These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2679#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 783 fasta sequence [GCGGCCCCGTTTAAACCAAATGAGAAGGATCTTCGTCCTCTGGGTTATTGCAGCTGGAAAACGTACCTTT-CGTGTTTCGATCAGGGAAATAAATACAACAAGACAGAGCGTTGGACGACAGCGTAAAGTCGGTCTTACGGCGAAAATAGCCTGAGTAATAGCTATTTTTAAAATCGTCTCCAGGCGTACGTAGTTTTAGCTCGCTAGCTAGCTAACTAC-GCTAGTCTTCGAGGGAAGGCCGTCGAGTTCGCCGAGCGTCGGACATTTGACGGATAGTCTTTC-TGGCATATTGCAGTTGGCCACCACTGCTTGGATAAAACAAAACCCCGAGTCAAAAGAGAGAAATTTCGTGAGAGGATGGC-TTTGAAAAGGATTAACAAGGAGCTGTCTGACCTGTCTCGTGACCCTCCATCCCAGTGCTCAGCAGGCCCGGTGGGCGACGACTTGTTTCACTGGCAGGCTACAATCATGGGACCAGCTGACAGTCCATATCAGGGGGGAGTTTTCTTCTTGACAATTCATTTTCCAACAGATTATCCTTTCAAACCACCCAAGGTTGCATTTACCACACGAATCTACCACCCAAATATTAATAGTAATGGCAGCATCTGTCTGGATATCCTCAGATCACAGTGGTCTCCTGCACTTACCATCTCTAAAGTTCTTCTCTCCATTTGCTCACTTCTATGTGACCCGAACCCTGATGACCCGCTGGTACCAGAGATCGCACGGATCTACAAAACAGACGTCGCCAGATACACCAAAACGGCAAAAGAATGGACA] [+] EMBL CA845801 [GCGGCCCCCTTTAAACCAAATGAGAAGGATCTTCGTCCTCTGGGTTATTGCATCTGGAAAACGTACCTTT CGTGTTTCGATCAGGGAAATAAATACAACAAGACAGAGCGTTGGACGACAGCGTAAAGTCGGTCTTACGGCGAAAATAGCCTGAGTAATAGCTATTTTTAAAATCGTCTCCAGGCGTACGTAGTTTTAGCTCGCTAGCTAGCTAACTAC GCTAGTCTTCGAGGGAAGGCCGTCGAGTTCGCCGAGCGTCGGACATTTGACGGATAGTCTTTC TGGCATATTGCAGTTGGCCACCACTGCTTGGATAAAACAAAACCCCGAGTCAAAAGAGAGAAATTTCGTGAGAGGATGGC TTTGAAAAGGATTAACAAGGAGCTGTCTGACCTGTCTCGTGACCCTCCATCCCAGTGCTCAGCAGGCCCGGTGGGCGACGACTTGTTTCACTGGCAGGCTACAATCATGGGACCAGCTGACAGTCCATATCAGGGGGGAGTTTTCTTCTTGACAATTCATTTTCCAACAGATTATCCTTTCAAACCACCCAAGGTTGCATTTACCACACGAATCTACCACCCAAATATTAATAGTAATGGCAGCATCTGTCTGGATATCCTCAGATCACAGTGGTCTCCTGCACTTACCATCTCTAAAGTTCTTCTCTCCATTTGCTCACTTCTATGTGACCCGAACCCTGATGACCCGCTGGTACCAGAGATCGCACGGATCTACAAAACAGACGTCGCCAGATACACCAAAACGGCAAAAGAATGGACA] [+] EMBL CA332955 [GCGGCC GAAACCAAATGAGAAGGATCTTCGTCCTCTGGGTTATTGCAGCTGGAAAACGTACCTTT CGTGTTTCGATCAGGGAAATAAATACAACAAGACAGAGCGTTGGACGACAGCGTATAGTCGGTCTTACGGCGAAAATAGCCTGAGTAATAGCTATTTTTAAAATCGTCTCCAGGCGTACGTAGTTTTAGCTCGCTAGCTAGCTAACTAC GCTAGTCTTCGAGGGAAG ] [+] EMBL CA588263 [ gCCCGTTTAAACCAAATGAGAAGGATCTTCGTCCTCTGGGTTATTGCTTTTGGAAAACGTACCTTT CGTGTTTCGATCAGGGAAATAAATACAACAAGACAGAGCGTTGGACGACAGCGTAAAGTCGGTCTTACGGCGAAAATAGCCTGAGTAATAGCTATTTTTAAAATCGTCTCCAGGCGTACGTAGTTTTAGCTCGCTAGCTAGCTAACTAC GCTAGTCTTCGAGGGAAGGCCGTCGAGTTCGCCGAGCGTCGGACATTTGACGGATAGTCTTTC TGGCATATTGCAGTTGGCCACCACTGCTTGGATAAAACAAAACCCCGAGTCAAAAGAGAGAAATTTCGTGAGAGGATGGC TTTGAAAAGGATTAACAAGGAGCTGTCTGACCTGTCTCGTGACCCTCCATCCCAGTGCTCAGCAGGCCCGGTGGGCGACGACTTGTTTCACTGGCAGGCTACAATCATGGGACCAGCTGACAGTCCATATCAGGGGGGAGTTTTCTTCTTGACAATTCATTTTCCAACAGATTATCCTTTCAAACCACCCAAGGTTGCATTTACCACACGAATCTACCACCCAAATATTAATAGTAATGGCAGCATCTGTCTGGATATCCTCAGATCACAGTGGTCTCCTGCACTTACCATCTCTAAAGTTCTTCTCTCCATTTGCTCACTTCTATGTGACCCGAACCCTGATGACCCGCTGGTACCAGAGATCGCACGGATCTACAAAACAGACGTCGCCAGATACACCAAAACGGCAAAAGAATGGACA] [+] EMBL CA590379 [ AAACCAAATGAGAAGGATCTTCGTCCTCTGGGTTATTGCAGCTGGAAAACGTACCTTT CGTGTTTCGATCAGGGAAATAAATACAACAAGACAGAGCGTTGGACGACAGCGTATAGTCGGTCTTACGGCGAAAATAGCCTGAGTAATAGCTATTTTTAAAATCGTCTCCAGGCGTACGTAGTTTTAGCTCGCTAGCTAGCTAACTAC GCTAGTCTTCGAGGGAAGGCCGTCGAGTTCGCCGAGCGTCGGACATTTGACGGATAGTCTTTC TGGCATATTGCAGTTGGCCACTACTGCTTGGATAAAACAAAACCCCGAGTCAAAAGAGAGAAATTTCGTGAGAGGATGGC TTTGAAAAGGATTAACAAGGAGCTGTCTGACCTGTCTCGTGACCCTCCATCCCAGTGCTCAGCAGGCCCGGTGGGCGACGACTTGTTTCACTGGCAGGCTACAATCATGGGACCAGCTGACAGTCCATATCAGGGGGGAGTGTTCTTCTTGACCATTCATTTTCCCACAGAGTATCCTTTCAAACCACCCAAGGGTGGATTTACCACcaca ] [+] EMBL CA590260 [ AACCAAATGAGAAGGATCTTCGTCCTCTGGGTTATTGCAGCTGGAAAACGTACCTTT CGTGTTTCGATCAGGGAAATAAATACAACAAGACAGAGCGTTGGACGACAGCGTAAAGTCGGTCTTACGGCGAAAATAGCCTGAGTAATAGCTATTTTTAAAATCGTCTCCAGGCGTACGTAGTTTTAGCTCGCTAGCTAGCTAACTAC GCTAGTCTTCGAGGGAAGGCCGTCGAGTTCGCCGAGCGTCGGACATTTGACGGATAGTCTTTC TGGCATATTGCAGTTGGCCACCACTGCTTGGATAAAACAAAACCCCGAGTCAAAAGAGAGAAATTTCGTGAGAGGATGGC TTTGAAAAGGATTAACAAGGAGCTGTCTGACCTGTCTCGTGACCCTCCATCCCAGTGCTCAGCAGGCCCGGTGGGCGACGACTTGTTTCACTGGCAGGCTACAATCATGGGACCAGCTGACAGTCCATATCAGGGGGGAGTTTTCTTCTTGACAATTCATTTTCCAACAGATTATCCTTTCAAACCACCCAAGGTTGCATTTACCACACGAATCTACCACCCAAATATTAATAGTAATGGCAGCATCTGTCTGGATATC ] [+] EMBL CA844789 [ ATGAGAAGGATCTTCGTCCTCTGGGTTATTGCAGCTGGAAAACGTACCTTT CGTGTTTCGATCAGGGAAATAAATACAACAAGACAGAGCGTTGGACGACAGCGTAAAGTCGGTCTTACGGCGAAAATAGCCTGAGTAATAGCTATTTTTAAAATCGTCTCCAGGCGTACGTAGTTTTAGCTCGCTAGCTAGCTAACTAC GCTAGTCTTCGAGGGAAGGCCGTCGAGTTCGCCGAGCGTCTGTTATTTGACGGATAGTCTTTC TGGCATATTGCAGTTGGCCACCACTGCTTGGATAAAACAAAACCCCGAGTCAAAAGAGAGAAATTTCGTGAGAGGATGGC TTTGAAAAGGATTAACAAGGAGCTGTCTGACCTGTCTCGTGACCCTCCATCCCAGTGCTCAGCAGGCCCGGTGGGCGACGACTTGTTTCACTGGCAGGCTACAATCATGGGACCAGCTGACAGTCCATATCAGGGGGGAGTTTTCTTCTTGACAATTCATTTTCCAACAGATTATCCTTTCAAACCACCCGAGGTTGCATTTACCACACGAATCTACCACCCAAATATTAATAGTAATGGCAGCATCTGTCTGGATATCCTCAGATCACAGTGGTCTCCTGCACTT ] [+] EMBL FR0062132 [ caTTATTGCAGCTGTAAAACGTACCTTT CGTGCTTCGATGGGGGAAATAAATACAACAAGACATAGCGTTCCACGACAGCGTAAAGTCGGTCTTACGGCTAAAATAGCCTGAGTAATAGCTATTTTTAAAATCGTCTCCAGGCG ACGTAGTTTTAGCTCGCTAGCTAGCTAACTAC GCTAGTCTTCGAGGGAAGGCCGTCGAGTTCGCCGAGCTGCGGACATTTGACGGATAGTCTTTCTTGGCATATTGCAGGTGGCCACCACTTGTTGGATAAAACAAAACCCCGAGTCAAAAGAAAGAAATTTC ] [+] EMBL BU806856 [ AAACGTACCTTT CGTGTTTCGATCAGGGAAATAAATACAACAAGACAGAGCGTTGGACGACAGGGGAAAGGCGGGCTTACGGGGAAAATAGGCTGAGGAATAGCTATTGTTAAAATCGGCTCCAGGGGTACGGAGGTTTAGGTCGGTAGGTAGCTAACTAC GCTAGGCTTCGAGGGAAGGCCGGCGAGTTCGCCGAGCGTCGGACATTTGACGGATAGGCTTTC TGGCATATTGCAGTTGGGCACCACTGCTTGGATAAAACAAAACCCCGAGTCAAAAGAGAGAAATTTCGTGAGAGGATGGC TTTGAAAAGGATTAACAAGGAGCTGTCTGACCTGTCTCGTGACCCTCCATCCCAGTGCTCAGCAGGCCCGGTGGGCGACGACTTGTTTCACTG ] [+] EMBL FR0063198 [ AACGTACCTTTGCGGTGTTCGATCAGGGAAATAAATACAACACGACAGAGCGTTGGACGACAGCGTATAGTCGGTCTTACGGCGAAAATAGCCTGAGTAATAGCTATTTTTAAAATCGTCTCCAGGCGTACGTAGATTTAGCTCGCTAGCTAGCTAACTACAGCTAG CTTCGAGGGAAGGCCGGCGAGTTCGCCGAGCGTCGGACATTTGACGGATAGTCTTTC TGGCATATTGCAGTTGGCCACTACTGCTTGGATAAAACAAAACCCCGAGTCAAAAGAGAGAAATTTCGTGAGAGGATGGC TTTGAAAAGGATTAACAAGGAGCTGTCTGACCTGTCTCGTGACCCTCCATCCCAGNGCTCAGCAGGCCCGGGGGGCGACGACTTGTTTCACTGGCAGGCTACAATCATGGGACCAGCTGACAGTCCATATCAGGGGGGAGTTTTCTTCTTGACAATTCA ] [+] EMBL FR0060889 [ gggggGATCAGGGAAATAAATACAACAAGACAGAGCGTTGGACGACAGCGTAAAGTCGGTCTTACGGCGAAAATAGCCTGAGTAATAGCTATTTTTAAAATCGTCTCCAGGCGTACGTAGTTTTAGCTCGCTAGCTAGCTAACTAC GCTAGTCTTCGAGGGAAGGCCGTCGAGTTCGCCGAGCGTCGGACATTTGACGGATAGTCTTTC TGGCATATTGCAGATGGCCACCACTGCTTGGATAAAACAAAACCCCGAGTCAAAAGAGAGAAATTTCGTGAGAGGATGGCTTTTAAAAAGGATTAACAGGGAGGTGTCTGACCTGTC ] [+] EMBL FR0059425 [ ATCAGGGAAATAAATACAACAAGACAGAGCGTTGGACGACAGCGTATAGTCGGTCTTACGGCGAAAATAGCCTGAGTAATAGCTATTTTTAAAATCGTCTCCAGGCGTACGTAGTTTTAGCTCGCTAGCTAGCTAACTAC GCTAGTCTTCGAGGGAAGGCCGTCGAGTTCGCCGAGCGTCGGACATTTGACGGATAGTCTTTC TGGCATATTGCAGGTGGCCACTACTGCTTGGATAAAACAAAACCCCGAGTCAAAAGAGAGAAATTTCGTGAGAGGATGGCTTTTGAAAAGGATTAACAAG ] clustalw multiple alignements is not computed in this case |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |