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Takifugu rubripes
cluster # 2803 cluster # 2803       Sequences # 22       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2803#0 length = 861 sequences # 7  
consensus_2803#1 length = 520 sequences # 2  
consensus_2803#2 length = 368 sequences # 5  
consensus_2803#3 length = 354 sequences # 7  
consensus_2803#4 length = 345 sequences # 1  

consensusID : consensus_2803#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 861
fasta sequence
                              [AACACCTGAGCAGGAGAAAAGGAAGACAAATCGCGTGGCAAGGACAAGCGTCCAGAAGGCGATGACAATGACGATTCAGACAAGGGTGAAGACGTGAGAGGAGACGGTGGCCGAGGCAACCGCGGCGGTGAGCGTGGGGGACATGGGGACCGTGGTCGTGGACGTGGACGTGGCAAAGGCAAAGATGACGACTAGGAAGGAACCAACCTTCTCTCTGAGCCGGTTGCACCCGAGTAGAGGCGCCATTTTAAGACACTGACAAACGCAGCTCGGCCAGCAGGCAGGAC-GCCACCATGTACCCGACCGCTTTGACCCAACTGGCCCGGGGCAACCCGTTCAGCGCGCCCCTCTTTGCCCTCCAGAAAGTCGAGGAGCCGCAACAAAACCTCTCCAGGCAGAACACACGGAAACTGGCCGCAGCCGCCACCTCAGACGAGGTG---AGCTGCGAGTTCGGCTCTTCAAAATACTATGCCCTGTGTGGGTTTGGGGGTAT-CCTGAGCTGCGGCCTCACACACACGGCAGTGGTGCCCCTCGACCTTGTCAA-GTGCCGCCTGCAGGTCAACCCAGACAAATACAAAAGCATCGGCAACGGCTTCTCTGTGACGGTGAAGGAGGACGGTGTTCGAGGCTTGGCCAAGGGATGGGCCCCCACCTTCATCGGCTACTCCATGCAGGGGCTCTGCAAGTTTGGCTTCTACGAAGTGTTCAAGATCTTTTACAGTGACCTGCTGGGAGAGGAGAACACCTACCTCTGGAGGACATCGCTGTACTTGGCTGCGTCAGCCAGCGCCGAGTTCTTTGCAGACATTGCTCTGGCTCCAATGGAGGCCGTCAAGGTTCGGATCCAAACCCAGCCAAGCT]

[+] EMBL BU806904             [AACACCTGAGCAGGAGAAAAGGAAGACAAATCGCGTGGCAAGGACAAGCGTCCAGAAGGCGATGACAATGACGATTCAGACAAGGGTGAAGACGTGAGAGGAGACGGTGGCCGAGGCAACCGCGGCGGTGAGCGTGGGGGACATGGGGACCGTGGTCGTGGACGTGGACGTGGCAAAGGCAAAGATGACGACTAGGAAGGAACCAACCTTCTCTCTGAGCCGGTTGCACCCGAGTAGAGGCGCCATTTTAAGACACTGACAAACGCAGCTCGGCCAGCAGGCAGGAC GCCACCATGTACCCGACCGCTTTGACCCAACTGGCCCGGGGCAACCCGTTCAGCGCGCCCCTCTTTGCCCTCCAGAAAGTCGAGGAGCCGCAACAAAACCTCTCCAGGCAGAACACACGGAAACTGGCCGCAGCCGCCACCTCAGACGAGGTG   AGCTGCGAGTTCGGCTCTTCAA                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL FR0063038            [                                                                                                                                                                                                                                                                          AGCTCGGCCAGCAGGCAGGAC GCCACCATGTACCCGACCGCTTTGACCCAACTGGCCCGGGGCAACCCGTTCAGCGCGCCCCTCTTTGCCCTCCAGAAAGTCGAGGAGCCGCAACAAAACCTCTCCAGGCAGAACACACGGAAACTGGCCGCAGCCGCCACCTCAGACGAGGGGGACAGTTGCGAGTTCGGCTCTCAGAAGTATCTCGTCCTGTGTGGATTTGGTGGGAT TCTGAGTTGTGGCACTACACACACAGCGGTTGTCCCGCTCGATCTGGTCAA ATGCAGAATGCAGGTCAACCCAGACAAATACAAAAGCATCGGCAACGGCTTCTCTGTGACGGTGAAGGAGGACGGTGTTCGAGGCTTGGCCAAGGGATGGGCCCCCACCTTCA                                                                                                                                                                                                            ]
[+] EMBL FR0062862            [                                                                                                                                                                                                                                                                             TCGGCCAGCAGGCAGGACTGCCACCATGTACCCGACCGCTTTGACCCAACTGGCCCGGGGCAACCCGTTCAGCGCGCCCCTCTTTGCCCTCCAGAAAGTCGAGGAGCCGCAACAAAACCTCTCCAGGCAGAACACACGGAAACTGGCCGCAGCCGCCACCTCAGACGAGGTG   GGCTGCGAGTTCGGCTCTTCAAAATACTATGCCCTGTGTGGGTTTGGGGGTATCCCTGAGCTGCGGCCTCACACACACGGCAG                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CA845698             [                                                                                                                                                                                                                                                                                  acctctGAAGGAC GCCACCATGTACCCGACCGCTTTGACCCAACTGGCCCGGGGCAACCCGTTCAGCGCGCCCCTCTTTGCCCTCCAGAAAGTCGAGGAGCCGCAACAAAACCTCTCCAGGCAGAACACACGGAAACTGGCCGCAGCCGCCACCTCAGACGAGGTG   AGCTGCGAGTTCGGCTCTTCAAAATACTATGCCCTGTGTGGGTTTGGGGGTAT CCTGAGCTGCGGCCTCACACACACGGCAGTGGTGCCCCTCGACCTTGTCAA GTGCCGCCTGCAGGTCAACCCAGACAAATTTTTTATCATCGGCAACGGCTTCTCTGTGACGGTGAAGGAGGACGGTGTTCGAGGCTTGGCCAAGGGATGGGCCCCCACCTTCATC                                                                                                                                                                                                          ]
[+] EMBL FR0060930            [                                                                                                                                                                                                                                                                                           GGAC GCGGGCATGTACCCGACCGCTTTGACCCAACTGGCCCGGGGCAACCCGTTCAGCGCGCCCCTCTTTGCCCTCCAGAAAGTCGAGGAGCCGCAACAAAACCTCTCCAGGCAGAACACACGGAAACTGGCCGCAGCCGCCACCTCAGACGAGGTG   AGCTGCGAGTTCGGCTCTTCAAAATACTATGCCCTGTGTGGGTTTGGGGGTAT CCTGAGCTGCGGCCTCACACACACGGCAGGGGTGCCCCTTGACCTTGGCAAGGTGCCGCCTGCAGGTCAACCCAGACAAATACAAAAGCA                                                                                                                                                                                                                                                                                       ]
[+] EMBL CA845708             [                                                                                                                                                                                                                                                                                           GGAC GCCACCATGTACCCGACCGCTTTGACCCAACTGGCCCGGGGCAACCCGTTCAGCGCGCCCCTCTTTGCCCTCCAGAAAGTCGAGGAGCCGCAACAAAACCTCTCCAGGCAGAACACACGGAAACTGGCCGCAGCCGCCACCTCAGACGAGGTG   AGCTGCGAGTTCGGCTCTTCAAAATACTATGCCCTGTGTGGGTTTGGGGGTAT CCTGAGCTGCGGCCTCACACACACGGCAGTGGTGCCCCTCGACCTTGTCAA GTGCCGCCTGCAGGTCAACCCAGACAAATACTTAAGCATCGGCAACGGCTTCTCTGTGACGGTGAAGGAGGACGGTGTTCGAGGCTTGGCCAAGGGATGGGCCCCCACCTTCATCGGCT                                                                                                                                                                                                      ]
[+] EMBL FR0062318            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CCCAGACAAATACAAAAGCATCGGCAACGGCTTCTCTGTGACGGTGAAGGAGGACGGTGTTCGAGGCTTGGCCAAGGGATGGGCCCCCACCTTCATCGGCTACTCCATGCAGGGGCTCTGCAAGTTTGGCTTCTACGAAGTGTTCAAGATCTTTTACAGTGACCTGCTGGGAGAGGAGAACACCTACCTCTGGAGGACATCGCTGTACTTGGCTGCGTCAGCCAGCGCCGAGTTCTTTGCAGACATTGCTCTGGCTCCAATGGAGGCCGTCAAGGTTCGGATCCAAACCCAGCCAAGCT]


>consensus_2803#0 AACACCTGAGCAGGAGAAAAGGAAGACAAATCGCGTGGCAAGGACAAGCGTCCAGAAGGC GATGACAATGACGATTCAGACAAGGGTGAAGACGTGAGAGGAGACGGTGGCCGAGGCAAC CGCGGCGGTGAGCGTGGGGGACATGGGGACCGTGGTCGTGGACGTGGACGTGGCAAAGGC AAAGATGACGACTAGGAAGGAACCAACCTTCTCTCTGAGCCGGTTGCACCCGAGTAGAGG CGCCATTTTAAGACACTGACAAACGCAGCTCGGCCAGCAGGCAGGACGCCACCATGTACC CGACCGCTTTGACCCAACTGGCCCGGGGCAACCCGTTCAGCGCGCCCCTCTTTGCCCTCC AGAAAGTCGAGGAGCCGCAACAAAACCTCTCCAGGCAGAACACACGGAAACTGGCCGCAG CCGCCACCTCAGACGAGGTGAGCTGCGAGTTCGGCTCTTCAAAATACTATGCCCTGTGTG GGTTTGGGGGTATCCTGAGCTGCGGCCTCACACACACGGCAGTGGTGCCCCTCGACCTTG TCAAGTGCCGCCTGCAGGTCAACCCAGACAAATACAAAAGCATCGGCAACGGCTTCTCTG TGACGGTGAAGGAGGACGGTGTTCGAGGCTTGGCCAAGGGATGGGCCCCCACCTTCATCG GCTACTCCATGCAGGGGCTCTGCAAGTTTGGCTTCTACGAAGTGTTCAAGATCTTTTACA GTGACCTGCTGGGAGAGGAGAACACCTACCTCTGGAGGACATCGCTGTACTTGGCTGCGT CAGCCAGCGCCGAGTTCTTTGCAGACATTGCTCTGGCTCCAATGGAGGCCGTCAAGGTTC GGATCCAAACCCAGCCAAGCT



consensusID : consensus_2803#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 520
fasta sequence
                              [GCAGGCAGGACGCCACCATGTACCCGACCGCTTTGACCCAACTGGCCCGGGGCAACCCGTTCAGCGCGCCCCTCTTTGCCCTCCAGAAAGTCGAGGAGCCGCAACAAAACCTCTCCAGGCAGAACACACGGAAACTGGCCGCAGCCGCCACCTCAGACGGTAATCCCGGAGCGGACACCACTGCAGCTATGCTACGTTAGCATTGGCAGCTAGACATTTCAGGTTGCCAGAGGAGGGACATCGTAGGTCAACGTGCACAGGGATTGCTGATCAACCGCATGTACCGTTGTCATTGAGCATAGCTACTTAAGAATTTAGCCCAAGTGCAGGGCTTTCACCAGGCCACAAGCCTGTGGAGGACAAGGAAGGACAAAGTGCTAGCTAACATGGTCGCTGCAGGACACTGACCAAAACAGCTTTGCTGCAACCATCCTGCATAGTTGTAGTTTGGTGTTTGCCACCCTAAAATGCTAAGTCTGCCCTGGAGGTGCACTTCCGTGTGTCCCTTCTATGTGTGGTA]

[+] EMBL CA589195             [GCAGGCAGGACGCCACCATGTACCCGACCGCTTTGACCCAACTGGCCCGGGGCAACCCGTTCAGCGCGCCCCTCTTTGCCCTCCAGAAAGTCGAGGAGCCGCAACAAAACCTCTCCAGGCAGAACACACGGAAACTGGCCGCAGCCGCCACCTCAGACGGTAATCCCGGAGCGGACACCACTGCAGCTATGCTACGTTAGCATTGGCAGCTAGACATTTCAGGTTGCCAGTGGAGGGACATCGTAGGTCAACGTGCACAGGGATTGCTGATCAACCGCATGTACCGTTGTCATTGAGCATAGCTACTTAAGAATTTAGCCCAAGTGCAGGGCTTTCACCAGGCCACAAGCCTGTGGAGGACAAGGAAGGACAAAGTGCTAGCTAACATGGTCGCTGCAGGACACTGACCAAAACAGCTTTGCTGCAACCATCCTGCATAGTTGTAGTTTGGTGTTTGCCACCCTAAAATGCTAAGTCTGCCCTGGAGGTGCACTTCCGTGTGTCCCTTCTATGTGTGGTA]
[+] EMBL FR0059636            [                                         CTGTCCCTTTTCAACCCGTTCAGCACCCCCCTCTTTGCCCTCCAGAAAGTCGAGCAGCCGCAACAAAACCTCTCCACGCAGAACACACGGAAACTGGCCGCAGCCGTCACCTCAGACGGTAATCCCGGAGCGGACACCACTGCAGCTATGCTACGTTAGCATTGGCAGCTAGACATTTCAGGTTGCCAGAGGAGGGACATCGT                                                                                                                                                                                                                                                                                    ]


>consensus_2803#1 GCAGGCAGGACGCCACCATGTACCCGACCGCTTTGACCCAACTGGCCCGGGGCAACCCGT TCAGCGCGCCCCTCTTTGCCCTCCAGAAAGTCGAGGAGCCGCAACAAAACCTCTCCAGGC AGAACACACGGAAACTGGCCGCAGCCGCCACCTCAGACGGTAATCCCGGAGCGGACACCA CTGCAGCTATGCTACGTTAGCATTGGCAGCTAGACATTTCAGGTTGCCAGAGGAGGGACA TCGTAGGTCAACGTGCACAGGGATTGCTGATCAACCGCATGTACCGTTGTCATTGAGCAT AGCTACTTAAGAATTTAGCCCAAGTGCAGGGCTTTCACCAGGCCACAAGCCTGTGGAGGA CAAGGAAGGACAAAGTGCTAGCTAACATGGTCGCTGCAGGACACTGACCAAAACAGCTTT GCTGCAACCATCCTGCATAGTTGTAGTTTGGTGTTTGCCACCCTAAAATGCTAAGTCTGC CCTGGAGGTGCACTTCCGTGTGTCCCTTCTATGTGTGGTA



consensusID : consensus_2803#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 368
fasta sequence
                              [CAACACCTGAGCAGGAAGACAATCACCATGAGTGACAGAGAAAAGGAAGACAAATCGCGTGGCAAGGACAAGCGTCCAGAAGGCGATGACAATGACGATTCAGACAAGGGTGAAGACGTGAGAGGAGACGGTGGCCGAGGCAACCGCGGCGGTGAGCGTGGGGGACATGGGGACCGTGGTCGTGGACGTGGACGTGGCAAAGGCAAAGATGACGACTAGGAAGGAACCAACCTTGAATGGTCATTCTGTACAATGAAGATTGTAGAATGAAATGTTCATCTGTCTAAAATAAAAAATACTTTTAAAAAGAAAAAAAAAAAGGATCAACAGAAAAACCCCGGGGGGGGCCCCGGAAACCAATTTTTGGC]

[+] EMBL CA591195             [CAACACCTGAGCAGGAAGACAATCACCATGAGTGACAGAGAAAAGGAAGACAAATCGCGTGGCAAGGACAAGCGTCCAGAAGGCGATGACAATGACGATTCAGACAAGGGTGAAGACGTGAGAGGAGACGGTGGCCGAGGCAACCGCGGCGGTGAGCGTGGGGGACATGGGGACCGTGGTCGTGGACGTGGACGTGGCAAAGGCAAAGATGACGACTAGGAAGGAACCAACCTTGAATGGTCATTCTGTACAATGAAGATTGTAGAATGAAATGTTCATCTGTCTAAAATAAAAAATACTTTTAAAAA                                                            ]
[+] EMBL CA846839             [                              AGTGACAGAGAAAAGGAAGACAAATCGCGTGGCAAGGACAAGCGTCCACAAGACGATGACAATGACGATTCAGACAAGGGTGAAGACGTGAGAGGAGACGGTGGCCGAGGCAACCGCGGCGGTGAGCGTGGGGGACATGGGGACCGTGGTCGTGGACGTGGACGTGGCAAAGGCAAAGATGACGACTAGGAAGGAACCAACCTTGAATGGTCATTCTGTACAATGAAGATTGTAGAATGAAATGTTCATCTGTCTAAAATAAAAAATACTTTTAA                                                               ]
[+] EMBL FR0055458            [                                          ATGGAAGACAAATCGCGTGGCAAGGACAAGCGTCCAGAAGGCGATGACAATGACGATTCAGACAAGGGTGAAGACGTGAGAGGAGACGGTGGACGAGGCAACCGCGGAGGTGAGCGTGGGGGACATGGAGACCGTGGTCGTGGACGTGGACGTGGCAAAGGCAAAGATGACGACTAGGAAGGAACCACCCTTGAATGGTCATTCTGTACAATGAAGATTGTAGAATGAAATGTTCATCTGTCTAAAATATTCTGTACTTTTAAAATGACAAAATGAACTGTTCAACTGA                                     ]
[+] EMBL FR0056449            [                                                           TGGCAAGGACAAGCGTCCACAAGACGATGACAATGACGATTCAGACAAGGGTGAAGACGTGAGAGGAGACGGTGGCCGAGGCAACCGCGGCGGTGAGCGTGGGGGACATGGGGACCGTGGTCGTGGACGTGGACGTGGCAAAGGCAAAGATGACGACTAGGAAGGAACCAACCTTGAATGGTCATTCTGTACAATGAAGATTGTAGAATGAAATGTTCATCTGTCTAAAATAAAAAATACTTTTAAAATGAAAAAAAAAAA        AAAAAAACCTCGGGGGGGG                     ]
[+] EMBL FR0055768            [                                                                        CGTCCAGAAGGCGATGACAATGACGATTCAGACAAGGGTGAAGACGTGAGAGGAGACGGTGGCCGAAGCAACCGCGGAGGTGAGCGTGGGGGACATGGGGACCGTGGTCGTGGACGTGGACGTGGCAAAGGCAAAGATGACGACTAGGAAGGAACCAACCTTGAATGGTCATTCTGTACAATGAAGATTGTAGAATGAAATGTTCATCTGTCTAAAATAAACAATACTTTTAAAAAAAAAAAAAAAAAGGATCAACAGAAAAACCCCCGGGGGGGCCCCGGAAACCAATTTTTGGC]


>consensus_2803#2 CAACACCTGAGCAGGAAGACAATCACCATGAGTGACAGAGAAAAGGAAGACAAATCGCGT GGCAAGGACAAGCGTCCAGAAGGCGATGACAATGACGATTCAGACAAGGGTGAAGACGTG AGAGGAGACGGTGGCCGAGGCAACCGCGGCGGTGAGCGTGGGGGACATGGGGACCGTGGT CGTGGACGTGGACGTGGCAAAGGCAAAGATGACGACTAGGAAGGAACCAACCTTGAATGG TCATTCTGTACAATGAAGATTGTAGAATGAAATGTTCATCTGTCTAAAATAAAAAATACT TTTAAAAAGAAAAAAAAAAAGGATCAACAGAAAAACCCCGGGGGGGGCCCCGGAAACCAA TTTTTGGC



consensusID : consensus_2803#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 354
fasta sequence
                              [CGAAAGAGGCGCCATTTTAAGACA-----AAACGCAGCTCGGCCAGCAGGCAGGACGCCA--CCATGTACCCGACCGCTTTGACCCAACTGGCCC-GG-G-CAACC-CGTTCAGCGCGCCCCTCTTTGCCCTCCAGAAAGTCGAGGAGCCGCAACAAAACCTCTCCAGGCAGAACACACGGAAACTGGCCGCAGCCGCCACCTCAGACGAGGGGGACAGTTGCGAGTTCGGCTCTCAGAAGTATCTCGTCCTGTGTGGATTTGGTGGGATTCTGAGTTGTGGCACTACACACACAGCGGGTGTCCCGCTCGATCTGGTCAAATGCAGAATGCAGGTCAACCCAGACAAATACAAAAGCATTAGCA]

[+] EMBL FR0062424            [CGAAAGAGGCGCCATTTTAAGACA     CTGACCAACTCGGCCAGCTGGCAGCACGCCA  CCATGTACCCGAGGGCTTTGACCCAACTGGCCC GG G CAACC CGTTCAGCGCGCCCCTCTTTGCCCTCCAGAAAGTCGAGGAGCCGCAACAAAACCTCTCCAGGCAGAACACACGGAAACTGGCCGCAGCCGCCACCTCAGACGAGGGGGACAGTTGCGAGTTCGGCTCTCAGAAGTATCTCGTCCTGTGTGGATTTGGTGGGATTCTGAGTTGTGGCACTACACACACAGCGGTTGTCCCGCTCGATCTGGTCAAATGCAGAATGCAGGTCAACCCAGACAAATACAAAAGCATTAGCA]
[+] EMBL FR0063956            [               TTTAAGACACTGACAAACGCAGCTCGGCCAGCAGGCAGGACGCCA  CCATGTACCCGACCGCTTTGACCCAACTGGCCC GG A CAACC CGTTCAGCGCGCCCCTCTTTGCCCTCCAGAAAGACGAGGAGCCGCAACAAAACCTCTCCAGGCAGAACACACGGAAACTGGGCGCAGCCGCCACCTCAGACGAGGGGGACAGTTGCGAGATCGGCTCTCA                                                                                                                                ]
[+] EMBL FR0062980            [                       c     AAACGCAGCTCGGCCAGCAGGCAGGACGCCA  CCATGTACCCGACCGCTTTGACCCAACTGGCCCGGG G CAACC CGTTCAGCGCGCCCCTCTTTGCCCTCCAGAAAGTCGAGGAGCCGCAACAAAACCTCTCCAGGCAGAACACACGGAAACTGGCCGCAGCCGCCACCTCAGACGAGGGGGACAGTTGCGAGTTCGGCTCTCAGAAGTATCTCGTCCTGTGTGGATTTGGTGGGATTCTGAGTTGTGGCACTACACACACAGCGGTGGTCCCGCTCGATCTTGGCAAATGCAGAATGCAGGGCAACCCAGACAAATACAAA          ]
[+] EMBL FR0062177            [                                                GGCAGGACGCCA  CCATGTACCCGACCGCTATGACCCGGCTGGCCC GGAG CAACC CGTTCAGCGCGCCCCTCTTTGCCCTCCAGAAAGACGAGGAGCCGCAACAAAACCTCTCCAGGCAGAACACACGGAAACTGGCCGCAGCCGCCACCTCAGACGAGGGGGACAGTTGCGAGTTCGGCTCTCAGAAGTATCTCGTCCTGTGTGGATTAGGGGGGATTCTGAGGTGTGGCACTACACACACAGCGTGTGTCCCGCTCGATCTGGTCAAATGCAGAATGCAGGTCAACCCAGACAAATACAAA          ]
[+] EMBL FR0062886            [                                                   AGCACGCCACTCTATGTACCCGACCGCTTTGACCCAACTGGCCC GG GTCAACCGCGTTCAGCGCGCCCCTCTTTGCCCTCCAGAAAGTCGAGGAGCCGCAACAAAACCTCTCCAGGCAGAACACACGGAAACTGGCCGCAGCCGCCACCTCAGACGAGGGGGACAGTTGCGAGTTCGGCTCTCAGAAGTATCTCGTCCTGTGAGGATTTGGTGGGATTCTGAGTTGTGGCACTACACACACAGCGGGTGTCCCGCTCGAT                                                    ]
[+] EMBL FR0062115            [                                                                      CCGGGCGCTTTGACCCAACTGGCCC GGAG CAACC CGTTCAGCGCGCCCCTCTTTGCCCTCCAGAAAGTCGAGGAGCCGCAACAAAACCTCTCCAGGCAGAACACACGGAAACTGGCCGCAGCCGCCACCTCAGACGAGGGGGACAGTTGCGAGTTCGGCTCTCAGAAGTATCTCGTCCTGTGTGGATTTGGCGGGATTCTGAGTTGTGGCACTACACACACAGCGGGTGTCCCGCTCGATCTGGTCAAATGCAGAATGCAGGTTAACCCAGACAAATACAAAAGCAT     ]
[+] EMBL FR0062852            [                                                                        GACCGCTTTGACCCAACTGGCCCGGG G CAACC CGTTCAGCGCGCCCCTCTTTGCCCTCCAGAAAGTCGAGGAGCCGCAACAAAACCTCTCCAGGCAGAACACACGGAAACTGGCCGCAGCCGCCACCTCAGACGAGGGGGACAGTTGCGAGTTCGGCTCTCAGAAGTATCTCGTCCTGTGTGGATTTGGGGGGATTCTGAGGTGTGGCACTACACACACAGCGGTTGTCCCGCTCGATCTGGGCAAATGCAGAAGGCAGGCCA                           ]


>consensus_2803#3 CGAAAGAGGCGCCATTTTAAGACAAAACGCAGCTCGGCCAGCAGGCAGGACGCCACCATG TACCCGACCGCTTTGACCCAACTGGCCCGGGCAACCCGTTCAGCGCGCCCCTCTTTGCCC TCCAGAAAGTCGAGGAGCCGCAACAAAACCTCTCCAGGCAGAACACACGGAAACTGGCCG CAGCCGCCACCTCAGACGAGGGGGACAGTTGCGAGTTCGGCTCTCAGAAGTATCTCGTCC TGTGTGGATTTGGTGGGATTCTGAGTTGTGGCACTACACACACAGCGGGTGTCCCGCTCG ATCTGGTCAAATGCAGAATGCAGGTCAACCCAGACAAATACAAAAGCATTAGCA



consensusID : consensus_2803#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 345
fasta sequence
                              [GACATATCGCGTGGCAAGGACAAGCGTCCAGAAGGCGATGACAATGACGATTCAGACAAGGGTGAAGACGTGAGAGGAGACGGTGGCCGAGGCAACCGCGGCGGTGAGCGTGGGGGACATGGGGACCGTGGTCGTGGACGTGGACGTGGCAAAGGCAAAGATGACGACTAGGAAGGAACCAACCTTGAATGGTCATTCTGTACAATGAAGATTGTAGAATGAAATGTTCATCTGTCTAAAATAAACGATACTTTTAAAATGAAAAAAAAAAATGTACAACAATCAACAAAAGAACAAAACATGAAAAACGCCCCCCGGGGGGGGCCCGGGAACCATTTTTTTGCC]

[+] EMBL FR0055809            [GACATATCGCGTGGCAAGGACAAGCGTCCAGAAGGCGATGACAATGACGATTCAGACAAGGGTGAAGACGTGAGAGGAGACGGTGGCCGAGGCAACCGCGGCGGTGAGCGTGGGGGACATGGGGACCGTGGTCGTGGACGTGGACGTGGCAAAGGCAAAGATGACGACTAGGAAGGAACCAACCTTGAATGGTCATTCTGTACAATGAAGATTGTAGAATGAAATGTTCATCTGTCTAAAATAAACGATACTTTTAAAATGAAAAAAAAAAATGTACAACAATCAACAAAAGAACAAAACATGAAAAACGCCCCCCGGGGGGGGCCCGGGAACCATTTTTTTGCC]


>consensus_2803#4 GACATATCGCGTGGCAAGGACAAGCGTCCAGAAGGCGATGACAATGACGATTCAGACAAG GGTGAAGACGTGAGAGGAGACGGTGGCCGAGGCAACCGCGGCGGTGAGCGTGGGGGACAT GGGGACCGTGGTCGTGGACGTGGACGTGGCAAAGGCAAAGATGACGACTAGGAAGGAACC AACCTTGAATGGTCATTCTGTACAATGAAGATTGTAGAATGAAATGTTCATCTGTCTAAA ATAAACGATACTTTTAAAATGAAAAAAAAAAATGTACAACAATCAACAAAAGAACAAAAC ATGAAAAACGCCCCCCGGGGGGGGCCCGGGAACCATTTTTTTGCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2803#1      ------------------------------------------------------------
consensus_2803#3      ------------------------------------------------------------
consensus_2803#0      AACACCTGAGCAGGAGAAAAGGAAGACAAATCGCGTGGCAAGGACAAGCGTCCAGAAGGC 60
consensus_2803#2      ------------------------------------------------------------
consensus_2803#4      ------------------------------------------------------------
                                                                                  

consensus_2803#1      ------------------------------------------------------------
consensus_2803#3      ------------------------------------------------------------
consensus_2803#0      GATGACAATGACGATTCAGACAAGGGTGAAGACGTGAGAGGAGACGGTGGCCGAGGCAAC 120
consensus_2803#2      ------------------------------------------------------------
consensus_2803#4      ------------------------------------------------------------
                                                                                  

consensus_2803#1      ------------------------------------------------------------
consensus_2803#3      ------------------------------------------------------------
consensus_2803#0      CGCGGCGGTGAGCGTGGGGGACATGGGGACCGTGGTCGTGGACGTGGACGTGGCAAAGGC 180
consensus_2803#2      ------------------------------------------------------------
consensus_2803#4      ------------------------------------------------------------
                                                                                  

consensus_2803#1      ------------------------------------------------------------
consensus_2803#3      ---------------------------------------------------CGAAAGAGG 9
consensus_2803#0      AAAGATGACGACTAGGAAGGAACCAACCTTCTCTCTGAGCCGGTTGCACCCGAGTAGAGG 240
consensus_2803#2      ------------------------------------------------------------
consensus_2803#4      ------------------------------------------------------------
                                                                                  

consensus_2803#1      ------------------------------------GCAGGCAGGACGCCACCATGTACC 24
consensus_2803#3      CGCCATTTTAAGACA-----AAACGCAGCTCGGCCAGCAGGCAGGACGCCACCATGTACC 64
consensus_2803#0      CGCCATTTTAAGACACTGACAAACGCAGCTCGGCCAGCAGGCAGGACGCCACCATGTACC 300
consensus_2803#2      -----------------------------------------CAACACCTGAGCAGGAAGA 19
consensus_2803#4      ------------------------------------------------------------
                                                                                  

consensus_2803#1      CGACCGCTTTGACCCAACTGGCCCGGGGCAACCCGTTCAGCGCGCCCCTCTTTGCCCTCC 84
consensus_2803#3      CGACCGCTTTGACCCAACTGGCCCGGG-CAACCCGTTCAGCGCGCCCCTCTTTGCCCTCC 123
consensus_2803#0      CGACCGCTTTGACCCAACTGGCCCGGGGCAACCCGTTCAGCGCGCCCCTCTTTGCCCTCC 360
consensus_2803#2      CAATCACCATGAGTGACAGAGAAAAGGAAGACAAATC--GCGTGGCAAGGACAAGCGTCC 77
consensus_2803#4      -----------------------------GACATATC--GCGTGGCAAGGACAAGCGTCC 29
                                                    **   *   *** * *         * ***

consensus_2803#1      AGAAAGTCGAGGAGCCGCAACAAAACCTCTCCAGGCAGAACACACGGAAACTGGCCGCAG 144
consensus_2803#3      AGAAAGTCGAGGAGCCGCAACAAAACCTCTCCAGGCAGAACACACGGAAACTGGCCGCAG 183
consensus_2803#0      AGAAAGTCGAGGAGCCGCAACAAAACCTCTCCAGGCAGAACACACGGAAACTGGCCGCAG 420
consensus_2803#2      AGAAGG-CGATGA-CAATGACGAT-TCAGACAAGGGTGAAGACGTGAGAGGAGACGGTGG 134
consensus_2803#4      AGAAGG-CGATGA-CAATGACGAT-TCAGACAAGGGTGAAGACGTGAGAGGAGACGGTGG 86
                      **** * *** ** *    ** *   *   * ***  *** **  *  *   * * *  *

consensus_2803#1      CCGC--CACCTCAGACGGTAATCCCGGAGCGGACACC-ACTGCAGCTATGCTACGTTAGC 201
consensus_2803#3      CCGC--CACCTCAGACGAGG-----GGGACAGTTGCG-AGTTCGGCTCTCAGAAGTATCT 235
consensus_2803#0      CCGC--CACCTCAGACGA--------GGTGAGCTGCG-AGTTCGGCTCTTCAAAATACTA 469
consensus_2803#2      CCGAGGCAACCGCGGCGGTGAGCGTGGGGGACATGGGGACCGTGGTCGTG-GACGTGGAC 193
consensus_2803#4      CCGAGGCAACCGCGGCGGTGAGCGTGGGGGACATGGGGACCGTGGTCGTG-GACGTGGAC 145
                      ***   ** *   * **         *           *     *   *   *  *    

consensus_2803#1      ATTGGCAGCTAGACATTTCAGGTTGCCAGAGGAGGGACATCGTAGGT-CAACGTGCACAG 260
consensus_2803#3      CGTCCTGTGTGGATTTGGTGGGATTCT-GAGTTGTGGCACTACACACACAGCGGGTGTCC 294
consensus_2803#0      TGCCCTGTGTGGGT-TTGGGGGTATCCTGAGCTGCGGCCTCACACACACGGCAGTGGTGC 528
consensus_2803#2      GTGGCAAAGGCAAAGATGACGACTAGGAAGGAACCAACCTTGAATGGTCATTCTGTACAA 253
consensus_2803#4      GTGGCAAAGGCAAAGATGACGACTAGGAAGGAACCAACCTTGAATGGTCATTCTGTACAA 205
                                          *         *      *     *    *           

consensus_2803#1      GGATTG--CTGATCAACCGCATGTACCGTTGTCATTGAGCATAGCTACTTAAGAATTTAG 318
consensus_2803#3      CGCTCGATCTGGTCAAATGCA-GAATGCAGGTCAACCCAGACAAATACAAAAGCATT-AG 352
consensus_2803#0      CCCTCGACCTTGTCAAGTGCC-GCCTGCAGGTCAACCCAGACAAATACAAAAGCATCGGC 587
consensus_2803#2      TGAAGA--TTGTAGAATGAAATGTTCATCTGTCTAAAATAAAAAATACTTTTAAAAAGAA 311
consensus_2803#4      TGAAGA--TTGTAGAATGAAATGTTCATCTGTCTAAAATAAACGATACTTTTAAAATGAA 263
                               *    **      *       ***       *    ***      *     

consensus_2803#1      CCCAAGTGCAGGGCTTTCACCAGGCCACAAGCCTGTGGAGGACAAGG--AAGGACAAAGT 376
consensus_2803#3      CA---------------------------------------------------------- 354
consensus_2803#0      AACGGCTTCTCTGTGACGGTGAAGGAGGACGGTGTTCGAGGCTTGGCC-AAGGGATGGGC 646
consensus_2803#2      AAAAAAAAAGG-------ATCAACAGAAAAAC-----------------CCCGGGGGGGG 347
consensus_2803#4      AAAAAAAAATGTACAACAATCAACAAAAGAACAAAACATGAAAAACGCCCCCCGGGGGGG 323
                                                                                  

consensus_2803#1      GCTAGCTAACATGGTCGCTGCAGGACACTGACCAAAACAGCTTTGCTGCAACCATCCTGC 436
consensus_2803#3      ------------------------------------------------------------
consensus_2803#0      CCCCACCTTCATCGGCTACTCCATGCAGGGGCTCTGCAAGTTTGGCTTCTACGAAGTGTT 706
consensus_2803#2      CCCCGGAAACCAATTTTTGGC--------------------------------------- 368
consensus_2803#4      GCCCGGGAACCATTTTTTTGCC-------------------------------------- 345
                                                                                  

consensus_2803#1      ATAGTTGTAGTTTGGTGTTTGCCACCCTAAAATGCTAAGTCTGCCCTGGAGGTGCACTTC 496
consensus_2803#3      ------------------------------------------------------------
consensus_2803#0      CAAGATCTTTTACAGTGACCTGC-TGGGAGAGGAGAACACCTACCTCTGGAGGACATCGC 765
consensus_2803#2      ------------------------------------------------------------
consensus_2803#4      ------------------------------------------------------------
                                                                                  

consensus_2803#1      CGTGTGTCCCTTCTATGTGTGGTA------------------------------------ 520
consensus_2803#3      ------------------------------------------------------------
consensus_2803#0      TGTACTTGGCTGCGTCAGCCAGCGCCGAGTTCTTTGCAGACATTGCTCTGGCTCCAATGG 825
consensus_2803#2      ------------------------------------------------------------
consensus_2803#4      ------------------------------------------------------------
                                                                                  

consensus_2803#1      ------------------------------------
consensus_2803#3      ------------------------------------
consensus_2803#0      AGGCCGTCAAGGTTCGGATCCAAACCCAGCCAAGCT 861
consensus_2803#2      ------------------------------------
consensus_2803#4      ------------------------------------
                                                          




Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)