATCGTCCACGTTGGCCGCATGAAGAACAAGATCAACGTCACATCTGAGAAGCAGTTTTCCAAAAGGTATCTGAAGTACCTCACCAAGAAGTACCTGAAGAAAAACAACCTCCGGGA CTGGCTGAGAGTGGTGGCGTCGGACAAGGAGACGTACGAGCTGCGATACTTCCAGATCAGTCAGGATGACGAGTCGGAGGCAGATGAGTGAATCTCGTGACCTGTCTGCAGAATAAAATATTGAAAGTA ] [+] EMBL CA845288 [ AAAGGTCTTTTGGCAAGAAAGCC AAAAAAGGAGCCATGTGGAAATTCACACTGGACCTGACCCACCCAGTGGAGGATGGGATTCTGGACTCTGCAAACTTTGAAACCTTCCTTAAAGAGAGGATCAAGGTCAATGGTAAAACAGGGAATCTGGGCAACATCGTCCACGTTGGCCGCATGAAGAACAAGATCAACGTCACATCTGAGAAGCAGTTTTCCAAAAGGTATCTGAAGTACCTCACCAAGAAGTACCTGAAGAAAAACAACCTCCGGGA CTGGCTGAGAGTGGTGGCGTCGGACAAGGAGACGTACGAGCTGCGATACTTCCAGATCAGTCAGGATGACGAGTCGGAGGCAGATGAGTGAATCTCGTGACCTGTCTGCAGAATAAAATATTGAAAGTAA ] [+] EMBL FR0056477 [ TTTGGCAAGAAAGCCAAAAAAAGGAGCCATGTGGAAATTCACACTGGACCTGACCCACCCAGTGGAGGATGGGATTCTGGACTCTGCAAACTTTGAAACCTTCCTCAAAGAGAGGATCAAGGTCAATGGTAAAACAGGGAATCTGGGCAACATCGTCCACGTTGGCCGCATGAAGAACAAGATCAACGTCACATCTGAGAAGCAGTTTTCCAAAAGGTATCTGAAGTACCTCACCAAGAAGTACCTGAAGAAAAACAACCTCCGGGA CGGGCTGAAAGTGGTGGCGTCt ] [+] EMBL CA845620 [ TGGCAAGAAAGCT CTTTAAGAAGCCATGNGGAAATTCACACTGGACCTGACCCACCCAGTGGAGGATGGGATTCTGGACTCTGCAAACTTTGAAACCTTCCTTAAAGAGAGGATCAAGGTCAATGGTAAAACAGGGAATCTGGGCAACATCGTCCACGTTGGCCGCATGAAGAACAAGATCAACGTCACATCTGAGAAGCAGTTTTCCAAAAGGTATCTGAAGTACCTCACCAAGAAGTACCTGAAGAAAAACAACCTCCGGGA CTGGCTGAGAGTGGTGGCGTCGGACAAGGAGACGTACGAGCTGCGATTCTTCCAGATCAGTCAGGATGACGAGTCGGAGGCAGATGAGTGAATCTCGTGACCTGTCTGCAGAATAAAATATTGAAAGTA ] [+] EMBL FR0055210 [ GGCAAGAAAGCC AAAAAAGGAGCCATGTGGAAATTCACACTGGACCTGACCCACCCAGTGGAGGATGGGATTCTGGACTCTGCAAACTTTGAAACCTTCCTTAAAGAGAGGATCAAGGTCAATGGTAAAACAGGGAATCTGGGCAACATCGTCCACGTTGGCCGCATGAAGAACAAGATCAACGTCACATCTGAGAAGCAGTTTTCCAAAAGGTATCTGAAGTACCTCACCAAGAAGTACCTGAAGAAAAACAACCTCCGGGA CTGGCTGAGAGTGGTGGCGTCGGACAAGGAGACGTACGAGCTGCGATACTTCCAGATCAGTCAGGATGACGAGTCGGAGGCAGATGAGTGAATCTCGTGACCTGTCTGCAGAATAAAATATTGAAAGTAACCAAAATAAAAAACAAAAAAAAATCCCGGGGGGGGCCCGGGACCAAATTTTTGGC] [+] EMBL FR0056655 [ GCCATGTGGAAATTCACACTGGACCTGACCCACCCAGTGGAGGATGGGATTCTGGACTCTGCAAACTTTGAAACCTTCCTTAAAGAGAGGATCAAGGTCAATGGTAAAACAGGGAATCTGGGCAACATCGTCCACGTTGGCCGCATGAAGAACACGATCAACGTCACATCTGAGAAGCAGTTTTCCAGAAGGTATCTGAAGTAGCTCACCAAGAAGTACCTGAGGAGAAACAACCTCCGGGAGCTGGCTGAGAGTGGTGGCGTCGGACAAGGAGACGTAGGAGCTGCGAGACT ] [+] EMBL CA844930 [ ATGTGGAAATTCACACTGGACCTGACCCACCCAGTGGAGGATGGGATTCTGGACTCTGCAAACTTTGAAACCTTCCTTAAAGAGAGGATCAAGGTCAATGGTAAAACAGGGAATCTGGGCAACATCGTCCACGTTGGCCGCATGAAGAACAAGATCAACGTCACATCTGAGAAGCAGTTTTCCAAAAGGTATCTGAAGTTTCTTTCCAAGAAGTACCTGAAGAAAAACAACCTCCGGGA CTGGCTGAGAGTGGTGGCGTCGGACAAGGAGACGTACGAGCTGCGATACTTCCAGATCAGTCAGGATGACGAGTCGGAGGCAGATGAGTGAATCTCGTGACCTGTCTGCAGAATAAAATATTGAAAGTAA ] [+] EMBL FR0055885 [ CCTCAAAGAGAGGATCAAGGTCAATGGTAAAACAGGGAATCTGGGCAACATCGTCCACGTTGGCCGCATGAAGAACAAGATCAACGTCACATCTGAGAAGCAGTTTTCCAAAAGGTATCTGAAGTACCTCACCAAGAAGTACCTGAAGAAAAACAACCTCCGGGA CTGGCTGAGAGTGGTGGCGTCGGACAAGGAGACGTACGAGCTGCGATACTTCCAGATCAGTCAGGATGACGAGTCGGAGGCAGATGAGTGAATCTCGTGACCTGTCTGCAGAATAAA ] [-] EMBL CA588809 [ AGAAGTACCTGAAGAAAAACAACCTCCGGGA CTGGCTGAGAGTGGTGGCGTCGGACAAGGAGACGTACGAG ] [+] EMBL CA329880 [ TCCAGATCAGTCAGGATGACGAGTCGGAGGCAGATGAGTGAATCTCGTGACCTGTCTGCAGAATAAAATATTGAAAGT ] clustalw multiple alignements is not computed in this case |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |