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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2739#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 961 fasta sequence
[GGCCAAAAAGCTTGGGACGGGGCCCCCCCCCGGGGTTTT-----TTTTGTTTTTTNTTTTGGACCTCATGTTTTATTGTTTCTGTACAAACAGCTCCGGTTCCTCTTCACACCCGGGAAGGATACAGCATCACTCTGATCC-GGTGCCCCATGGCCTTGGCTGGGAGGTTGCTGCTGAACTTGGCTCGGACCATCCCGCTGCTGCCGTGGGCCCGGGTCACCTTCCCCCAGAT--CACTCTGGTCTTGTTGGGTTTCCCACCCGGCGTCACCGTGTTCTTCTTGGCCTTGTAGACGTAGGCGCAGCGCTTGCCCAGGTAGAAGTCCACCT-CGTCGCGGGTGTAGCAGCCCTCCACCTTCAGCAGCGCCGTGTGCTCCCGCTGGTTCCGCAGACCACGTTTGTAGCCGGCGAAGATGGCTTTGGACCACAGTCTTCCAGGCATTGCGAGTCTTCTCCAGGTGAGTCCACCGTCACTCAGAGGAAAATGGCGGAAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATAATCTCTTCTTTATTTTCACGTTTTTGTTACAAAGAAATCTGCGGTTTAAGAAAAAATATGTTTAGATTTACCAACTCGATATTCCCTCGTTATTTATTACAATCTTCAAATAAAAATCTGAACTTAATACAACAAAGCATAAAGCTAATTTCTTTAAATTCTGTGCAGCCTAAAATAAAAACTAATAACATTAATATTATAAGAGCATTTCATATCATACATCGTTATAAAATATGACAATAATAAGAAATATGGCCTTTGACGTATCCCCACACTTGCTGGTCAACAGCTCCCCTACTGGCAGAGTCTGGAACTGCAGTTCAACTCAGTACAGCTTTTTGAGTTCACGCACACACGCAACATTTATATGAAAATCATTTTAAAGGATTCAGAAGCCCTTAAAATTATATTTTAAAAAACAAGGATGACATAAAGGA]
[-] EMBL FR0055923 [GGCCAAAAAGTTTGGGACGGGGCCCCCCCCCGGGGTTTTTTGTCTTTTGTTTTTTTTTTTGGACCTCATGTTTTATTGTTTCTGTACAAACAGCTCCGGTTCCTCTTCACACCCGGGAAGGATACAGCATCACTCTGATCC GGTGCCCCATGGCCTTGGCTGGGAGGTTGCTGCTGAACTTGGCTCGGACCATCCCGCTGCTGCCGTGGGCCCGGGTCACCTTCCCCCAGAT CACTCTGGTCTTGTTGGGTTTCCCACCCGGCGTCACCGTGTTCTTCTTGGCCTTGTAGACGTAGGCGCAGCGCTTGCCCAGGTAGAAGTCCACCT CGTCGCGGGTGTAGCAGCCCTCCACCTTCA ]
[-] EMBL FR0056914 [ AAACTTGGGACCGGGGCCCCCCCCGGGGTTTT TTTT TTTTTTNTTTTGGACCTCATGTTTTATTGTTTCTGTACAAACAGCTCCGGTTCCTCTTCACACCCGGGAAGGATACAGCATCACTCTGATCC GGTGCCCCATGGCCTTGGCTGGGAGGTTGCTGCTGAACTTGGCTCGGACCATCCCGCTGCTGCCGTGGGCCCGGGTCACCTTCCCCCAGAT CACTCTGGTCTTGTTGGGTTTCCCACCCGGCGTCACCGTGTTCTTCTTGGCCTTGTAGACGTAGGCGCAGCGCTTGCCCAGGTAGAAGTCCACCT CGTCGCGGGTGTAGCAGCCCTCCACCTTCAGCAGCGCCG ]
[-] EMBL FR0055925 [ GCCCCCCCCGGGGGTTTT TTTTTTTTTTTGTTTTGGACCTCATGTTTTATTGTTTCTGTACAAACAGCTCCGGTTCCTCTTCACACCCGGGAAGGATACAGCATCACTCTGATCC GGTGCCCCATGGCCTTGGCTGGGAGGTTGCTGCTGAACTTGGCTCGGACCATCCCGCTGCTGCCGTGGGCCCGGGTCACCTTCCCCCAGAT CACTCTGGTCTTGTTGGGTTTCCCACCCGGCGTCACCGTGTTCTTCTTGGCCTTGTAGACGTAGGCGCAGCGCTTGCCCAGGTAGAAGTCCACCT CGTCGCGGGTGTAGCAGCCCTCCACCTTCAGCAGCGCCGTGTGCTCCCGCTGGTTCCGCAGACCA ]
[-] EMBL CA589227 [ TTTTGGACCTCATGTTTTATTGTTTCTGTACAAACAGCTCCGGTTCCTCTTCACACCCGGGAAGGATACAGCATCACTCTGATCC GGTGCCCCATGGCCTTGGCTGGGAGGTTGCTGCTGAACTTGGCTCGGACCATCCCGCTGCTGCCGTGGGCCCGGGTCACCTTCCCCCAGATAACAATCTGGTCTTGTTGGGTTTCCCACCCGGCGTCACCGTGTTCTTCTTGGCCTTGTAGACGTAGGCGCAGCGCTTGCCCAGGTAGAAGTCCACCT CGTCGCGGGTGTAGCAGCCCTCCACCTTCAGCAGCGCCGTGTGCTCCCGCTGGTTCCGCAGACCACGTTTGTAGCCGGCGAAGATGGCTTTGGACCACAGTCTTCCAGGCATTGCGAGTCTTCTCCAGGTGAGTCCACCGTCACTCAGAG ]
[+] EMBL CA332461 [ CTCATGTTTTATTGTTTCTGTACAAACAGCTCCGGTTCCTCTTCACACCCGGGAAGGATACAGCATCACTCTGATCC GGTGCCCCATGGCCTTGGCTGGGAGGTTGCTGCTGAACTTGGCTCGGACCATCCCGCTGCTGCCGTGGGCCCGGGTCACCTTCCCCCAGAT CACTCTGGTCTTGTTGGGTTTCCCACCCGGCGTCACCGTGTTCTTCTTGGCCTTGTATACGTAGGCGCAGCGCTTGCCCAGGTAGAAGTCCACCTCCGTCGCGGGTGTAGCAGCCCTCCACCTTCAGCAGCGCCGTGTGCTCCCGCTGGTTCCGCAGACCACGTTTGTAGCCGGCGAAGATGGCTTTGGACCA ]
[-] EMBL FR0058680 [ TCATGTTTTATTGTTTCTGTACAAACAGCTCCGGTTCCTCTTCACACCCGGGAAGGATACAGCATCACTCTGATCCAGGTGCCCCATGGCCTTGGCTGGGAGGTTGCTGCTGAACTTGGCTCGGACCATCCCGCTGCTGCCGTGGGCCCGGGTCACCTTCCCCCAGAT CACTCTGGTCTTGTTGGGTTTCCCACCCGGCGTCACCGTGTTCTTCTTGGCCTTGTAGACGTAGGCGCAGCGCTTGCCCAGGTAGAAGTCCACCT CGTCGCGGGTGTAGCAGCCCTCCACCTTCAGCAGCGCCGTGTGCTCCCGCTGGTTCCGCAGCCCCCGTTTGTAGCCGGCGAA ]
[-] EMBL FR0056107 [ TGTTTCTGTACAAACAGCTCCGGTTCCTCTTCACACCCGGGAAGGATACAGCATCACTCTGATCC GGTGCCCCATGGCCTTGGCTGGGAGGTTGCTGCTGAACTTGGCTCGGACCATCCCGCTGCTGCCGTGGGCCCGGGTCACCTTCCCCCAGAT CACTCTGGTCTTGTTGGGTTTCCCACCCGGCGTCACCGTGTTCTTCTTGGCCTTGTAGACGTAGGCGCAGCGCTTGCCCAGGTAGAAGTCCACCT CGTCGCGGGTGTAGCAGCCCTCCACCTTCAGCAGCGCCGTGTGCTCCCGCTGGTTCCGCAGACCACGTTTGTAGCCGGCGAAGATGGCTTTGGACCACAGTC ]
[-] EMBL FR0055396 [ GTTCCTCTTCACACCCGGGAAGGATACAGCATCACTGTGATCC GGTGCCCCATGGCCTTGGCTGGGAGGTTCCTGCTGAACTTGGCTCGGACCATCCCGCTGCTACCGTGGGCCCGGGTCACCTTCCCCCAGAT CACTCTGGTCTTGTTGGGTTTCCCACCCGGCGTCACCGTGTTCTTCTTGGCCTTGTAGACGTAGGCGCAGCGCTTGCCCAGGTAGAAGTCCACCT CGTCGCGGGTGTAGCAGCCCTCCACCTTCAGCAGCGCCGTGTGCTCCCGCTGGTTCCGCAGACCACGTTTGTAGCCGGCGAAGATGGCTTTGGACCACAGTCTTCCAGGC ]
[-] EMBL CA330718 [ AGGATACAGCATCACTCTGATCC GGTGCCCCATGGCCTTGGCTGGGAGGTTGC ]
[-] EMBL FR0057239 [ TGGCTGGGAGGCTGCTGCTGAACTTGGCCCGGACCATCCCGCTGCTACCGTGGGCCCGGGTCACCTTCCCCCAGAT CACTCTGGTCCTGTTGGGTTTCCCACCCGGCGTCACCGTGTTCTTCTTGGCCTTGTAGACGTAGGCGCAGCGCTTGCCCAGGTAGAAGCCCACCT CGTCGCGGGTGTAGCAGCCCTCCACCTTCAGCAGCGCCGTGTGCTCCCGCTGGTTCCGCAGACCACGTTTGTAGCCGGCGAAGATCGCTTTGGTCCTCAGTCTTCCAGGCGGTG GCACCTTCTCC ]
[-] EMBL CA588623 [ GCTGCTGCCGTGGGCCCGGGTCCCCTTCCCCCAGAT CACTCTGGTCTTGTTGGGTTTCCCACCCGGCGTCACCGTGTTTTTCTTGGCCTTGTAGACGTAGGCGCAGCGCTTGCCCAGGTAGAAGTCCACCT CGTCGCGGGTGTAGCAGCCCTCCACCTTCAGCAGCGCCGTGTGCTCCCGCTGGTTCCGCAGACCACGTTTGTAGCCGGCGAAGATGGCTTTGGACCACAGTCTTCCAGGCATTGCGAGTCTTCTCCAGGTGAGTCCACCGTCACTCAGAGGAAAATGGCGGAAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATAATCTCTTCTTTATTTTCACGTTTTTGTTACAAAGAAATCTGCGGTTTAAGAAAAAATATGTTTAGATTTACCAACTCGATATTCCCTCGTTATTTATTACAATCTTCAAATAAAAATCTGAACTTAATACAACAAAGCATAAAGCTAATTTCTTTAAATTCTGTGCAGCCTAAAATAAAAACTAATAACATTAATATTATAAGAGCATTTCATATCATACATCGTTATAAAATATGACAATAATAAGAAATATGGCCTTTGACGTATCCCCACACTTGCTGGTCAACAGCTCCCCTACTGGCAGAGTCTGGAACTGCAGTTCAACTCAGTACAGCTTTTTGAGTTCACGCACACACGCAACATTTATATGAAAATCATTTTAAAGGATTCAGAAGCCCTTAAAATTATATTTTAAAAAACAAGGATGACATAAAGGA]
[-] EMBL FR0056052 [ GCTCCCGTGGGCCCGGGTCACCTTCCACCAGAT CACTCTGGTCTTGATGGGTTTCCCACCCGGCGTCACCGTGTTCTTCTTGGCCTTGTAGACGTAGGCGCAGCGCTTGCCCAGGTAGAAGTCCACCT CGTCGCGGGTGTAGCAGCCCTCCACCTTCAGCAGCGCCGTGTGCTCCCGCTGGTTCCGCAGACCACGTTTGTAGCCGGCGAAGATGG ]
[+] EMBL CA588855 [ GGGTCACCTTCCCCCAGAT CACTCTGGTCTTGTTGGGTTTCCCACCCGGCGTCACCGTGTTCTTCTTGGCCTTGTAGACGTAGGCGCAGCGCTTGCCCAGGTAGAAGTCCACCT CGTCGCGGGTGTAGCAGCCCTCCACCTTCAGCAGCGCCGTGTGCTCCCGCTGGTTCCGCAGACCACGTTTGTAGCCGGCGAAGATCGCTTT ]
[-] EMBL FR0058044 [ GCAGCGCTTGCCCAGGTAGAAGTCCACCT CGTCGCGGGTGTAGCAGCCCTCCACCTTCAGCAGCGCCGTGTGCTCCCGCTGGTTCCGCAGACCACGTTTGTAGCCGGCGAAGATGGCTTTGGACCACAGTCTTCCAGGCA ]
[-] EMBL CA846571 [ AGCCGGCGAAGATGGC AGGGACCACAGTCTTCCAGGCATTGCGAGTCTTCTCCAtt ]
clustalw multiple alignements is not computed in this case |
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |