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Takifugu rubripes
cluster # 2691 cluster # 2691       Sequences # 12       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2691#0 length = 762 sequences # 11  
consensus_2691#1 length = 219 sequences # 1  

consensusID : consensus_2691#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 762
fasta sequence
                              [AGCTTCACAGCAGGATGTCTTCATCATCTCTCAGAGTCTTCCTCCTCTTCATCAGCCTGTACACGGCAGGTGGATTTCAACTTTATTCGGTGGATAGCTGTGATTTTAACTCCACCGATCTGAAGGACATCGAGTTTTCCAGATCACTTTACTACAACAAACTGATGCTTGTCCGCTTCAGCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATACGGATTACGTGAGGCGGACGGCTGGAATAATCAGAGTTCATATCTGGAGCAGATGAGGGATGAGAAGGAGCGATACTGTGAGCACAATATAAAGATCGGGTA--CAGCAACATTCTGTCAAAGTCCGTTGAGCCCACTGTTCGAGTGCACTCGGTGGTGCCCCCTGCTGGAGGACATCCCGCCATGTTGGTCTGCAGCGTCTACGACTTCTACCCCAGATACATCAAAGTGAGCTGGCAGAGAGATGGAAAAGAGGTCAGCCAGGATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTCTACCAGCTGCACTCTCACCTGGAGTACACGCCCAGGTCTGGAGAGAAGATCTCCTGTGTGGTGGAGCACGCCAGCCTGAAAACCCCTTTGGTCAAAGACTGGGACCCATCCATGCCTGAATCTGAGAGGAACCAGATCGCCATCGGAGCATCAGGCCTGATCCTGGGTCTGATCTTGTCTCTGGCTGGATTCATCTACTTCAAGAGAAAATCTCGAGGGAGGATCCTGGTTCCCAATAACT]

[+] EMBL BU806271             [AGCTTCACAGCAGGATGTCTTCATCATCTCTCAGAGTCTTCCTCCTCTTCATCAGCCTGTACACGGCAGGTGGATTCCAAAGTTATTCGGTGGATAGCTGTGATTTTAACTCCACCGATCTGAAGGACATCGAATATTCCAGATCACTTTACTACAGCAGAGTGATGTATGCCCGCTTCAGCAGCCGCGTGGGGAAGTTTGAGGGATACACGAAATACGGATTGCATCAGGCGGATTACTGGAATAATCAGAGTTCAATTCTGGAGCAGATGAGGGATGAGAAGGAGCGATACTGTCAGTACAATATAAAGATCTGGTA  CAGCAACATTCTGTCAAAGTCCGTGGAACCAGAGGTCATTGTGCACTCGGTGGCGCCCCCTGCTGGAGGACATCCCGCCATGTTGGTCTGCAGCGTCTACGACTTCTACCCCAAATACATCAAAGTGAGCTGGCTCAGAGATGGAGAAGAGGTCAGCCAGGATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTCTACCAGCTGCACTCTCACCTGGAGTACACGCCCAGGTCTGGAGAGAAGATCTCCTGTGTGGTGGAGCACGCCAGCCTGAAAACCCGTTTGACCAAAGACTGGGACCCATCCATGCCT                                                                                                                            ]
[+] EMBL CA846190             [cGCTTCACAGCAGGATGTCTTCATCATCTCTCAGAGTCTTCCTCCTCTTCATCAGCCTGTACACGGCAGGTGGATTTCAATATTATGTGGTGTCTCGCTGTAGTTTTAACTCCACCGATCTGAAGGACATCGAATATTCCAGATCAGTTTACTACAACAAACTGATGTATGCCCGCTTCAGCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATACGGATTATTCCAGGCGGATTACTGGAATAATCAGAGTTCAATTCTGGAGCAGGTGAGGGATAATAAGGAGCGATACTGTCAGCACAATATAAAGAACTGGTA  CAGCAACATTCTGTCAAAGTCCGTGGAGCCAGAGGTCATTGTGCACTCGGTGGTGCCCCCTGCTGGAGGACATCCCGCCATGTTGGTCTGCAGCGTCTACGACTTCTACCCCAGATACATCAAAGTGAGCTGGCAGAGAGATGGAGAAGAGGTCAGCCAGGATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTCTACCAGCTGCACTCTCACCTGGAGTACACGCCCAGGTCTGGAGAGAAGATCTCCTGTGTGGTGGAGCACGCCAGCCTGAAAACCCCTTTGGTCAAAGACTGGGACCCATCCATGCCTGAATCTGAGAGGAACCAGATCGCCATCGGAGCATCAGGCCTGATCCTGGGTCTGATCTTGTCTCTGGCTGGATTCATCTACTTCAAGAGAAAATCTCGAGGGAGGATCCTGGTTCCCAATAACT]
[+] EMBL CA588268             [  CTTTA AGCAGGATGTCTTCATCATCTCTCAGAGTCTTCCTCCTTATCATCAGCCTGTACACGGCAGGTGGATTTCAACTTTATTCGGTGGATAGCTGTGATTTTAACTCCACCGATCTGAAGGACATCGAGTTTTCCAGATCACTTTACTACAACAAACTGATGCTTGTCCGCTTCAGCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATTCGGATTACGTGTGGCGGACGGCTGGAATAATCAGAGTTCATATCTGGAGCAGATGAGGACTGCGAAGGAGCGATACTGTGAGCACAATATAAAGATCGATTA  CAGCAACATTCTGTCAAAGTCCGTTGATCCCACTGTTCGAGTGCACTCGGTGGTGCCCCCTGCTGGAGGACATCCCGCCATGTTGGTCTGCAGCGTCTACGACTTCTACCCCAGATACATCAAAGTGAGCTGGCAGAGAGATGGAAAAGAGGTCAGCCAGGATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTCTACCAGCTGCACTCTCACCTGGGGTACACGCCCAGGTCTGGAGAGAAGATCTCCTGTGTGGTGGAGCACGCCAGCCTGAAAACCCCTTTGGTCAAAGACTGGGACCCATCCATGCCTGAATCTGAGAGGAACCAGATCGCCATCGGAGCATCAGGCCTGATCCTGGGTCTGATCTCGTCTCTGGCTGGATTCATCTACTTCAAGAGAAAATCTCGAGGGAGGATC                ]
[+] EMBL CA588440             [ acccttCAGGAGGATGTCTTCATCATCTCTCAGAGTCTTCCTCC CTTAATAAGCCTGTACACGGCAGGTGGATTTCAACTTTATTCGGTGGATAGCTGTGATTTTAACTCCACCGATCTGCAGGACATCGAGTTTTCCAGATCACTTTACTACAACAAACTGATGCTTGTCCGCTTCAGCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATTCGGATTACGTGTGGCGGACGGCTGGAATAATCAGAGTTCATATCTGGAGCAGATGAGGACTGCGAAGGAGCGATACTGTGAGCACAATATAAAGATCGATTA  CAGCAACATTCTGTCAAAGTCCGTTGAGTTTTCTGTTCGAGTGCACTCGGTGGTGCCCCCTGCTGGAGGACATCCCGCCATGTTGGTCTGCAGCGTCTACGACTTCTACCCCAGATACATCAAAGTGAGCTGGCAGAGAGATGGAAAAAAGGTCAGCCAGGATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTCTACCAGCTGCACTCTCACCTGGAGTACACGCCCAGGTCTGGAGAGAAGATCTCCTGTGTGGTGGAGCACGCCAGCCTGAAAACCCCTTTGGTCAAAGACTGGGACCCATCCATGCCTGAATCTGAGAGGAACCAGATCGCCATCGGAGCATCAGGCCTGATCCTGGGTCTGATCTTGTCTCTGGCTGGATTCATCTACTTCAAGAGAAAATCTCGAGGGAGGATC                ]
[+] EMBL CA846655             [                              TCAGAGTCTTCCTCCTCTTCATCAGCCTGTACACGGCAGGTGGATTTCAACTTTATTGGGTGGATCGCTGTGATTTTAACTCCACCGATCTGAAGGACATCGAATATTCCAGATCAGTTTACTACCACAAAGTGATGTTTGCCCGCTTCCGCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAAGACGGATTGCATCAGGCGGACGGCTGGAATAATATGACTTCATATCTGGAGCAGATGAGGGATCAGAAGGAGCGATACTGTGAGCCCAATATAAAGGTCTGGTA  CAGCAACATTCTGTCAAAGTCCGTTGAGCCCACTGTTCGAGTGCACTCGGTGGTGCCCCCTGCTGGAGGACATCCCGCCGTGTTGGTCTGCAGCGTCTACGACTTCTACCCCAAATACATCAAAGTGAGCTGGCTCAGAGATGGAAAAGAGGTCAGCCAGGATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTCTACCAGCTGCACTCTCACCTGGAGTACACGCCCAGGTCTGGAGAGAAGATCTCCTGTGTGGTGGAGCACGCCAGCCTGAAAACCCGTTTGGTCAAAGACTGGGACCCATCCATGCCTGAATCT                                                                                                                      ]
[+] EMBL FR0058748            [                              TCAGAGTCTTCCTCCTCTTCATCAGCCTGTACACGGCAGGTGGATTTCAACTTTATGGGGTGGATAGCTGTGATTTTAACTCCACCGATCTGAAGGACATCGAGTTTTCCAGATCACTTTACTACAACAAACTGATGCTTGTCCGCTTCAGCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATTCGGATTACGTGTGGCGGACGGCTGGAATAATCAGAGTTCATATCTGGAGCAGATGAGGACTGCGAAGGAGCGATACTGTGAGCACAATATAAAGATCGATTA  CAGCAACATTCTGTCAAAGTCCGTTGAGCCCACTGTCCGAGTGCACTCGGTGGGGCCCC                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CA591141             [                                        CCTCCTCTTCATCAGCCTGTACACGGCAGGTGGATTTCAACTTTATTCGGTGGATAGCTGTGATTTTAACTCCACCGATCTGAAGGACATCGAGTTTTCCAGATCACTTTACTACAACAAACTGATGCTTGTCCGCTTCAGCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATTCGGATTACGTGTGGCGGACGGCTGGAATAATCAGAGTTCATATCTGGAGCAGATGAGGACTGCGAAGGAGCGATACTGTGAGCACAATATAAAGATCGATTA  CAGCAACATTCTGTCAAAGTCCGTTGAGCCCACTGTTCGGGTGCACTCGGTGGTGCCCCCTGCTGGAGGACATCCCGCCATGTTGGTCTGCAGCGTCTACGACTTCTACCCCAGATACATCAAAGTGAGCTGGCAGAGAGATGGAAAAGAGGTCAGCCAGGATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTCTACCAGCTGCACTCTCACCTGGAGTACACGCCCAGGTCTGGAGAGAAGATCTCCTGTGTGGTGGAGCACGCCAGCCTGAAAACCCCTTTGGTCTAAGACTGGGACC                                                                                                                                       ]
[+] EMBL FR0058402            [                                            CTCTTCATCAGCCTGTACACGGCAGGTGGATTTCAACTTTATTCGGTGGATAGCTGTGATTTTAACTCCACCGATCTGAAGGACATCGAGTTTTCCAGATCACTTTACTACAACAAACTGATGCTTGTCCGCTTCAGCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATTCGGATTACGTGTGGCGGACGGCTGGAATAATCAGAGTTCATATCTGGAGCAGATGAGGACTGCGAAGGAGCGATACTGTGAGCACAATATAAAGATCGATTA  CAGCAACATTCTGTCAAAGTCCGTTGAGCCCACTGTCCGAGTGCACTCGGTGGTGCCCCCTGCTGGAGGACATCCCGCCATGTTGGTCTGCAGCGTCTACGACTTCTACCCCAGATACATCAAAGTGAGCTGGCAAAGAGATGGAAAAGAGGTCAGCCAGGATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTC                                                                                                                                                                                                                                                 ]
[+] EMBL FR0062970            [                                                               CGGCAGGTGGATTTCAATATTATTGGGGGTCTCGCTGTAGGTTTAACTCCACCGATCTGAAGGACATCGAGTTCACCAGATCACTTTACTACCACAAAGTGATGTTTGCCCGCTTCCGCAGCAGCGTGGGGAAGTTTGAGGGATTCACGAAAGACGGAATGCATCAGGCGGACGGCTGGAATAATCAGAGTTCATTTATGGAGCAGATGAGGGATGAGAAGGAGCGATACTGTGAGCACAATATAAAGATCTGGTA  CAGCAACATTCTGTCAGAGGCCGTTGAGCCCA                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CA844799             [                                                                                                         TTAACTCCACCGATCTGAAGGACATCGAATATTCCAGATCACATTACTACAACAAACTGATGTATGTCCGCTTCCGCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAAGACGGATTGATTCAGGCGGATTACTGGAATAATATCAGTTCATATCTGGAGCAGATGAGGGATGAGAAGGAGCGATACTGTGAGCCCAATATAAAGGTCTGGTATCTTTTTACATTCTGTCAAAGTCCGTTGAGCCCACTGTTCGAGTGCACTCGGTGGTGCCCCCTGCTGGAGGACATCCCGCCGTGTTGGTCTGCAGCGTCTACGACTTCTACCCCAGATACATCAAAGTGAGCTGGCAGAGAGATGGAGAAGAGGTCAGCCAGGATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTCTACCAGCTGCACTCTCACCTGGAGTACACGCCCAGGTCTGGAGAGAAGATCTCCTGTGTGGTGGAGCACGCC                                                                                                                                                                         ]
[+] EMBL CA846850             [                                                                                                                                                                                                                                                                                                                                                                           GCACTCGGTGGTGCCCCCTGCTGGAGGACATTCCGCCGCGTTGGTCTGCAGCGTCTACGACTTCTACCCCAGATACATCAAAGTGAGCTGGCAGAGAGATGGAGAAGAGGTCAGCCAGGATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTCTACCAGCTGCACTCTCACCTGGAGTACACGCCCAGGTCTGGAGAGAAGATCTCCTGTGTGGTGGAGCACGCCAGCCTGATTACCCGTTTGGTCAAAGACTGGGACCCATCCATGCCTGAATCTGAGAGGAACCAGATCGCCCTCGGAGCATCAGGCCTGATCCTGGGCCTGATCTTGTCTCGGGCTGGATTCATCTAC                                           ]


>consensus_2691#0 AGCTTCACAGCAGGATGTCTTCATCATCTCTCAGAGTCTTCCTCCTCTTCATCAGCCTGT ACACGGCAGGTGGATTTCAACTTTATTCGGTGGATAGCTGTGATTTTAACTCCACCGATC TGAAGGACATCGAGTTTTCCAGATCACTTTACTACAACAAACTGATGCTTGTCCGCTTCA GCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATACGGATTACGTGAGGCGGACGGCT GGAATAATCAGAGTTCATATCTGGAGCAGATGAGGGATGAGAAGGAGCGATACTGTGAGC ACAATATAAAGATCGGGTACAGCAACATTCTGTCAAAGTCCGTTGAGCCCACTGTTCGAG TGCACTCGGTGGTGCCCCCTGCTGGAGGACATCCCGCCATGTTGGTCTGCAGCGTCTACG ACTTCTACCCCAGATACATCAAAGTGAGCTGGCAGAGAGATGGAAAAGAGGTCAGCCAGG ATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTCTACCAGCTGCACTCTCACC TGGAGTACACGCCCAGGTCTGGAGAGAAGATCTCCTGTGTGGTGGAGCACGCCAGCCTGA AAACCCCTTTGGTCAAAGACTGGGACCCATCCATGCCTGAATCTGAGAGGAACCAGATCG CCATCGGAGCATCAGGCCTGATCCTGGGTCTGATCTTGTCTCTGGCTGGATTCATCTACT TCAAGAGAAAATCTCGAGGGAGGATCCTGGTTCCCAATAACT



consensusID : consensus_2691#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 219
fasta sequence
                              [GTGGGGTTCAATATTATGTGGTGTCTCGCTGTAGTTTTAACTCCACCGATCTGAAGGACATCGAATATTCCAGATCAGGTTACTACAACAAACTGATGTATGCCCGCTTCAGCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATACGGATTATTCCAGGCGGATTACTGGAATAATCAGAGTTCAATTCTGGAGCAGATGAGGGATAATAAGGAGC]

[+] EMBL FR0061315            [GTGGGGTTCAATATTATGTGGTGTCTCGCTGTAGTTTTAACTCCACCGATCTGAAGGACATCGAATATTCCAGATCAGGTTACTACAACAAACTGATGTATGCCCGCTTCAGCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATACGGATTATTCCAGGCGGATTACTGGAATAATCAGAGTTCAATTCTGGAGCAGATGAGGGATAATAAGGAGC]


>consensus_2691#1 GTGGGGTTCAATATTATGTGGTGTCTCGCTGTAGTTTTAACTCCACCGATCTGAAGGACA TCGAATATTCCAGATCAGGTTACTACAACAAACTGATGTATGCCCGCTTCAGCAGCAGCG TGGGGAAGTTTGAGGGATACACGAAATACGGATTATTCCAGGCGGATTACTGGAATAATC AGAGTTCAATTCTGGAGCAGATGAGGGATAATAAGGAGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2691#0      AGCTTCACAGCAGGATGTCTTCATCATCTCTCAGAGTCTTCCTCCTCTTCATCAGCCTGT 60
consensus_2691#1      ------------------------------------------------------------
                                                                                  

consensus_2691#0      ACACGGCAGGTGGATTTCAACTTTATTCGGTGGATAGCTGTGATTTTAACTCCACCGATC 120
consensus_2691#1      ---------GTGGGGTTCAATATTATGTGGTGTCTCGCTGTAGTTTTAACTCCACCGATC 51
                               ****  *****  ****  ****  * *****  *****************

consensus_2691#0      TGAAGGACATCGAGTTTTCCAGATCACTTTACTACAACAAACTGATGCTTGTCCGCTTCA 180
consensus_2691#1      TGAAGGACATCGAATATTCCAGATCAGGTTACTACAACAAACTGATGTATGCCCGCTTCA 111
                      ************* * **********  *******************  ** ********

consensus_2691#0      GCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATACGGATTACGTGAGGCGGACGGCT 240
consensus_2691#1      GCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATACGGATTATTCCAGGCGGATTACT 171
                      ********************************************    *******   **

consensus_2691#0      GGAATAATCAGAGTTCATATCTGGAGCAGATGAGGGATGAGAAGGAGCGATACTGTGAGC 300
consensus_2691#1      GGAATAATCAGAGTTCAATTCTGGAGCAGATGAGGGATAATAAGGAGC------------ 219
                      *****************  ******************* * *******            

consensus_2691#0      ACAATATAAAGATCGGGTACAGCAACATTCTGTCAAAGTCCGTTGAGCCCACTGTTCGAG 360
consensus_2691#1      ------------------------------------------------------------
                                                                                  

consensus_2691#0      TGCACTCGGTGGTGCCCCCTGCTGGAGGACATCCCGCCATGTTGGTCTGCAGCGTCTACG 420
consensus_2691#1      ------------------------------------------------------------
                                                                                  

consensus_2691#0      ACTTCTACCCCAGATACATCAAAGTGAGCTGGCAGAGAGATGGAAAAGAGGTCAGCCAGG 480
consensus_2691#1      ------------------------------------------------------------
                                                                                  

consensus_2691#0      ATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTCTACCAGCTGCACTCTCACC 540
consensus_2691#1      ------------------------------------------------------------
                                                                                  

consensus_2691#0      TGGAGTACACGCCCAGGTCTGGAGAGAAGATCTCCTGTGTGGTGGAGCACGCCAGCCTGA 600
consensus_2691#1      ------------------------------------------------------------
                                                                                  

consensus_2691#0      AAACCCCTTTGGTCAAAGACTGGGACCCATCCATGCCTGAATCTGAGAGGAACCAGATCG 660
consensus_2691#1      ------------------------------------------------------------
                                                                                  

consensus_2691#0      CCATCGGAGCATCAGGCCTGATCCTGGGTCTGATCTTGTCTCTGGCTGGATTCATCTACT 720
consensus_2691#1      ------------------------------------------------------------
                                                                                  

consensus_2691#0      TCAAGAGAAAATCTCGAGGGAGGATCCTGGTTCCCAATAACT 762
consensus_2691#1      ------------------------------------------
                                                                




Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)