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Takifugu rubripes
cluster # 2754 cluster # 2754       Sequences # 17       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2754#0 length = 630 sequences # 13  
consensus_2754#1 length = 622 sequences # 1  
consensus_2754#2 length = 576 sequences # 1  
consensus_2754#3 length = 339 sequences # 2  

consensusID : consensus_2754#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 630
fasta sequence
                              [TCCGCTATGCGAAATGGCGCTGTGAGCGGGGCTCGTTCAAAACACGGCCGTCCTCACCTGTTCCGGCGGTTAAAGCTGACGCGTTCGGCGCTTGGAGAGTTCGGAGATCTGCCCAGAAGCAACGGTTGGACTTTAGTGTACAGGAAGCATCTTCAAACT---GCAGCGATGGCGAAGAGGATCGCCGATAAAGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGAGGAGGCCGGAACCTTTTCCATCGCCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCAAACGCAGGAACAC-GGGCGGCGAGAC-TGACACCAGCACCACCTTCAAAGGGTTCAAGGGATTCTC-TTTGACCCCCAGCTCGGTCACAGCAGCCTTCTCCGGCATCGGGACCAGCGCGGCGTTCACAGGTGTGACCAACGGGAAGCTGCC-GTCG--TTGGGAGGAGTCTCTGCTCACGCCACAGGGCTGATGTTTAGCAGCGCCTCCTCCAGCGATGTCAAATCCAAGCAGACCAACGGCGCCACGCCTCCAAGCTCCGCCTCCTGCAGCGAGTACAACAAACAGCTGACGGCTCTGAACTGCTCCGTGCGGGACTGGATCACCAAGCACGTCAACGAC]

[+] EMBL CA845803             [TCCGCCTTGCGAAATGGCGCTGTGAGCGGGGCTCGTTCAAAACACGGCTGTCCTCACCTGTTCCGGCGGTTAAAGCTGACGCGTTCGGCGCTTGGAGAGTTCGGAGATCTGCCCAGAAGCAACGGTTGGACTTTAGTGTACAGGAAGCATCTTCAAACT   GCAGCGATGGCGAAGAGGATCGCCGATAAAGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGAGGAGGCCGGAACCTTTTCCATCGCCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCAAACGCAGGAACAC GGGCGGCGAGAC TGACACCAGCACCACCTTCAAAGGGTTCAAGGTATTCTC TTTGACCCCCAGCTCGGTCACAGCAGCCTTCTCCGGCATCGGGACCAGCGCGGCGTTCACAGGTGTGACCAACGGGAAGCTGCC GTCG  TTGGGAGGAGTCTCTGCTCACGCCACAGGGCTGATGTTTAGCAGCGCCTCCTCCAGCGATGTCAAATCCAA                                                                                                                ]
[+] EMBL CA590684             [     TATGCGAAATGGCGCTGTGAGCGGGGCTCGTTCAAAACACGGCCGTCCTCACCTGTTCCGGCGGTTAAAGCTGACGCGTTCGGCGCTTGGAGAGTTCGGAGATCTGCCCAGAAGCAACGGTTGGACTTTAGTGTACAGGAAGCATCTTCAAACT   GCAGCGATGGCGAAGAGGATCGCCGATAAAGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGAGGAGGCCGGAGCCTTTTCCATCGCCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCAAACGCAGGAACAC GGGCGGCGAGAC TGACACCAGCACCACCTTCAAAGGGTTCAAGGGATTCTC TTTGACCCCCAGCTCGGTCACAGCAGCCTTCTCCGGCATCGGGACCAGCGCGGCGTTCACAGGTGTGACCAACGGGAAGCTGCC GTCGNNTGGGGAGGAGTCTCTGCTCACGCCACAGGGCTGATGTTTAGCAGCGCCTCCTCCAGCGATGTCAAAT                                                                                                                    ]
[+] EMBL BU805993             [     TATGCGAAATGGCGCTGTGAGCGGGGCTCGTTCAAAACACGGCCGTCCTCACCTGTTCCGGCGGTTAAAGCTGACGCGTTCGGCGCTTGGAGAGTTCGGAGATCTGCCCAGAAGCAACGGTTGGACTTTAGTGTACAGGAAGCATCTTCAAACT   GCAGCGATGGCGAAGAGGATCGCCGATAAAGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGAGGAGGCCGGAACCTTTTCCATCGCCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCAAACGCAGGAACAC GGGCGGCGAGAC TGACACCAGCACCACCTTCAAAGGGTTCAAGGGATTCTC TTTGACCCCCAGCTCGGTCACAGCAGCCTTCTCCGGCATCGGGACCAGCGCGGCGTTCACAGGTGTGACCAACGGGAAGCTGCCNGTCG  TTGGGAGGAGTCTCTGCTCACGCCGCANGGCTGATGTTTAGCAGCGCCTCCTCCAGCGATGTCAAATCCAAGCAGACCAACGGCGCCACGCCTCCAAGCTCCGCCTCCTGCAGCGAGTACAACAAACAGCTGACGGCTCTGAA                                        ]
[+] EMBL BU807622             [             ATGGCGCTGTGAGCGGGGCTCGTTCAAAACACGGCCGTCCTCACCTGTTCCGGCGGTTAAAGCTGACGCGTTCGGCGCTTGGAGAGTTCGGAGATCTGCCCAGAAGCAACGGTTGGACTTTAGTGTACAGGAAGCATCTTCAAACT   GCAGCGATGGCGAAGAGGATCGCCGATAAAGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGAGGAGGCCGGAACCTTTTCCATCGCCTCTGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCAAACGCAGGAACAC GGGCGGCAAGAC TGACACCAGCACCACCTTCAAAGGGTTCAAGGGATTCTC TTTGACCCCCAGCTCGGTCACAGCAGCCTTCTCCGGCATCGGGACCAGCGCGGCGTTCACAGGTGTGACCAACGGGAAGCTGCC GTCG  TTGGGAGGAGTCTCTGCTCACGCCGCAGGGCTGATGTTTAGCAGCGCCTCCTCCAGCGATGTCAAATCCAAGCAGACCAACGGCGCCACGCCTCCAAGCTCCGCCTCCTGCAGCGAGTACAACAAACAGCTGACGGCTCTGAACTGCTCCGTGCGGGACTGGATCACCAAGCACGTCAACGAC]
[+] EMBL BU807619             [             ATGGCGCTGTGAGCGGGGCTCGTTCAAAACACGGCCGTCCTCACCTGTTCCGGCGGTTAAAGCTGACGCGTTCGGCGCTTGGAGAGTTCGGAGATCTGCCCAGAAGCAACGGTTGGACTTTAGTGTACAGGAAGCATCTTCAAACT   GCAGCGATGGCGAAGAGGATCGCCGATAAAGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGAGGAGGCCGGAACCTTTTCCATCGCCTCCTACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCAAACGCAGGAACAC GGGCGGCGAGAC TGACACCAGCACCACCTTCAAAGGGTTCAAGGGATTCTC TTTGACCCCCAGCTCGGTCACAGCAGCCTTCTCCGGCATCGGGACCAGCGCGGCGTTCACAGGTGTGACCAACGGGAAGCTGCC GTCG  TTGGGAGGAGTCTCTGCTCACGCCACAGGGCTGATGTTTAGCAGCGCCTCCTCCAGCGATGTCAAATCCAAGCAGACCAACGGCGCCACGCCTCCAAGCTCCGCCTCCTGCAGCGAGTACAACAAACAGCTGACGGCTCTGAACTGCTCC                                 ]
[+] EMBL CA590280             [             ATGGCGCTGTGAGCGGGGCTCGTTCAAAACACGGCCGTCCTCACCTGTTCCGGCGGTTAAAGCTGACGCGTTCGGCGCTTGGAGAGTTCGGAGATCTGCCCAGAAGCAACGGTTGGACTTTAGTGTACAGGAAGCATCTTCAAACTGCAGCAGCGATGGCGAAGAGGATCGCCGATAAAGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGAGGAGGCCGGAACCTTTTCCATCGCCACCGTCGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCAAACGCAGGAACCC CGGCGGGGAGAC TGACACCCGCACCACCTTC                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BU807987             [                      TGAGCGGGGCTCGTTCAAAACACGGCCGTCCTCACCTGTTCCGGCGGTTAAAGCTGACGCGTTCGGCGCTTGGAGAGTTCGGAGATCTGCCCAGAAGCAACGGTTGGACTTTAGTGTACAGGAAGCATCTTCAAACT   GCAGCGATGGCGAAGAGGATCGCCGATAAAGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGAGGAGGCCGGAACCTTTTCCATCGCCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCAAACGCAGGAACAC GGGCGGCGAGAC TGACACCAGCACCACCTTCAAAGGGTTCAAGGGATTCTC TTTGACCCCCAGCTCGGTCACAGCAGCCTTCTCCGGCATCGGGACCAGCGCGGCGTTCACAGGTGTGACCAACGGGAAGCTGCC GTCG  TTGGGAGGAGTCTCTGCTCACGCCACAGGGCTGATGTTTAGCAGCGCCTCCTCCAGCGATGTCAAATCCAAGCAGACCAACGGCGCCACGCCTCCAAGCTCCGCCT                                                                             ]
[+] EMBL CA590712             [                                                  TCCTCACCTGTTCCGGCGGTTAAAGCTGACGCGTTCGGCGCTTGGAGAGTTCGGAGATCTGCCCAGAAGCAACGGTTGGACTTTAGTGTACAGGAAGCATCTTCAAACT   GCAGCGATGGCGAAGAGGATCGCCGATAAAGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGAGGAGGCCGGAACCTTTTCCATCGCCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCAAACGCAGGAACAC GGGCGGCGAGAC TGACACCAGCACCACCCTCAAAGGGTTCAAGGGATTCTC TTTGACCCCCAGCTCGGTCACAGCAGCCTTCTCCGGCATCGGGACCAGCGCGGCGTTCACAGGTGTGACCAACGGGAAGCTGCC GTCGNNTTGGGAGGAGTCTCTGCTCACGCCACAGGGCTGATGTTTAGCAGCGCCTCCTCCAGCGATG                                                                                                                          ]
[+] EMBL FR0061463            [                                                      CACCTGTTCCGTCGGTTAAAGCTGACGCGTTCGGCGCTTGGAGAGTTCGGTGATCTGCCCAGAACCAACGGTTGGACTTTAGTGTACAGGAAGCATCTTCAAACT   GCAGCGATGGCGAAGAGGATCGCCGATAAAGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGAGGAGGCCGGAACCTTTTCCATCGCCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCATACGCAGGAACAC GGGCGGCGAGAC TGACACCATCACCACCTTCAAAGGGGTCAAGGGATTCTC TTTGACCCCCAG                                                                                                                                                                                                                                                                      ]
[+] EMBL FR0060607            [                                                                        AAGCTGACGCGTTCGGCGCTTGGAGAGTTCGGAGATCTGCCCAGAAGCAACGGGTGGACTTTAGTGTACAGGAAGCATCTTCAAACTGCAGCAGCGATGGCGAAGAGGATCGCCGATAAAGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGAGGAGGCCGGAACCTTTTCCATCGCCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCAAACGCAGGAACACGGGGCGGGGAGAC TGACACCAGCACCACCTTGAAAGGGTTCAAGGGg                                                                                                                                                                                                                                                                                        ]
[+] EMBL FR0060985            [                                                                          GCTGAGGCGTTCTTCGCTTGAAGACTTCCCATATCTGCCCAGAAGCAACGGGTGGACTTTAGCGTACAGGAAGCATCTTCAAACT   GCAGCGATGGCGAAGAGGATCGCCGATAAAGAGCTGACGGACCGGAACTGGGAACAGGAGGAGGAGGGAGAGGAGGGCGGAACCTTTTCCATCGTCACCGACGACGAGCTGAAGAGCCGAGCCATTAAGAGGGGCGTACGCAGGAACAC GGGCGGCGAGACTTGACACCAGCACCATCTTTAAAGGGTTCAA                                                                                                                                                                                                                                                                                            ]
[+] EMBL FR0061764            [                                                                                cgtTCCGGCGCTTGGAGAGTTCGGAGATCTGCCCAGAAGCAACGGTTGGACTTTAGTGTACAGGAAGCATCTTCAAACT   GCAGCGATGGCGAAGAGGATCGCCGATAAAGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGAGGAGGCCGGAACCTTTTCCATCGCCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCAAACGCAGGAACAC GGGCGGCGAGAC TGACACCAGCACCACCTTCAAAGGGTTCAAGGGATTCTCTTTTGACCCCC                                                                                                                                                                                                                                                                        ]
[+] EMBL FR0060794            [                                                                                               AGAGTTCGGAGATCTGCCCAGAAGCAACGGTTGGACTTTAGTGTACAGGAAGCATCTTCAAACTGCAGCAGCGATGGCGAAGAGGATCGCCGATAAAGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGAGGAGGCCGGAACCTTTTCCATCGCCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCAAACGCAGGAACAC GGGCGGCGAGAC TGACACCAGCACCACCTTTAAAGGGTTCAAGGG                                                                                                                                                                                                                                                                                         ]


>consensus_2754#0 TCCGCTATGCGAAATGGCGCTGTGAGCGGGGCTCGTTCAAAACACGGCCGTCCTCACCTG TTCCGGCGGTTAAAGCTGACGCGTTCGGCGCTTGGAGAGTTCGGAGATCTGCCCAGAAGC AACGGTTGGACTTTAGTGTACAGGAAGCATCTTCAAACTGCAGCGATGGCGAAGAGGATC GCCGATAAAGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGAGGAGGCCGGA ACCTTTTCCATCGCCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCAAACGC AGGAACACGGGCGGCGAGACTGACACCAGCACCACCTTCAAAGGGTTCAAGGGATTCTCT TTGACCCCCAGCTCGGTCACAGCAGCCTTCTCCGGCATCGGGACCAGCGCGGCGTTCACA GGTGTGACCAACGGGAAGCTGCCGTCGTTGGGAGGAGTCTCTGCTCACGCCACAGGGCTG ATGTTTAGCAGCGCCTCCTCCAGCGATGTCAAATCCAAGCAGACCAACGGCGCCACGCCT CCAAGCTCCGCCTCCTGCAGCGAGTACAACAAACAGCTGACGGCTCTGAACTGCTCCGTG CGGGACTGGATCACCAAGCACGTCAACGAC



consensusID : consensus_2754#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 622
fasta sequence
                              [CTCTTCGGCGTTAGCTTCGAGTGTGCCCTGGACGTGTTAGCCGTTAGCCATTAGCTGATGTCCGGGCCCGGTTAGCATCAGAACTGCGAACGAGCACCGGCAAACAGGTCCAGCTCAAACGGTACCGTGGAGGGGTAAAAACCACCCGAGCGCGGCCAGCTAAGCAGGAGTCGCGCACGTTTCCAACGTTAATTTCATTCAAGACGCTGAAGTTCCGGTGCTAATCAGCGATGGCGAAGAGGATCGCCGATAAAGAGCTGACGGGCCGGAACTGGGATCAGGAGGAGGAGGGAGAGGAGGCCGGAACCTTTTCCATCGCCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCAAACGCAGGAACACGGGCGGCGAGACTGACACCAGCACCACCTTCAAAGGGTTCAAGGGATTCTCTTTGACCCCCAGCTCGGTCACAGCAGCCTTCTCCGGCATCGGGACCAGCGCGGCGTTCACAGGTGTGACCAACGGGAAGCTGCCGTCGTTTGGGAGGAGTCTGTGCTCCCCCACAGGCCTGATGGTCTACAAACGCTCCCCCAGCCCTGGCAACTCCAGGACACCAAAGGTGGCACCCTCACAGCCCCCTTCAAGGAG]

[+] EMBL CA590293             [CTCTTCGGCGTTAGCTTCGAGTGTGCCCTGGACGTGTTAGCCGTTAGCCATTAGCTGATGTCCGGGCCCGGTTAGCATCAGAACTGCGAACGAGCACCGGCAAACAGGTCCAGCTCAAACGGTACCGTGGAGGGGTAAAAACCACCCGAGCGCGGCCAGCTAAGCAGGAGTCGCGCACGTTTCCAACGTTAATTTCATTCAAGACGCTGAAGTTCCGGTGCTAATCAGCGATGGCGAAGAGGATCGCCGATAAAGAGCTGACGGGCCGGAACTGGGATCAGGAGGAGGAGGGAGAGGAGGCCGGAACCTTTTCCATCGCCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCAAACGCAGGAACACGGGCGGCGAGACTGACACCAGCACCACCTTCAAAGGGTTCAAGGGATTCTCTTTGACCCCCAGCTCGGTCACAGCAGCCTTCTCCGGCATCGGGACCAGCGCGGCGTTCACAGGTGTGACCAACGGGAAGCTGCCGTCGTTTGGGAGGAGTCTGTGCTCCCCCACAGGCCTGATGGTCTACAAACGCTCCCCCAGCCCTGGCAACTCCAGGACACCAAAGGTGGCACCCTCACAGCCCCCTTCAAGGAG]


>consensus_2754#1 CTCTTCGGCGTTAGCTTCGAGTGTGCCCTGGACGTGTTAGCCGTTAGCCATTAGCTGATG TCCGGGCCCGGTTAGCATCAGAACTGCGAACGAGCACCGGCAAACAGGTCCAGCTCAAAC GGTACCGTGGAGGGGTAAAAACCACCCGAGCGCGGCCAGCTAAGCAGGAGTCGCGCACGT TTCCAACGTTAATTTCATTCAAGACGCTGAAGTTCCGGTGCTAATCAGCGATGGCGAAGA GGATCGCCGATAAAGAGCTGACGGGCCGGAACTGGGATCAGGAGGAGGAGGGAGAGGAGG CCGGAACCTTTTCCATCGCCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCA AACGCAGGAACACGGGCGGCGAGACTGACACCAGCACCACCTTCAAAGGGTTCAAGGGAT TCTCTTTGACCCCCAGCTCGGTCACAGCAGCCTTCTCCGGCATCGGGACCAGCGCGGCGT TCACAGGTGTGACCAACGGGAAGCTGCCGTCGTTTGGGAGGAGTCTGTGCTCCCCCACAG GCCTGATGGTCTACAAACGCTCCCCCAGCCCTGGCAACTCCAGGACACCAAAGGTGGCAC CCTCACAGCCCCCTTCAAGGAG



consensusID : consensus_2754#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 576
fasta sequence
                              [GCGAAATGGCGCTGTGAGCGGGGCTCGTTCAAAACACGGCCGTCCTCACCTGTTCCGGCGGTTAAAGCTGACGCGTTCGGCGCTTGGAGAGTTCGGAGATCTGCCCAGAAGCAACGGTTGGACTTTAGTGTACAGGAAGCATCTTCAAACTGCAGCGATGGCGAAGAGGATCGCCGATAAAGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGAGGAGGCCGGAACCTTTTCCTTCTTCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCAAACGCAGGAACACGGGCGGCGAGACTGACACCAGCACCACCTTCAAAGGGTTCAAGGGATTCTCTTTGACCCCCAGCTCGGTCACAGCAGCCTTCTCCGGCATCGGGACCAGCGCGGCGTTCACAGGTGTGACCAACGGGAAGCTGCCGTCGTTGGGAGGAGTCTCTGCTCACGCCGCAGGTGAGGGGAGGCTCACAGGTGAGGGGAGGCTCACAGGTGAGGGGAGGCTCACAGGTGAGGGGAGGCTCACAGGTGACCTGCTGCCCATCANGACTCTGGTGTGGCTTGT]

[+] EMBL BU807676             [GCGAAATGGCGCTGTGAGCGGGGCTCGTTCAAAACACGGCCGTCCTCACCTGTTCCGGCGGTTAAAGCTGACGCGTTCGGCGCTTGGAGAGTTCGGAGATCTGCCCAGAAGCAACGGTTGGACTTTAGTGTACAGGAAGCATCTTCAAACTGCAGCGATGGCGAAGAGGATCGCCGATAAAGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGAGGAGGCCGGAACCTTTTCCTTCTTCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCAAACGCAGGAACACGGGCGGCGAGACTGACACCAGCACCACCTTCAAAGGGTTCAAGGGATTCTCTTTGACCCCCAGCTCGGTCACAGCAGCCTTCTCCGGCATCGGGACCAGCGCGGCGTTCACAGGTGTGACCAACGGGAAGCTGCCGTCGTTGGGAGGAGTCTCTGCTCACGCCGCAGGTGAGGGGAGGCTCACAGGTGAGGGGAGGCTCACAGGTGAGGGGAGGCTCACAGGTGAGGGGAGGCTCACAGGTGACCTGCTGCCCATCANGACTCTGGTGTGGCTTGT]


>consensus_2754#2 GCGAAATGGCGCTGTGAGCGGGGCTCGTTCAAAACACGGCCGTCCTCACCTGTTCCGGCG GTTAAAGCTGACGCGTTCGGCGCTTGGAGAGTTCGGAGATCTGCCCAGAAGCAACGGTTG GACTTTAGTGTACAGGAAGCATCTTCAAACTGCAGCGATGGCGAAGAGGATCGCCGATAA AGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGAGGAGGCCGGAACCTTTTC CTTCTTCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCAAACGCAGGAACAC GGGCGGCGAGACTGACACCAGCACCACCTTCAAAGGGTTCAAGGGATTCTCTTTGACCCC CAGCTCGGTCACAGCAGCCTTCTCCGGCATCGGGACCAGCGCGGCGTTCACAGGTGTGAC CAACGGGAAGCTGCCGTCGTTGGGAGGAGTCTCTGCTCACGCCGCAGGTGAGGGGAGGCT CACAGGTGAGGGGAGGCTCACAGGTGAGGGGAGGCTCACAGGTGAGGGGAGGCTCACAGG TGACCTGCTGCCCATCANGACTCTGGTGTGGCTTGT



consensusID : consensus_2754#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 339
fasta sequence
                              [TTAGCTGGGCAGAGTCGGTTCCCACCGTGCTGGTTCTGGTTCTGGTTCTGCAGCGATGGCGAGGAGGATCGCCGATAAAGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGAGGAGGCCGGAACCTTTTCCATCGCCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCAAACGCAGGAACACGGGCGGCGAGACTGACACCAGCACCACCTTCAAAGGGTTCAAGGGATTCTCTTTGACCCCCAGCTCGGTCACAGCAGCCTTCTCCGGCATCGGGACCAGCGCGGCGTTCACAGGTGTGACCAGCGGGAAGCTGCCGTCGTT]

[+] EMBL CA333340             [TTAGCTGGGCAGAGTCGGTTCCCACCGTGCTGGTTCTGGTTCTGGTTCTGCAGCGATGGCGAGGAGGATCGCCGATAAAGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGAGGAGGCCGGAACCTTTTCCATCGCCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCAAACGCAGGAACACGGGCGGCGAGACTGACACCAGCACCACCTTCAAAGGGTTCAAGGGATTCTCTTTGACCCCCAGCTCGGTCACAGCAGCCTTCTCCGGCATCGGGACCAGCGCGGCGTTCACAGGTGTGACCAACGGGAAGCTGCCGTCGTT]
[+] EMBL FR0060838            [                                                                                                          GAGGAGGAGAGAGAGGAGGCCGGAACCTTTTCCATCGCCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGCCAAACGCAGGAACACGGGCGGCGAGACTGACACCAGCACCACCTTCAAAGGGTTCAAGGGATTCTCTTTGACCCCCAGCTCGGTCACAGCAGCCTTCTCCGGCATCGCGACCAGCGCGGCGTTCACAGTTTTTACCAGCGCCAAG           ]


>consensus_2754#3 TTAGCTGGGCAGAGTCGGTTCCCACCGTGCTGGTTCTGGTTCTGGTTCTGCAGCGATGGC GAGGAGGATCGCCGATAAAGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGA GGAGGCCGGAACCTTTTCCATCGCCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAA GGCCAAACGCAGGAACACGGGCGGCGAGACTGACACCAGCACCACCTTCAAAGGGTTCAA GGGATTCTCTTTGACCCCCAGCTCGGTCACAGCAGCCTTCTCCGGCATCGGGACCAGCGC GGCGTTCACAGGTGTGACCAGCGGGAAGCTGCCGTCGTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2754#1      CTCTTCGGCGTTAGCTTCGAGTGTGCCCTGGACGTGTTAGCCGTTAGCCATTAGCTGATG 60
consensus_2754#3      ------------------------------------------------------------
consensus_2754#0      ------------------------------------TCCGCTATGCGAAATGGCGCTGTG 24
consensus_2754#2      --------------------------------------------GCGAAATGGCGCTGTG 16
                                                                                  

consensus_2754#1      TCCGGGCCCGGTTAGCATCAGAACTG--CGAACGAGCACCGGCAAACAGGTCCAGCTCAA 118
consensus_2754#3      ------------------------------------------------------------
consensus_2754#0      AGCGGGGCTCGTTCAAAACACGGCCGTCCTCACCTGTTCCGGCGGTTAAAGCTGACGCGT 84
consensus_2754#2      AGCGGGGCTCGTTCAAAACACGGCCGTCCTCACCTGTTCCGGCGGTTAAAGCTGACGCGT 76
                                                                                  

consensus_2754#1      ACGGTACCGTGGAGGGGTAAAAACCACCCGAGCGCGGCCAGCTAAGCAGGAGTCGCGCAC 178
consensus_2754#3      -------------------------------------TTAGCTGGGCAG-AGTCG----- 17
consensus_2754#0      TCGGCGCT-TGGAGAGTTCGGAG--------ATCTGCCCAG--AAGCAACGGTTG----- 128
consensus_2754#2      TCGGCGCT-TGGAGAGTTCGGAG--------ATCTGCCCAG--AAGCAACGGTTG----- 120
                                                             **    ***   ** *     

consensus_2754#1      GTTTCCAACGTTAATTTCATTCAAGACGCTGAAGTTCCGGTGCTAATCAGCGATGGCGAA 238
consensus_2754#3      GTTCCCACCGTG---CTGGTTCTGG---------TTCTGGTTCTG--CAGCGATGGCGAG 63
consensus_2754#0      GACTTTAGTGTA---------CAGGAAGC----ATCTTCAAACTG--CAGCGATGGCGAA 173
consensus_2754#2      GACTTTAGTGTA---------CAGGAAGC----ATCTTCAAACTG--CAGCGATGGCGAA 165
                      *     *  **          *  *         *       **   ************ 

consensus_2754#1      GAGGATCGCCGATAAAGAGCTGACGGGCCGGAACTGGGATCAGGAGGAGGAGGGAGAGGA 298
consensus_2754#3      GAGGATCGCCGATAAAGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGAGGA 123
consensus_2754#0      GAGGATCGCCGATAAAGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGAGGA 233
consensus_2754#2      GAGGATCGCCGATAAAGAGCTGACGGACCGGAACTGGGATCAGGAGGAGGAGGGAGAGGA 225
                      ************************** *********************************

consensus_2754#1      GGCCGGAACCTTTTCCATCGCCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGC 358
consensus_2754#3      GGCCGGAACCTTTTCCATCGCCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGC 183
consensus_2754#0      GGCCGGAACCTTTTCCATCGCCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGC 293
consensus_2754#2      GGCCGGAACCTTTTCCTTCTTCACCGACGACGTGCTGAAGAGCCGAGCCATCAAGAAGGC 285
                      **************** **  ***************************************

consensus_2754#1      CAAACGCAGGAACACGGGCGGCGAGACTGACACCAGCACCACCTTCAAAGGGTTCAAGGG 418
consensus_2754#3      CAAACGCAGGAACACGGGCGGCGAGACTGACACCAGCACCACCTTCAAAGGGTTCAAGGG 243
consensus_2754#0      CAAACGCAGGAACACGGGCGGCGAGACTGACACCAGCACCACCTTCAAAGGGTTCAAGGG 353
consensus_2754#2      CAAACGCAGGAACACGGGCGGCGAGACTGACACCAGCACCACCTTCAAAGGGTTCAAGGG 345
                      ************************************************************

consensus_2754#1      ATTCTCTTTGACCCCCAGCTCGGTCACAGCAGCCTTCTCCGGCATCGGGACCAGCGCGGC 478
consensus_2754#3      ATTCTCTTTGACCCCCAGCTCGGTCACAGCAGCCTTCTCCGGCATCGGGACCAGCGCGGC 303
consensus_2754#0      ATTCTCTTTGACCCCCAGCTCGGTCACAGCAGCCTTCTCCGGCATCGGGACCAGCGCGGC 413
consensus_2754#2      ATTCTCTTTGACCCCCAGCTCGGTCACAGCAGCCTTCTCCGGCATCGGGACCAGCGCGGC 405
                      ************************************************************

consensus_2754#1      GTTCACAGGTGTGACCAACGGGAAGCTGCCGTCGTTTGGGAGGAGTCTGTGCTCCC-CCA 537
consensus_2754#3      GTTCACAGGTGTGACCAGCGGGAAGCTGCCGTCGTT------------------------ 339
consensus_2754#0      GTTCACAGGTGTGACCAACGGGAAGCTGCCGTCGTT-GGGAGGAGTCTCTGCTCACGCCA 472
consensus_2754#2      GTTCACAGGTGTGACCAACGGGAAGCTGCCGTCGTT-GGGAGGAGTCTCTGCTCACGCCG 464
                      ***************** ******************                        

consensus_2754#1      CAGGCCTGATGGTCTACAAACGCTCCCCCAGCCCTGGCAACTCCA-GGACACCAAAGGTG 596
consensus_2754#3      ------------------------------------------------------------
consensus_2754#0      CAGGGCTGATGTTTAGCAGCGCCTCCTCCAGCGATGTCAAATCCAAGCAGACCAACGGCG 532
consensus_2754#2      CAGG--------TGAGGGGAGGCTCA-CAGGTGAGGGGAGGCTCA--CAGGTGAGGGGAG 513
                                                                                  

consensus_2754#1      GCACCCTCACA------GCCCCCTTCAAGGAG---------------------------- 622
consensus_2754#3      ------------------------------------------------------------
consensus_2754#0      CCACGCCTCCAAGCTCCGCCTCCTGCAGCGAGTACAACAAACAGCTGACGGCTCTGAACT 592
consensus_2754#2      GCTCACAGGTGAGGGGAGGCTC--ACAGGTGACCTGCTGCCCATC--ANGACTCTGGTGT 569
                                                                                  

consensus_2754#1      --------------------------------------
consensus_2754#3      --------------------------------------
consensus_2754#0      GCTCCGTGCGGGACTGGATCACCAAGCACGTCAACGAC 630
consensus_2754#2      GGCTTGT------------------------------- 576
                                                            




Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)