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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2778#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 821 fasta sequence
[CTGTATATACATCGATGACCCAAAACTATGTCAAATTGTGCTACCTAGACTTCTACGTCTACAAATTAAAACCAACATCACGATATTATGCCTACTGTTTAGCGGTGAACAAAACCCAACCTGGAGTTTCTCCAACCACCAATACACCACCACCACCCTTCCATACAACAACACCACCACCGATTCATACAACAACATCACCACACATTCATACAACAACATCACCACACATTCATACAACAACATCACCACACATTCGTACAACAACATCACGACCCATTCATACAACAACATCACGACCCTTTCATACAACAACATCACCACACATTCATACAACAACACCGCCTCCACCACACATTCATACAACAACACCACCACCACCACACATTCATACAACAACATCACCACCACCACCGATTCATACAACAACATCACCACACATTCATACAACAACATCACCACCACCACACATTCATACAACAACATCACCACACATTCATACAACAACATCACCACACATTCATACAACAACAGCACCACCACTGGAGGGGCAGCTCCGTCTCGTCAATGGGAATGGCTCCTGCGTTGGAAGAGTCGAGGTCTTCCTCCGAGGACAGTGGGGGACGGTCTGTGACGATGCCTGGGATGTGAATGATGCTCATGTGGTGTGTAGACAGCTCGGCTGTGGGAGGGCCCTGTCCGCACCTATCCGTGCCTTTTATGGACAGGGAAGAGGTCCCATCTGGTTGGATGATGTTCAGTGTTTTGGCAATGAACCGGCGCTCACAGAATGCAGACATTCTGGGGTTGGAAATCACAAC]
[+] EMBL CA591662 [CTGTATATACATCGATGACCCAAAACTATGTCAAATTGTGCTACCTAGACTTCTACGTCTACAAATTAAAACCAACATCACGATATTATGCCTACTGTTTAGCGGTGAACAAAACCCAACCTGGAGTTTCTCCAACCACCAATACACCACCACCACCCTTCCATACAACAACACCACCACCGATTCATACAACAACATCACCACACATTCATACAACAACATCACCACACATTCATACAACAACATCACCACACATTCGTACAACAACATCACGACCCATTCATACAACAACATCACGACCCTTTCATACAACAACATCACCACACATTCATACAACAACACCGCCTCCACCACACATTCATACAACAACACCACCACCACCACACATTCATACAACAACATCACCACCACCACCGATTCATACAACAACATCACCACACATTCATACAACAACATCACCACCACCACACATTCATACAACAACATCACCACACATTCATACAACAACATCACCACACATTCATACAACAACAGCACCACCACTGGAGGGGCAGCTCCGTCTCGTCAATGGGAATGGCTCCTGCGTTGGAAGAGTCGAGGTCTTCCTCCGAGGACAGTGGGGGACGGTCTGTGACGATGCCTGGGATGTGAATGATGCTCATGTGGTGTGTAGACAGCTCGGCTGTGGGAGGGCCCTGTCCGCACCTATCCGTGCCTTTTATGGACAGGGAAGAGGTCCCATCTGGTTGGATGATGTTCAGTGTTTTGGCAATGAACCGGCGCTCACAGAATGCAGACATTCTGGGGTTGGAAATCACAAC]
consensusID : consensus_2778#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 811 fasta sequence
[TCCAACAGTCTCTCTCAGCGCACTTGTCTTGTGGATGTGGTCTTCAATGGGGGCTCCTGAGGGACTGGTGTGGCTCCTACTTTTGCTCATTTATACTGGGAGCACTTCAGGGACACTGGTCACCAGCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGGGGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCACCTGCTACGATCAGAAACTCTGCAGTGACTCTGATTGCTGTGCTCAAGGTTATCAGTGGTCAGCAGAAAGAGGCTGTGAGGACACCGACGAGTGTTCTCTTCCCGACTCTCCTTGTCAGCCACCCCAGGTTTGCCGAAACACCCTGGGATCCTATGAATGCCTCCAGCCTCCCTCCAGAACCAAATCAGGCCCTTCTGACACCAAGCAAACAAAAAATTCACCTGATAAAAAACAAGCCCCTGTGCAAAGCAAATCGACATCTATTCCTGATGTTATCAAATTAGGACGATCTGCAACAGGAACAGCACCACCAATGATTATAAATACATATTTACCCTTTGATACAACAACAACACCCAGTACTGCAACAGGAGCACCACCCTTTCATACAACAACACCCTTTATGACAACAGCACCACCACTGGAGGGGCAGCTCCGTCTCGTCAATGGGAATGGCTCCTGCGTTGGAAGAGTCGAGGTCTTCCGCCAAAGACAGTGGGGGACGGTCTGTGATAGTTTATGGGATGTGAATGATGCTCATGTGGTGTGTAGACAGCTTGGCTGTGGGAGGGGC]
[+] EMBL CA588315 [TCCCTTAGACTCTCTCAGCGCACTTGTCTTGTGGATGTGGTCTTC TTGGGGGCTCCTGAGGGACTGGTGTGGCTCCTACTTTTGCTCATTTATACTGGGAGCACTTCAGGGACACTGGTCACCAGCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGGGGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCACCTGCTACGATCAGAAACTCTGCAGTGACTCTGATTGCTGTGCTCAAGGTTATCAGTGGTCAGCAGAAAGAGGCTGTGAGGACACCGACGAGTGTTCTCTTCCCGACTCTCCTTGTCAGCCACCCCAGGTTTGCCGAAACACCCTGGGATCCTATGAATGCCTCCAGCCTCCCTCCAGAACCAAATCAGGCCCTTCTGACACCAAGCAAACAAAAAATTCACCTGATAAAAAACAAGCCCCTGTGCAAAGCAAATCGACATCTATTCCTGATGTTATCAAATTAGGACGATCTGCAACAGGAACAGCACCACCAATGATTATAAATACATATTTACCCTTTGATACAACAACAACACCCAGTACTGCAACAGGAGCACCACCCTTTCATACAACAACACCCTTTATGACAACAGCACCACCACTGGAGGGGCAGCTCCGTCTCGTCAATGGGAATGGCTCCTGCGTTGGAAGAGTCGAGGTCTTCCGCCAAAGACAGTGGGGGACGGTCTGTGATAGTTTATGGGATGTGAATGATGCTCATGTGGTGTGTAGACAGCTTGGCTGTGGGAGGGGC]
[+] EMBL CA591643 [ CCAAGAGTCTCTCTCAGCGCACTTGTCTTGTGGATGTCTTCTTCAATGGGGGCTCCTGAGGGACTGGTGTGGCTCCTACTTTTGCTCATTTATACTGGGAGCACTTCAGGGACACTGGTCACCAGCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGGGGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCACCTGCTACGATCAGAAACTCTGCAGTGACTCTGATTGCTGTGCTCAAGGTTATCAGTGGTCAGCAGAAAGAGGCTGTGAGGACACCGACGAGTGTTCTCTTCCCGACTCTCCTTGTCAGCCACCCCAGGTTTGCCGAAACACCCTGGGATCCTATGAATGCCTCCAGCCTCCCTCCAGAACCAAATCAGGCCCTTCTGACACCAAGCAAACAAAAAATTCACCTGATAAAAAACAAGCCCCTGTGCAAAGCAAATCGACATCTATTCCTGATGTTATCAAATTAGGACGATCTGCAACAGGAACAGCACCACCAATGATTATAAATACATATTTACCCTTTGATACAACAACAACACCCAGTACTGCAACAGGAGCACCACCCTTTCATACAACAACACCCTTTATGACAACAGCACCACCACTGGAGGGGCAGCTCCGTCTCGTCAATGGGAATGGCTCCTGCGTTGGAAGAGTCGAGGTCTTCCGCCAAAGACAGTGGGGGACGGTCTGTGAT ]
[+] EMBL CA590048 [ CAGTCTCTGTCAGCGCACTTGTCTTGTGGATGTGGTCTTCAATGGGGGCTCCTAAGGGACTGGTGTGGCTCCTACTTTTGCTCATTTATACTGGGAGCACTTCAGGGACACTGGTCACCAGCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGGGGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCACCTGCTACTATCTGAAACTCTGCAGTGACTCTGATTGCTGTGCTCAAGGTTATCAGTGGTCAGCAGAAAGAGGCTGTGAGGACACCGACGAGTGTTCTCTTCCCGACTCTCCTTGTCAGCCACCCCAGGTTTGCCGAAACACCCTGGGATCCTATGAATGCCTCCAGCCTCCCTCCAGAACCAAATCAGGCCCTTCTGACACCAAGCAAACAAAAAATTCACCTGATAAAAAACAAGCCCCTGTGCAAAGCAAATCGACATCTATTCCTGATGTTATCAAATTAGGACGATCTGCAACAGGAACAGCACCACCAATGATTACAAATACATATTTACCCTTTGATACAACAACAACACCCAGTACTGCAACAGGAGCACCACCCTTTCATACAACAGCAGCCTTT ]
[+] EMBL CA589905 [ CAGTCTCTCTCAGCGCACTTGTCTTGTGGATGTGGTCTTCAATGGGGGCTCCTGAGGGACTGGTGTGGCTCCTACTTTTGCTCATTTATACTGGGAGCACTTCAGGGACACTGGTCACCAGCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGGGGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCACCTGCTACGATCAGAAACTCTGCAGTGACTCTGATTGCTGTGCTCAAAGTTATCAGTGGTCAGCAGAAAGAGGCTGTGAGGACACCGACGAGTGTTCTCTTCCCGACTCTCCTTGTCAGCCACCCCAGGTTTGCCGAAACACCCTGGGATCCTATGAATGCCTCCAGCCTCCCTCCAGAACCAAATCAGGCCCTTCTGACACCAAGCAAACAAAAAATTCACCTGATAAAAAACAAGCCCCTGTGCAAAGCAAATCGACATCTATTCCTGATGTTATCAAATTAGGACGATCTGCAACAGGAACAGCACCACCAATGATTATAAATACATATTTACCCTTTGATACAACAACAACACCCAGTACTGCAACAGGAGCACCACCCTTTCATACAACAACACCC ]
[+] EMBL CA590130 [ CAGTCTCTCTCAGCGCACTTGTCTTGTGGATGTGGTCTTCAATGGGGGCTCCTGAGGGACTGGTGTGGCTCCTACTTTTGCTCATTTATACTGGGAGCACTTCAGGGACACTGGTCACCAGCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGGGGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCACCTGCTACGATCAGAAACTCTGCAGTGACTCTGATTGCTGTGCTCAAGGTTATCAGTGGTCAGCAGAAAGAGGCTGTGAGGACACCGACGAGTGTTCTCTTCCCGACTCTCCTTGTCAGCCACCCCAGGTTTGCCGAAACACCCTGGGATCCTATGAATGCCTCCAGCCTCCCTCCAGAACCAAATCAGGCCCTTCTGACACCAAGCAAACAAAAAATTCACCTGATAAAAAACAAGCCCCTGTGCAAAGCAAATCGACATCTATTCCTGATGTTATCAAATTAGGACGATCTGCAACAGGAACAGCACCACCAATGATTA ]
[+] EMBL CA589632 [ TGGTGTGGCTCCTACTTTTGCTCATTTATACTGGGAGCACTTCAGGGACACTGGTCACCAGCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGGGGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCACCTGCTACGATTTTTTTCTCTGCAGTGACTCTGATTGCTGTGCTCAAGGTTATCAGTGGTCAGCAGAAAGAGGCTGTGAGGACACCGACGAGTGTTCTCTTCCCGACTCTCCTTGTCAGCCACCCCAGGTTTGC ]
consensusID : consensus_2778#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 790 fasta sequence
[TCCCACAGTCTCTGTCAGCGTGCTTATCTTGTGGATGTGGTCTTCAATGGGGGCTCCTGAGGGACTGGTGTGGCTCCTACTTTTGCTTATTTATACTGGGAGCACTTCAGGGACACTGGTCACCAGCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGGGGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCACCTGCTACGATCAGAAACTCTGCAGTGACTCTGATTGCTGTGCTCAAGGTTATCAGTGGTCAGCAGAAAGAGGCTGTGAGGACACCGACGAGTGTTCTCTTCCCGACTCTCCTTGTCAGCCACCCCAGGTTTGCCGAAACACCCTGGGATCCTATGAATGCCTCCAGCCTCCTTCCAGAACCAAATCAGGCCCTTCTGACACCAAGCAAACAAAAAATTCACCTGATAAAAAACAAGCCCCTGTGCAAAGCAAATCGACATCTATTCCTGATGTTATCAAATTAGGACGATCTGCAACAGGAACAGCACCACCAATGATTATAAATACATATTTACCCTTTGACACAACAACAACACCCAGTACTGCAATAGCACACTTTCCTACAACAGCAACACACACTGCTACAACATCACCACCCTTTCATACAACAGCAGCCTTTATGACAACAGCACCACCACTGGAGGGGCAGCTCCGTCTCGTCAATGGGAATGGCTCCTGCGTTGGAAGAGTCGAGGTCTTCCTCCGAGGACAGTGGGGGACGGTCTGTGACGAT]
[+] EMBL CA591673 [TCCCACAGTCTCTGTCAGCGTGCTTATCTTGTGGATGTGGTCTTCAATGGGGGCTCCTGAGGGACTGGTGTGGCTCCTACTTTTGCTTATTTATACTGGGAGCACTTCAGGGACACTGGTCACCAGCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGGGGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCACCTGCTACGATCAGAAACTCTGCAGTGACTCTGATTGCTGTGCTCAAGGTTATCAGTGGTCAGCAGAAAGAGGCTGTGAGGACACCGACGAGTGTTCTCTTCCCGACTCTCCTTGTCAGCCACCCCAGGTTTGCCGAAACACCCTGGGATCCTATGAATGCCTCCAGCCTCCTTCCAGAACCAAATCAGGCCCTTCTGACACCAAGCAAACAAAAAATTCACCTGATAAAAAACAAGCCCCTGTGCAAAGCAAATCGACATCTATTCCTGATGTTATCAAATTAGGACGATCTGCAACAGGAACAGCACCACCAATGATTATAAATACATATTTACCCTTTGACACAACAACAACACCCAGTACTGCAATAGCACACTTTCCTACAACAGCAACACACACTGCTACAACATCACCACCCTTTCATACAACAGCAGCCTTTATGACAACAGCACCACCACTGGAGGGGCAGCTCCGTCTCGTCAATGGGAATGGCTCCTGCGTTGGAAGAGTCGAGGTCTTCCTCCGAGGACAGTGGGGGACGGTCTGTGACGAT]
[+] EMBL CA588373 [TCCCATAATCTCTGTCAGCGTGCTTATCTTGTGGATGTGGTCTTCTATGGGGGCTCCTGAGGGACTGGTGTGGCTCCTACTTTTGCTTATTTATACTGGGAGCACTTCAGGGACACTGGTCACCAGCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGGGGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCACCTGCTACGATCAGAAACTCTGCAGTGACTCTGATTGCTGTGCTCAAGGTTATCAGTGGTCAGCAGAAAGAGGCTGTGAGGACACCGACGAGTGTTCTCTTCCCGACTCTCCTTGTCAGCCACCCCAGGTTTGCCGAAACACCCTGGGATCCTATGAATGCCTCCAGCCTCCTTCCAGAACCAAATCAGGCCCTTCTGACACCAAGCAAACAAAAAATTCACCTGATAAAAAACAAGCCCCTGTGCAAAGCAAATCGACATCTATTCCTGATGTTATCAAATTAGGACGATCTGCAACAGGAACAGCACCACCAATGATTATAAATACATATTTACCCTTTGACACAACAACAACACCCAGTACTGCAATAGCACACTTTCCTACAACAGCAACACACACTGCTACAACATCACCACCCTTTCATACAACAGCAGCCTTTATGACAACAGCACCACCACTGGAGGGGCAGCTCCGTCTCGTCAATGGGAATGGCTCCTGCGTTGGAAGAGTCGAGGTCTTCCTCCGAGGACAGTGGGGGACGGTCTGTGACGAT]
[+] EMBL CA589957 [ CAGTCTCTGTCAGCGTGCTTATCTTGTGGATGTGGTCTTCAATGGGGGCTCCTGAGGGACTGGTGTGGCTCCTACTTTTGCTTATTTATACTGGGAGCACTTCAGGGACACTGGTCACCAGCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGGGGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCACCTGCTACGATCAGAAACTCTGCAGTGACTCTGATTGCTGTGCTCAAGGTTATCAGTGGTCAGCAGAAAGAGGCTGTGAGGACACCGACGAGTGTTCTCTTCCCGACTCTCCTTGTCAGCCACCCCAGGTTTGCCGAAACACCCTGGGATCCTATGAATGCCTCCAGCCTCCTTCCAGAACCAAATCAGGCCCTTCTGACACCAAGCAAACAAAAAATTCACCTGATAAAAAACAAGCCCCTGTGCAAAGCAAATCGACATCTATTCCTGATGTTATCAAATTAGGACGATCTGCAACAGGAACAGCACCACCAATGATTATAAATACATATTTACCCTTTGACACAACAACAACACCCAGTACTGCAATAGCACACTTTCCTACAACAGCAACACACACTGCTAC ]
[+] EMBL CA589682 [ CAGTCTCTGTCAGCGTGCTTATCTTGTGGATGTGGTCTTCAATGGGGGCTCCTGAGGGACTGGTGTGGCTCCTACTTTTGCTTATTTATACTGGGAGCACTTCAGGGACACTGGTCACCAGCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGGGGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCACCTGCTACGATCAGAAACTCTGCAGTGACTCTGATTGCTGTGCTCAAGGTTATCAGTGGTCAGCAGAAAGAGGCTGTGAGGACACCGACGAGTGTTCTCTTCCCGACTCTCCTTGTCAGCCACCCCAGGTTTGCCGAAACACCCTGGGATCCTATGAATGCCTCCAGCCTCCTTCCAGAACCAAATCAGGCCCTTCTGACACCAAGCAAACAAAAAATTCACCTGATAAAAAACAAGCCCCTGTGCAAAGCAAATCGACATCTATTCCTGATGTTATCAAATTAGGACGATCTGCAACAGGAACAGCACCACCAATGATTATAAATACATATTTACCCTTTGACACAACAACAACACCCAGTACTGCAATAGCACACTTTCCTACAACAGCAACACACAC ]
[+] EMBL CA589860 [ CAGTCTCTGTCAGCGTGCTTATCTTGTGGATGTGGTCTTCAATGGGGGCTCCTGAGGGACTGGTGTGGCTCCTACTTTTGCTTATTTATACTGGGAGCACTTCAGGGACACTGGTCACCAGCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGGGGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCACCTGCTACGATCAGAAACTCTGCAGTGACTCTGATTGCTGTGCTCAAGGTTATCAGTGGTCAGCAGAAAGAGGCTGTGAGGACACCGACGAGTGTTCTCTTCCCGACTCTCCTTGTCAGCCACCCCAGGTTTGCCGAAACACCCTGGGATCCTATGAATGCCTCCAGCCTCCTTCCAGAACCAAATCAGGCCCTTCTGACACCAAGCAAACAAAAAATTCACCTGATAAAAAACAAGCCCCTGTGCAAAGCAAATCGACATCTATTCCTGATGTTATCAAATTANGACGATCTGCAACAGGAACAGCACCACCAATGATTATAAATACATATTTA ]
[+] EMBL FR0059638 [ ATGTACTGGCGTGGCTCCTACTTTGGCGGAGTTATACTGNNAGCACTTCAANNACACTCGTCACCANCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGGGGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCACCTGCTACGATCAGAAACTCTGCAGAGACTCTGATTGCTGTGCTCAAGGTTATCAGTGGTCAGCAGAAAGAGGCTGTGAGGACACCGACGGAGGGTCTCTTCCCGACTCTCCTTGGCAGGCACCCCAGGTTTGCCGAAACACCCTGGGATCCTATGAATGCCTCCAGg ]
[+] EMBL CA591553 [ TGGTGTGGCTCCTACTTTTGCTTATTTATACTGGGAGCACTTCAGGGACACTGGTCACCAGCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGGGGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCACCTGCTACGATCAGAAACTCTGCAGTGACTCTGATTGCTGTGCTCAAGGTTATCAGTGGTCAGCAGAAAGAGGCTGTGAGGACACCGACGAGTGTTCTCTTCCCGACTCTCCTTGTCAGCCACCCCAGGTTTGCCGAAACACCCTGGGATCCTATGAATGCCTCCAGCCTCCTTCCAGAACCAAATCAGGCCCTTCTGACACCAAGCAAACAAAAAATTCACCTGATAAAAAAC ]
[+] EMBL FR0059713 [ tGCTCCTACTTTTGCTTA GGATACTGGGAGCACTTCAGGGACACTGG CACCAGCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGGGGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCACCTGCTACGATCAGAAACTCTGCAGTGACTCTGATTGCTGTGCTCAAGGTTATCAGTGGTCAGCAGAAAGAGGCTGTGAGGACACCGACGAGNGTTCTCTTCCCGACTCTGCTTGTCAGCCACCCCAGGGTTGCCGAAACACCCTGGGATCCTATGAATGCCTCCAGGCTCCTTCCAGACCCAAATCAGGCCCTTTTGGCACCAAGCAAACAAAAAA ]
consensusID : consensus_2778#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 775 fasta sequence
[CTTTCCCGAAGTCTCTGTCAGCGTGCTTATCTTGTGGATGTGGTCTTCAATGGGGGCTCCTGAGGGACTGGTGTGGCTCCTACTTTTGCTCATTTATACTGGGAGCACTTCAGGGACACTGGTCACCAGCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGGGGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCACCTGCTACGATCAGAAACTCTGCAGTGACTCTGATTGCTGTGCTCAAGGTTATCAGTGGTCAGCAGAAAGAGGCTGTGAGGACACCGACGAGTGTTCTCTTCCCGACTCTCCTTGTCAGCCACCCCAGGTTTGCCGAAACACCCTGGGATCCTATGAATGCCTCCAGCCTCCCTCCAGAACCAAATCAGGCCCTTCTGACAGATCGGTTCAGGTCGACTGTGGACACGGACTTTGTCCTGAAGGCATGGATTGCCTTGAAGGGAGCGATGGTTTCATGAACTGTGTCGACCCCTGTGAGAACTACAGTGTACTAAATGATGACTGGCGGGCAACTAATTACACATCGGATGAGGTTCATAGTGATGATGTCAACTTTAAAGGCTGGTATCGCTTTTTTTTATGGCAAAAGAGTGCTCATATCCCAGAAAGATGTGTGGCTGCAGGAAGATGTGGAACCTTGTATCCCATATGGATGAGAACTCCTCATCCAACGCAGTCAGGAGTAATTCCAATTTCCCCAATGTGCATTCAGAAA]
[+] EMBL CA588247 [CTTTCCCGACGTCTCTGTCAGCGTGCTTATCTTGTGGATGTCTTTTTCAATGGGGGCTCCTGAGGGACTGGTGTGGCTCCTACTTTTGCTCATTTATACTGGGAGCACTTCAGGGACACTGGTCACCAGCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGGGGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCACCTGCTACGATCAGAAACTCTGCAGTGACTCTGATTGCTGTGCTCAAGGTTATCAGTGGTCAGCAGAAAGAGGCTGTGAGGACACCGACGAGTGTTCTCTTCCCGACTCTCCTTGTCAGCCACCCCAGGTTTGCCGAAACACCCTGGGATCCTATGAATGCCTCCAGCCTCCCTCCAGAACCAAATCAGGCCCTTCTGACAGATCGGTTCAGGTCGACTGTGGACACGGACTTTGTCCTGAAGGCATGGATTGCCTTGAAGGGAGCGATGGTTTCATGAACTGTGTCGACCCCTGTGAGAACTACAGTGTACTAAATGATGACTGGCGGGCAACTAATTACACATCGGATGAGGTTCATAGTGATGATGTCAACTTTAAAGGCTGGTATCGCTTTTTTTTATGGCAAAAGAGTGCTCATATCCCAGAAAGATGTGTGGCTGCAGGAAGATGTGGAACCTTGTATCCCATATGGATGAGAACTCCTCATCCAACGCAGTCAGGAGTAATTCCAATTTCCCCAATGTGCATTCAGAAA]
[+] EMBL CA589870 [ cAGTCTCTGTCAGCGTGCTTATCTTGTGGATGTGGTCTTCAATGGGGGCTCCTGAGGGACTGGTGTGGCTCCTACTTTTGCTCATTTATACTGGGAGCACTTCAGGGACACTGGTCACCAGCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGGGGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCACCTGCTACGATCAGAAACTCTGCAGTGACTCTGATTGCTGTGCTCAAGGTTATCAGTGGCCAGCAGAAAGAGGCTGTGAGGACACCGACGAGTGTTCTCTTCCCGACTCTCCTTGTCAGCCACCCCAGGTTTGCCGAAACACCCTGGGATCCTATGAATGCCTCCAGCCTCCCTCCAGAACCAAATCAGGCCCTTCTGACAGATCGGTTCAGGTCGACTGTGGACACGGACTTTGTCCTGAAGGCATGGATTGCCTTGAAGGGAGCGATGGTTTCATGAACTGTGTCGACCCCTGTGAG ]
[+] EMBL CA591674 [ TGGTGTGGCTCCTACTTTTGCTCATTTATACTGGGAGCACTTCAGGGACACTGGTCACCAGCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGGGGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCACCTGCTACGATCAGAAACTCTGCAGTGACTCTGATTGCTGTGCTCAAGGTTATCAGTGGTCAGCAGAAAGAGGCTGTGAGGACACCGACGAGTGTTCTCTTCCCGACTCTCCTTGTCAGCCACCCCAGGTTTGCCGAAACACCCTGGGATCCTATGAATGCCTCCAGCCTCCCTCCAGAACCAAATCAGGCCCTTCTGACAGATCGGTTCAGGTCGACTGTGGACACGGACTTTGTCCTGAAGGCATGGATTGCCTTGAAGGGAGCGATGGTTTCATGAACTGTGTCGACCCCTGTGAGAACTACAGTGTACTAAATGATGACTGGCGGGCAACTAATTACACATCGGATGAGGTTCATAGTGATGATGTCAACTTTAAAGGCTGGTATCGCTTTTTTTTATGGCAAAAGAGTGCTCATATCCCAGAAAGATGTGTGGCTGCAGGAAGATGTGGAACCTTGTATCCCATATGGATGAGAACTCCTCATCCAACGCAG ]
consensusID : consensus_2778#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 157 fasta sequence
[GCTGCGGTCTTCAATGGCGGCTCCTGAGGGACTGGCGTGCCTCCTACTTTCGCGAGACATACTGACAGCACTTCACGCACACTGGACACCAGCTGCGACTCTTGCCACGATGAAGCGACCAGTCTGGAGACAAAAGACAGAGGGGACTCTTTTCTCA]
[+] EMBL FR0059325 [GCTGCGGTCTTCAATGGCGGCTCCTGAGGGACTGGCGTGCCTCCTACTTTCGCGAGACATACTGACAGCACTTCACGCACACTGGACACCAGCTGCGACTCTTGCCACGATGAAGCGACCAGTCTGGAGACAAAAGACAGAGGGGACTCTTTTCTCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2778#3 CTTTCCCGAAGTCTCTGTCAGCGTGCTTATCTTGTGGATGTGGTCTTCAATGGGGGCTCC 60
consensus_2778#4 ------------------------------------GCTGCGGTCTTCAATGGCGGCTCC 24
consensus_2778#1 ---TCCAACAGTCTCTCTCAGCGCACTTGTCTTGTGGATGTGGTCTTCAATGGGGGCTCC 57
consensus_2778#2 ---TCCCACAGTCTCTGTCAGCGTGCTTATCTTGTGGATGTGGTCTTCAATGGGGGCTCC 57
consensus_2778#0 ------------------------------------------------------------
consensus_2778#3 TGAGGGACTGGTGTGGCTCCTACTTTTGCTCATTTATACTGGGAGCACTTCAGGGACACT 120
consensus_2778#4 TGAGGGACTGGCGTGCCTCCTACTTTCGCG-AGACATACTGACAGCACTTCACGCACACT 83
consensus_2778#1 TGAGGGACTGGTGTGGCTCCTACTTTTGCTCATTTATACTGGGAGCACTTCAGGGACACT 117
consensus_2778#2 TGAGGGACTGGTGTGGCTCCTACTTTTGCTTATTTATACTGGGAGCACTTCAGGGACACT 117
consensus_2778#0 --------------------------------------CTGTATATACATCGATGACCCA 22
*** ** ** ** *
consensus_2778#3 GGTCACCAGCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGG 180
consensus_2778#4 GGACACCAGCTGCGACTCTTGCCACGATGAAGCGACCAGTCTGGAGACAAAAGACAGAGG 143
consensus_2778#1 GGTCACCAGCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGG 177
consensus_2778#2 GGTCACCAGCTGCGACTCTTGCCACGATGAAGCGACGTGTCTGGAGACAAAAGACAGAGG 177
consensus_2778#0 AA--ACTATGT-CAAATTGTGCTACC-TAGACTTCTACGTCTACAAATTAAAACCAACAT 78
** * * * * * *** ** * * **** * * *** **
consensus_2778#3 GGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCAC 240
consensus_2778#4 GGACTCTTTTCTCA---------------------------------------------- 157
consensus_2778#1 GGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCAC 237
consensus_2778#2 GGACTCTTTTCTCAAGCTCTCTTGCGCCTGTAAAGACGGCTTCGTAGGAGACGGCCTCAC 237
consensus_2778#0 CACGATATTATGCCTACTGTTTAGCG---GTGAACAAAACCCAACCTGGAGTTTCTCCAA 135
** *
consensus_2778#3 CTGCTACGATCAGAAACTCTGCAGTGACTCTGATTGCTGTGCTCAAGGTTATCAGTGGTC 300
consensus_2778#4 ------------------------------------------------------------
consensus_2778#1 CTGCTACGATCAGAAACTCTGCAGTGACTCTGATTGCTGTGCTCAAGGTTATCAGTGGTC 297
consensus_2778#2 CTGCTACGATCAGAAACTCTGCAGTGACTCTGATTGCTGTGCTCAAGGTTATCAGTGGTC 297
consensus_2778#0 CCACCA-------ATACACCACCACCACCCT--TCCATACAA-CAACACCACCACCGATT 185
consensus_2778#3 AGCAGAAAGAGGCTGTGAGGACACCGACGAGTGTTCTCTTCCCGACTCTCCTTGTCAGCC 360
consensus_2778#4 ------------------------------------------------------------
consensus_2778#1 AGCAGAAAGAGGCTGTGAGGACACCGACGAGTGTTCTCTTCCCGACTCTCCTTGTCAGCC 357
consensus_2778#2 AGCAGAAAGAGGCTGTGAGGACACCGACGAGTGTTCTCTTCCCGACTCTCCTTGTCAGCC 357
consensus_2778#0 CATACAACA-----------ACATCACCACACATTCATACAACAACATCACCACACATTC 234
consensus_2778#3 ACCCCAGGTTTGCCGAAACACCCTGGGATCCTATGAATGCCTCCAGCCTCCCTC-CAGAA 419
consensus_2778#4 ------------------------------------------------------------
consensus_2778#1 ACCCCAGGTTTGCCGAAACACCCTGGGATCCTATGAATGCCTCCAGCCTCCCTC-CAGAA 416
consensus_2778#2 ACCCCAGGTTTGCCGAAACACCCTGGGATCCTATGAATGCCTCCAGCCTCCTTC-CAGAA 416
consensus_2778#0 ATACAA------CAACATCACCACACATTCGTACAACAACATCACGACCCATTCATACAA 288
consensus_2778#3 CCAAATCAGGCCCTTCTGACA--GATCGGTTCAGGTCGACTGTGGACACGGACTTTGTCC 477
consensus_2778#4 ------------------------------------------------------------
consensus_2778#1 CCAAATCAGGCCCTTCTGACACCAAGCAAACAAAAAATTCACCTGATAAAAAACAAGCCC 476
consensus_2778#2 CCAAATCAGGCCCTTCTGACACCAAGCAAACAAAAAATTCACCTGATAAAAAACAAGCCC 476
consensus_2778#0 CAACATCACGACCCTTTCATAC--AACAACATCACCACACA-TTCATACAACAACACCGC 345
consensus_2778#3 TGAAGGCATGGATTGCCTTGAAGGGAGCGATGGTTTCAT-GAACTGTGTCGACCCCTGTG 536
consensus_2778#4 ------------------------------------------------------------
consensus_2778#1 CTGTGCAAAGCA--AATCGACATCTATTCCTGATGTTATCAAATTAGGACGATC--TGCA 532
consensus_2778#2 CTGTGCAAAGCA--AATCGACATCTATTCCTGATGTTATCAAATTAGGACGATC--TGCA 532
consensus_2778#0 CTCCACCACACATTCATACAACAACACCACCACCACCAC-ACATTCATACAA------CA 398
consensus_2778#3 AGAACTACAGTGTACTAAATGATGACTGGCGGGCAACTAATT----ACACATCGGATGAG 592
consensus_2778#4 ------------------------------------------------------------
consensus_2778#1 ACAGGAACAGCACCACCAATGATTATAAATACATATTTACCCTTTGATACAACA-ACAAC 591
consensus_2778#2 ACAGGAACAGCACCACCAATGATTATAAATACATATTTACCCTTTGACACAACA-ACAAC 591
consensus_2778#0 ACATCACCACCACCACCGATTCATACAACAACATCACCACACATTCATACAACA-ACATC 457
consensus_2778#3 GTTCATAGTGATGATGTCAA--CTTTAAAGGCTGGTATCGCTTTTTTTTATGGCA--AAA 648
consensus_2778#4 ------------------------------------------------------------
consensus_2778#1 ACCCAGTACTGCAACAGGAG------------------------------------CACC 615
consensus_2778#2 ACCCAGTACTGCAATAGCACACTTTCCTACAACAGCAACACACACTGCTACAACATCACC 651
consensus_2778#0 ACC-ACCACCACACATTCATA--------------------------CAACAACATCACC 490
consensus_2778#3 GAGTGCTCATATCCCAGAAAGATG---------TGTGGCTGCAGGA--------AGATGT 691
consensus_2778#4 ------------------------------------------------------------
consensus_2778#1 ACCCTTTCATACAACAACACCCTT---------TATGACAACAGCACCACCACTGGAGGG 666
consensus_2778#2 ACCCTTTCATACAACAGCAGCCTT---------TATGACAACAGCACCACCACTGGAGGG 702
consensus_2778#0 ACACATTCATACAACAACATCACCACACATTCATACAACAACAGCACCACCACTGGAGGG 550
consensus_2778#3 GGAACCTTGTATCCCATATGGATGAGAACTCCTCATCCAACGCAGTCAGGAGTAATTCCA 751
consensus_2778#4 ------------------------------------------------------------
consensus_2778#1 GCAGCTCCGTCTCGTCAATGGGAATGGCTCCTGCGTTGGAAGAGTCGAGGTCTTCCGCCA 726
consensus_2778#2 GCAGCTCCGTCTCGTCAATGGGAATGGCTCCTGCGTTGGAAGAGTCGAGGTCTTCCTCCG 762
consensus_2778#0 GCAGCTCCGTCTCGTCAATGGGAATGGCTCCTGCGTTGGAAGAGTCGAGGTCTTCCTCCG 610
consensus_2778#3 ATTTCCCCAATGTGCATTCAGAAA------------------------------------ 775
consensus_2778#4 ------------------------------------------------------------
consensus_2778#1 AAGACAGTGGGGGACGGTCTGTGATAGTTTATGGGATGTGAATGATGCTCATGTGGTGTG 786
consensus_2778#2 AGGACAGTGGGGGACGGTCTGTGACGAT-------------------------------- 790
consensus_2778#0 AGGACAGTGGGGGACGGTCTGTGACGATGCCTGGGATGTGAATGATGCTCATGTGGTGTG 670
consensus_2778#3 ------------------------------------------------------------
consensus_2778#4 ------------------------------------------------------------
consensus_2778#1 TAGACAGCTTGGCTGTGGGAGGGGC----------------------------------- 811
consensus_2778#2 ------------------------------------------------------------
consensus_2778#0 TAGACAGCTCGGCTGTGGGAGGGCCCTGTCCGCACCTATCCGTGCCTTTTATGGACAGGG 730
consensus_2778#3 ------------------------------------------------------------
consensus_2778#4 ------------------------------------------------------------
consensus_2778#1 ------------------------------------------------------------
consensus_2778#2 ------------------------------------------------------------
consensus_2778#0 AAGAGGTCCCATCTGGTTGGATGATGTTCAGTGTTTTGGCAATGAACCGGCGCTCACAGA 790
consensus_2778#3 -------------------------------
consensus_2778#4 -------------------------------
consensus_2778#1 -------------------------------
consensus_2778#2 -------------------------------
consensus_2778#0 ATGCAGACATTCTGGGGTTGGAAATCACAAC 821
|
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |