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Takifugu rubripes
cluster # 2719 cluster # 2719       Sequences # 14       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2719#0 length = 610 sequences # 2  
consensus_2719#1 length = 588 sequences # 12  

consensusID : consensus_2719#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 610
fasta sequence
                              [CCAAACGGGGGGGAACATAGAGGCGAAACCATGGCGAAGACGGGGGTCGCGGACTCAAAGATAGCGGCCATCGAACCGCTCGGTAATCACTTTTGTGAACGGATGAGCGAGGAACAGTGGCGGATGCTGAAAACAGGGGCCCCCGACGCCGGCAGTAGAATCCAGATAGCTGAGCTGGGCCTGGGAATGATCAAAGATCTGACAACCAACGTGCTCACGGGTCTGGGAGCACCTGAAGCTCCACAGGATGGACAGCGTCCAGTCCAAATGTCTGACGACGCTGATCACCAAGGAGGTGTCGGAGAGCATCACGTCTTCTCTCTGTGAATCCAGCTCCTCCTCGTCTTTGCTGGAACTCAAGCACCGCATCGTCAACCCCTACAGGCTCAACGCCATGGTCACGCACGCCGCCAACATGTTCAACAACATGAAGATCAAGATGAAAGCCCTGTTTCTGCGGCGGCGGCTCGTCCGCCTGAGCGACGGCCAAGACGTCCCCGAGCCACCGGAGAAGGACGACCGGCGTGACGAGAGCTCCAGGACGGCGGCGTCCCTGAGGAGCACGGTGTCCAAGATGTCCGAGAGTCTCCACAGTGAAATCCGAAACGTG]

[+] EMBL CA590576             [CCAAACGGACCAGAACATAGAGGCGAAACCATGGCGATGACGTGGTTCGCGGACTCAAAGATAGCGTCCATCGAACCGCTCGTTAATCACTTTTGTGAACGGATGAGCGAGGAACAGTGGCGGCTGCTGAAATCAGGGGCCCCCGACGCCGCCAGTAGAATCCAGATCGCTGAGCTGGTCCTGGGAATGATCAAAGTTCTGACAACCAACGTGCTCACGGCTCT GGAGCACCTGAAGCTCCACAGGATGGACAGCGTCCAGTCCAAATGTCTGACGACGCTGATCACCAAGGAGGTGTCGGAGAGCATCACGTCTTCTCTCTGTGAATCCAGCTCCTCCTCGTCTTTGCTGGAACTCAAGCACCGCATCGTCAACCCCTACAGGCTCAACGCCATGGTCACGCACGCCGCCAACATGTTCAACAACATGAAGATCAAGATGAAAGCCCTGTTTCTGCGGCGGCGGCTCGTCCGCCTGAGCGACGGCCAAGACGTCCCCGAGCCACCGGAGAAGGACGACCGGCGTGACGAGAGCTCCAGGACGGCGGCGTCCCTGAGGAGCACGGTGTCCAAGATGTCCGAGAGTCTCCACAGTGAAATCCGAAACGTG]
[+] EMBL FR0060451            [       aGGGGGAACATAGAGGCGAAACCATGGCGCACACGGGGGTCGCGGACTCAAAGATAGCGGTCATCGAACCGCTCGGTAATCACTTTTGTGAACGGATGAGCGAGGAACAGTGGTGGATGCTGAAAACAGGGGCCCCCGACGCCGGCAGTAGAATCCAGATAGCTGAGCTGTGCCTGGGAATGATCAAAGATCTGACATCCAATGTGCTCACGGGTCTGGGAGCA                                                                                                                                                                                                                                                                                                                                                                                           ]


>consensus_2719#0 CCAAACGGGGGGGAACATAGAGGCGAAACCATGGCGAAGACGGGGGTCGCGGACTCAAAG ATAGCGGCCATCGAACCGCTCGGTAATCACTTTTGTGAACGGATGAGCGAGGAACAGTGG CGGATGCTGAAAACAGGGGCCCCCGACGCCGGCAGTAGAATCCAGATAGCTGAGCTGGGC CTGGGAATGATCAAAGATCTGACAACCAACGTGCTCACGGGTCTGGGAGCACCTGAAGCT CCACAGGATGGACAGCGTCCAGTCCAAATGTCTGACGACGCTGATCACCAAGGAGGTGTC GGAGAGCATCACGTCTTCTCTCTGTGAATCCAGCTCCTCCTCGTCTTTGCTGGAACTCAA GCACCGCATCGTCAACCCCTACAGGCTCAACGCCATGGTCACGCACGCCGCCAACATGTT CAACAACATGAAGATCAAGATGAAAGCCCTGTTTCTGCGGCGGCGGCTCGTCCGCCTGAG CGACGGCCAAGACGTCCCCGAGCCACCGGAGAAGGACGACCGGCGTGACGAGAGCTCCAG GACGGCGGCGTCCCTGAGGAGCACGGTGTCCAAGATGTCCGAGAGTCTCCACAGTGAAAT CCGAAACGTG



consensusID : consensus_2719#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 588
fasta sequence
                              [ACGCAGCGTCAGATCCAAACGGACCAGAACATAGAGGCGAAACCATGGCGATGACGTGGTTCGCGGACTCAAAGATAGCGTCCATCGAACCGCTCGTTAATCACTTTTGTGAACGGATGAGCGAGGAACAGTGGCGGCTGCTGAAATCAGGGGCCCCCGACGCCGCCAGTAGAATCCAGATCGCTGAGCTGGTCCTGGGAATGATCAAAGTTCTGACAACCAACGTGCTCACGGCTCTGGAGCACCTG-AAGCTCCACAGGTCCGAGGAGGAACTCTTGGACAGCCTGAATGAGGTCATCACTCAGATTTCTCACCAGACGTTGTCC-TTCCCCGATAGGATGGACAGCGTCCAGTCCAAATGTCTGACGACGCTGATCACCAAGGAGGTGTCGGAGAGCATCACGTCTTCTCTCTGTGAATCCAGCTCCTCCTCGTCTTTGCTGGAACTCAAGCACCGCATCGTCAACCCCTACAGGCTCAACGCCATGGTCACGCACGCCGCCAACATGTTCAACAACATGAAGATCAAGATGAAAGCCCTGTTTCTGCGGCGGCGGCTCGTCCGCCTGAGCGACGGCCAAGACGTCC]

[+] EMBL CA590507             [ACGCAGCGTCAGATCCAAACGGACCAGAACATAGAGGCGAAACCATGGCGATGACGTGGTTCGCGGACTCAAAGATAGCGTCCATCGAACCGCTCGTTAATCACTTTTGTGAACGGATGAGCGAGGAACAGTGGCGGCTGCTGAAATCAGGGGCCCCCGACGCCGCCAGTAGAATCCAGATCGCTGAGCTGGTCCTGGGAATGATCAAAGTTCTGACAACCAACGTGCTCACGGCTCTGGAGCACCTG AAGCCCCACAGGTCCGAGGAGGAACTCTTGGACAGCCTGAATGAGGTCATCACTCAGATTTCTCACCAGACGTTGTCC TTCCCCGATAGGATGGACAGCGTCCAGTCCAAATGTCTGACGACGCTGATCACCAAGGAGGTGTCGGAGAGCATCACGTCTTCTCTCTGTGAATCCAGCTCCTCCTCGTCTTTGCTGGAACTCAAGCACCGCATCGTCAACCCCTACAGGCTCAACGCCATGGTCACGCACGCCGCCAACATGTTCAACAACATGAAGATCAAGATG                                                       ]
[+] EMBL CA590644             [              CCAAACGGACCAGAACATAGAGGCGAAACCATGGCGATGACGTGGTTCGCGGACTCAAAGATAGCGTCCATCGAACCGCTCGTTAATCACTTTTGTGAACGGATGAGCGAGGAACAGTGGCGGCTGCTGAAATCAGGGGCCCCCGACGCCGCCAGTAGAATCCAGATCGCTGAGCTGGTCCTGGGAATGATCAAAGTTCTGACAACCAACGTGCTCACGGCTCTGGAGCACCTG AAGCTCCACAGGTCCGAGGAGGAACTCTTGGACAGCCTGAATGAGGTCATCACTCAGATTTCTCACCAGACGTTGTCC TTCCCCGATAGGATGGACAGCGTCCAGTCCAAATGTCTGACGACGCTGATCACCAAGGAGGTGTCGGAGAGCATCACGTCTTCTCTCTGTGAATCCAGCTCCTCCTCGTCTTTGCTGGAACTCAAGCACCGCATCGTCAACCCCTACAGGCTCAACGCCATGGTCACGCACGCCGCCAACATGTTCAACAACATGAAGATCAAGATGAAAGCCCTGTTTCTGCGGCGGCGGCTCGTCCGCCTGAGCGACGGCCAAGACGTCC]
[+] EMBL CA590342             [              CCAAACGGACCAGAACATAGAGGCGAAACCATGGCGATGACGTGGTTCGCGGACTCAAAGATAGCGTCCATCGAACCGCTCGTTAATCACTTTTGTGAACGGATGAGCGAGGAACAGTGGCGGCTGCTGAAATCAGGGGCCCCCGACGCCGCCAGTAGAATCCAGATCGCTGAGCTGGTCCTGGGAATGATCAAAGTTCTGACAACCAACGTGCTCACGGCTCTGGAGCACCTG AAGCTCCACAGGTCCGAGGAGGAACTCTTGGACAGCCTGAATGAGGTCATCACTCAGATTTCTCACCAGACGTTGTCC TTCCCCGATAGGATGGACAGCGTCCAGTCCAAATGTCTGACGACGCTGATCACCAAGGAGGTGTCGGAGAGCATCACGTCTTCTCTCTGTGAATCCAGCTCCTCCTCGTCTTTGCTGGAACTCAAGCACCGCATCGTCAACCCCTACAGGCTCAACGCCATGGTCACGCACGCCGCCAACATGTTCAACAACATGAAGATCAAGATGAAAGCCCTGTTTCTGCGGCGGCGGCTCGTCCGCCTGAGCGACGGCCAAGACGTC ]
[+] EMBL CA333146             [              CCAAACGGACCAGAACATAGAGGCGAAACCATGGCGATGACGTGGTTCGCGGACTCAAAGATAGCGTCCATCGAACCGCTCGTTAATCACTTTTGTGAACGGATGAGCGAGGAACAGTGGCGGCTGCTGAAATCAGGGGCCCCCGACGCCGCCAGTAGAATCCAGATCGCTGAGCTGGTCCTGGGAATGATCAAAGTTCTGACAACCAACGTGCTCACGGCTCTGGAGCACCTG AAGCTCCACAGGTCCGAGGAGGAACTCTTGGACAGCCTGAATGAGGTCATCACTCAGATTTCTCACCAGACGTTGTCC TTCCCCGATAGGATGGACAGCGTCCAGTCCAAATGTCTGACGACG                                                                                                                                                                                                                         ]
[+] EMBL FR0060342            [                                    GCGAAACCATGGCGATGACGTGGTTCGCGGACTCAAAGATAGCGTCCATCGAACCGCTCGTTAATCACTTTTGTGAACGGATGAGCGAGGAACAGTGGCGGCTGCTGAAATCAGGGGCCCCCGACGCCGCCAGTAGAATCCAGATCGCTGAGCTGGTCCTGGGAATGATCAAAGTTCTGACAACCAACGTGCTCACGGCTCTGGAGCACCTG AAGCTCCACAGGTCCGAGGAGGAACTCTTGGACAGCCTGAATGAGGTCATCACTCAGATTTCTCACCAGACGTTGTCC TTCCCCGATAGGATGGACAGCGTCCAGTCCAAATGTCTGACGACGCTGATCACCAAGGAGGTGTCGGAGAGCATCACGTCTTCTCTCTGTGAATCCAGCTCCTCCTCGTCTTTGCTGGAACTCAAGCACCG                                                                                                                                   ]
[+] EMBL FR0060808            [                                            ATGGCGATGACGTGGTTCGCGGACTCAAAGATAGCGTCCATCGGACCGCTCGTTAATCACTTTTGTGAACGGATGAGCGAGGAACAGTGGCGGCTGCTGAAATCAGGGGCCCCCGACGCCGCCAGTAGAATCCAGATCGCTGAGCTGGTCCTGGGAATGATCAAAGTTCTGACAACCAACGTGCTCACGGCTCTGGAGCACCTG AAGCTCCACAGGTCCGAGGAGGAACTCTTGGACAGCCTGAATGANGGCATCACTCAGATTTCTCACCAGACGTTGTCC TTCCCCGATAGGATGGACAGCGTCCAGTCCAAATGTCTGACGACGCTGATCACCAAGGAGGGG                                                                                                                                                                                                       ]
[+] EMBL FR0060132            [                                                  ATGACGTGGTTCGCGGACTCAAAGATAGCGTCCATCGAACCGCTCGTTAATCACTTTTGTGAACGGATGAGCGAGGAACAGTGGCGGCTGCTGAAATCAGGGGCCCCCGACGCCGCCAGTAGAATCCAGATCGCTGAGCTGGTCCTGGGAATGATCAAAGTTCTGACAACCAACGTGCTCACGGCTCTGGAGCCCCTG AAGCTCCACAGGTCCGAGGAGGAACTCTTGGACAGCCTGAATGAGGGCATCACTCAGATTTCTCACCAGACGNTGTCC TTCCCCGATAGGATGGACAGCGTCCAGTCC                                                                                                                                                                                                                                        ]
[+] EMBL FR0060236            [                                                        TGGTTCGCGGACTCAAAGATAGCGTCCATCGAACCGCTCGTTAATCACTTTTGTGAACGGATGAGCGAGGAACAGTGGCGGCTGCTGAAATCAGGGGCCCCCGACGCCGCCAGTAGAATCCAGATCGCTGAGCTGGTCCTGGGAATGATCAAAGTTCTGACAACCAACGTGCTCACGGCTCTGGAGCACCTG AAGCTCCACAGGTCCGAGGAGGAACTCTTGGACAGCCTGAATGAGGTCATCACTCAGATTTCTCACCAGACGTTGTCCTTTCCCCGATA                                                                                                                                                                                                                                                            ]
[+] EMBL FR0060899            [                                                                      AAAGATAGCGTCCATCGAACCGCTCGTTAATCACTTTTGAGAACGGATGAGCGAGGAACAGTGGCGGCTGCTGAAATCAGGGGCCCCCGACGCCGCCAGTAGAATCCAGATCGCTGAGCTGGTCCTGGGAATGATCAAAGTTCTGACAACCAACGTGCTCACGGCTCTGGAGCACCTG AAGCTCCACAGGTCCGAGGAGGAACTCTTGGACAGCCTGAATGAGGTCATCACTCAGATTTCTCACCAGACGTTGTCC TTCCCCGATAGGATGGACAGCGGCCAGTCCAAATGTCTGACGACGCTGAACACCAGGGAGGGGGCG                                                                                                                                                                                                    ]
[+] EMBL FR0060931            [                                                                      AAAGAGAGCGTCCATCGAACCGCTCGTTAATCACTTTTGTGAACGGATGAGCGAGGAACAGTGGCGGCTGCTGAAATCAGGGGCCCCCGACGCCGCCAGTAGAATCCAGATCGCTGAGCTGGTCCTGGGAATGATCAAAGTTCTGACAACCAACGTGCTCACGGCTCTGGAGCACCTG AAGCTCCACAGGTCCGAGGAGGAACTCTTGGACAGCCTGAATGAGGTCATCACTCAGATTTCTCACCAGACGTTGTCC TTCCCCGATAGGATGGACAGCGTCCAGTCCAAATGTCTGACGACGCTGATCACCAAGGAGG                                                                                                                                                                                                         ]
[+] EMBL BU807583             [                                                                          ATAGCGTCCATCGAACCGCTCGTTAATCACTTTTGTGAACGGATGAGCGAGGAACAGTGGCGGCTGCTGAAATTAGGGGCCCCCGACGCCGCCAGTAGAATCCAGATCGCTGAGCTGGTCCTGGGAATGATCAAAGTTCTGACAACCAACGTGCTCACGGCTCTGGAGCACCTGTTAGCTCCACAGGTCCGAGGAGGAACTCTTGGACAGCCTGAATGAGGTCATCACTCAGATTTCTCTCCAGACGTTGTCC TTCCCCGATAGGATGGACAGCGTCCAGTCCAAATGTCTGACGACGCTGATCACCAAGGAGGTGTCGGAGAGCATCACGTCTTCTCTCTGTGAATCCAGCTCCTCCTCGTCTTTGCTGGAACTCAAGCACCGCATCGTCAACCCCTACAGGCTCAACGCCATGGTCACGCACG                                                                                          ]
[+] EMBL FR0060105            [                                                                                   ATCGAACCGCTCGTTAATCACTTTTGTGAACGGATGAGCGAGGAACAGTGGCGGCTGCTGAAATCAGGGGCCCCCGACGCCGCCAGTAGAATCCAGATCGCTGAGCTGGTCCTGGGAATGATCAAAGTTCTGACAACCAACGTGCTCACGGCTCTGGAGCCCCTG AAGCTCCACAGGTCCGAGGAGGAACTCTTGGACAGCCTGAATGAGGTCATCACTCAGATTTCTCACCAGACGTTGCCC TTCCCCGATAGGAAGGACAGCGTCCAGTCCAAATGTCTGACGACGCTGATCACCAAGGAGGTGGCGGAGAGCATCACGTCTT                                                                                                                                                                                    ]


>consensus_2719#1 ACGCAGCGTCAGATCCAAACGGACCAGAACATAGAGGCGAAACCATGGCGATGACGTGGT TCGCGGACTCAAAGATAGCGTCCATCGAACCGCTCGTTAATCACTTTTGTGAACGGATGA GCGAGGAACAGTGGCGGCTGCTGAAATCAGGGGCCCCCGACGCCGCCAGTAGAATCCAGA TCGCTGAGCTGGTCCTGGGAATGATCAAAGTTCTGACAACCAACGTGCTCACGGCTCTGG AGCACCTGAAGCTCCACAGGTCCGAGGAGGAACTCTTGGACAGCCTGAATGAGGTCATCA CTCAGATTTCTCACCAGACGTTGTCCTTCCCCGATAGGATGGACAGCGTCCAGTCCAAAT GTCTGACGACGCTGATCACCAAGGAGGTGTCGGAGAGCATCACGTCTTCTCTCTGTGAAT CCAGCTCCTCCTCGTCTTTGCTGGAACTCAAGCACCGCATCGTCAACCCCTACAGGCTCA ACGCCATGGTCACGCACGCCGCCAACATGTTCAACAACATGAAGATCAAGATGAAAGCCC TGTTTCTGCGGCGGCGGCTCGTCCGCCTGAGCGACGGCCAAGACGTCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2719#0      --------------CCAAACGGGGGGGAACATAGAGGCGAAACCATGGCGAAGACGGGGG 46
consensus_2719#1      ACGCAGCGTCAGATCCAAACGGACCAGAACATAGAGGCGAAACCATGGCGATGACGTGGT 60
                                    ********    ************************* **** ** 

consensus_2719#0      TCGCGGACTCAAAGATAGCGGCCATCGAACCGCTCGGTAATCACTTTTGTGAACGGATGA 106
consensus_2719#1      TCGCGGACTCAAAGATAGCGTCCATCGAACCGCTCGTTAATCACTTTTGTGAACGGATGA 120
                      ******************** *************** ***********************

consensus_2719#0      GCGAGGAACAGTGGCGGATGCTGAAAACAGGGGCCCCCGACGCCGGCAGTAGAATCCAGA 166
consensus_2719#1      GCGAGGAACAGTGGCGGCTGCTGAAATCAGGGGCCCCCGACGCCGCCAGTAGAATCCAGA 180
                      ***************** ******** ****************** **************

consensus_2719#0      TAGCTGAGCTGGGCCTGGGAATGATCAAAGATCTGACAACCAACGTGCTCACGGGTCTGG 226
consensus_2719#1      TCGCTGAGCTGGTCCTGGGAATGATCAAAGTTCTGACAACCAACGTGCTCACGGCTCTGG 240
                      * ********** ***************** *********************** *****

consensus_2719#0      GAGCACCTGAAGCTCCACAGG--------------------------------------- 247
consensus_2719#1      -AGCACCTGAAGCTCCACAGGTCCGAGGAGGAACTCTTGGACAGCCTGAATGAGGTCATC 299
                       ********************                                       

consensus_2719#0      ---------------------------------------ATGGACAGCGTCCAGTCCAAA 268
consensus_2719#1      ACTCAGATTTCTCACCAGACGTTGTCCTTCCCCGATAGGATGGACAGCGTCCAGTCCAAA 359
                                                             *********************

consensus_2719#0      TGTCTGACGACGCTGATCACCAAGGAGGTGTCGGAGAGCATCACGTCTTCTCTCTGTGAA 328
consensus_2719#1      TGTCTGACGACGCTGATCACCAAGGAGGTGTCGGAGAGCATCACGTCTTCTCTCTGTGAA 419
                      ************************************************************

consensus_2719#0      TCCAGCTCCTCCTCGTCTTTGCTGGAACTCAAGCACCGCATCGTCAACCCCTACAGGCTC 388
consensus_2719#1      TCCAGCTCCTCCTCGTCTTTGCTGGAACTCAAGCACCGCATCGTCAACCCCTACAGGCTC 479
                      ************************************************************

consensus_2719#0      AACGCCATGGTCACGCACGCCGCCAACATGTTCAACAACATGAAGATCAAGATGAAAGCC 448
consensus_2719#1      AACGCCATGGTCACGCACGCCGCCAACATGTTCAACAACATGAAGATCAAGATGAAAGCC 539
                      ************************************************************

consensus_2719#0      CTGTTTCTGCGGCGGCGGCTCGTCCGCCTGAGCGACGGCCAAGACGTCCCCGAGCCACCG 508
consensus_2719#1      CTGTTTCTGCGGCGGCGGCTCGTCCGCCTGAGCGACGGCCAAGACGTCC----------- 588
                      *************************************************           

consensus_2719#0      GAGAAGGACGACCGGCGTGACGAGAGCTCCAGGACGGCGGCGTCCCTGAGGAGCACGGTG 568
consensus_2719#1      ------------------------------------------------------------
                                                                                  

consensus_2719#0      TCCAAGATGTCCGAGAGTCTCCACAGTGAAATCCGAAACGTG 610
consensus_2719#1      ------------------------------------------
                                                                




Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)