Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2810 cluster # 2810       Sequences # 22       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2810#0 length = 724 sequences # 21  
consensus_2810#1 length = 371 sequences # 1  

consensusID : consensus_2810#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 21
consensus length = 724
fasta sequence
                              [TTCTTTTTCCTTTCGGCCATTTTCCTCCCTCGTAGGGAAGTAAGCAACCATGGCCCCTAGCCGGAATGGAATGATTCTGAACCCACACTTTCACAAAG-ACTGGCAGAAAAGAGTGCGCACCTGGTTCAACCAGCCAGCTAGGAAGATCCGCAGGCGAAAGGCTCGTCTGGCCAAAGCCCGCCTTGTTGCTCCTCGTCCAGTTGCTGGACCCTTGAGGCCACAGGTCAGGTGTCCCACCGTCAGGTACCACACGAAGGTCCGTGCCGGACGTGGCTTCACATTGGAAGAACTGAAGGCAGCAGGCATCCAC-AAGAAGACAGCCCGCACTATTGGCATCGCCGTCGACGCTCGACGCCGTAACAGGTCCACAGAATCCCTGCAGGCCAACGTGCAGCGCCTGAAGGAGTACCGCTCTAAACTGATCCTGTTCCCCAGGAAGGCCTCAGCTCCCAAGAAGGGAGACAGCACTGAGGAGGAACTCAAGATGGCCACTCAGCTCACTGGTCCAGTCATGCCCATCAAAACTGTGCATAAGAGGGAGAAGGCCCGGGTCATCTCTGAGGATGAGAAGAACTTCAAGGCCTTCGCCAGCCTGCGCATGGCCCGCGCCAACGCTCGTCTCTTCGGCATTCGTGCCAAGAGAGCCAAGGAAGCTGCCGAGCAAGACGTTGAGAAGAAGAAGTGAGAACGGTCACTATGGAACTTTACATAATAAAGTGTTTAA]

[+] EMBL BU806961             [TTCTTTTTCCTTTCGGCCATTTTCCTCCCTCGTAGGGAAGTAAGCAACCATGGCCCCTAGCCGGAATGGAATGATTCTGAACCCACACTTTCACAAAG ACTGGCAGAAAAGAGTGCGCACCTGGTTCAACCAGCCAGCTAGGAAGATCCGCAGGCGAAAGGCTCGTCTGGTCAAAGCCCGCCTTGTTGCTCCTCGTCCAGTTGCTGGACCCTTGAGGCCACTTGTCAGGTGTCCCACCGTCAGGTACCACACGAAGGTCCGTGCCGGACGTGGCTTCACATTGGAAGAACTGAAGGCAGCAGGCATCCAC AAGAAGACAGCCCGCACTATTGGCATCGCCGTCGACGCTCGACGCCGTAACAGGTCCACAGAATCCCTGCAGGCCAACGTGCAGCGCCTGAAGGAGTACCGCTCTAAACTGATCCTGTTCCCCAGGAAGGCCTCAGCTCCCAAGAAGGGAGACAGCACTGAGGAGGAACTCAAGATGGCCACTCAGCTCACTGGTCCAGTCATGCCCATCAAAACTGTGCATAAGAGGGAGAAGGCCCGGGTCATCTCTGAGGATGAGAAGAACTTCAAGGCCTTCGCCAGC                                                                                                                                    ]
[+] EMBL CA846192             [                 CCTTTTCCTCCCTC    GGAAGTAAGCAACCATGGCCCCTAGCCGGACTGGAATGATTCTGAACCCACACTTTCACAAAG ACTGGCAGAAAAGAGTGCGCACCTGGTTCAACCAGCCAGCTAGGAAGATCCGCAGGCGAAAGGCTCGTCTGGCCAAAGCCCGCCTTGTTGCTCCTCGTCCAGTTGCTGGACCCTTGAGGCCACAGGTCAGGTGTCCCACCGTCAGGTACCACACGAAGGTCCGTGCCGGACGTGGCTTCACATTGGAAGAACTGAAGGCAGCAGGCATCCAC AAGAAGACAGCCCGCACTATTGGCATCGCCGTCGACGCTCGACGCCGTAACAGGTCCACAGAATCCCTGCAGGCCAACGTGCAGCGCCTGAAGGAGTACCGCTCTAAACTGATCC                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BU805731             [                   TTTTCCTCCCTCGTAGGGAAGTAAGCAACCATGGCCCCTAGCCGGAATGGAATGATTCTGAACCCACACTTTCACAAAG ACTGGCAGAAAAGAGTGCGCACCTGGTTCAACCAGCCAGCTAGGAAGATCCGCAGGCGAAAGGCTCGTCTGGTCAAAGCCCGCCTTGTTGCTCCTCGTCCAGTTGCTGGACCCTTGAGGCCACAGGTCAGGTGTCCCACCGTCAGGTACCACACGAAGGTCCGTGCCGGACGTGGCTTCACATTGGAAGAACTGAAGGCAGCAGGCATCCAC AAGAAGACAGCCCGCACTATTGGCATCGCCGTCGACGCTCGACGCCGTAACAGGTCCACAGAATCCCTGCAGGCCAACGTGCAGCGCCTGAAGGAGTACCGCTCTAAACTGATCCTGTTCCCCAGGAAGGCCTCAGCTCCCAAGAAGGGAGACAGCACTGAGGAGGAAC                                                                                                                                                                                                                                                     ]
[+] EMBL FR0057566            [                            CTCGTAAGGAAGTAAGCAACCATGGTCCCTAGCCGGAATGGAATGATTCTGAACCCACACTTTCACAAAG ACTGGCAGAAAAGAGTGCGCACCTGGTTCAACCAGCCAGCTAGGAAGATCCGCAGGCGAAAGGCTCGTCTGGTCAAAGCCCGCCTTGTTGCTCCTCGTCCAGTTGCTGGACCCTTGAGGCCACAGGTCAGGTGTCCCACCGTCAGGTACCACACGAAGGTCCGTGCCGGACGTGGCTTCACATTGGCAGACCTGAAGGCAGCAGGCATCCAC AAGAAGACAGCCCGCACTATTGGCATCGCCGTCGACGCTCGACGCCGTAACAGGTCCACAGAATCCCTGCAGGCCAACGTGCAGCGCCTGAAGGAATACCGCTCTAAACTGATCCTG                                                                                                                                                                                                                                                                                                         ]
[+] EMBL FR0056259            [                                     AAGTAAGCAACCATGGCCCCTAGCCGGAATGGAATGATTCTGAACCCACACTTTCACAAAG ACTGGCAGAAAAGAGTGCGCACCTGGTTCAACCAGCCAGCTAGGAAGATCCGCAGGCGAAAGGCTCGTCTGGCCAAAGCCCGCCTTGTTGCTCCTCGTCCAGTTGCTGGACCCTTGAGGCCACAGGTCAGGTGTCCCACCGTCAGGTACCACACGAAGGTCCGTGCCGGACGTGGCTTCACATTGGCAGAACTGAAGGCAGCAGGCATCCAC AAGAAGACAGCCCGCACTATTGGCATCGCCGTCGACGCTCGACGCCGTAACAGGTCCACAGAATCCCTGCAGGCCAACGGGCAGCGCCTGAAGGAGTACCGCTCTAAACTGGACCTGTTCCCCAGGAAGGCCTCAGCTCCC                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA845786             [                                       GTAAGCAACCATGGCCCCTAGCCGGAATGGAATGATTCTGAACCCACACTTTCACAAAG ACTGGCAGAAAAGAGTGCGCACCTGGTTCAACCAGCCAGCTAGGAAGATCCGCAGGCGAAAGGCTCGTCTGGCCAAAGCCCGCCTTGTTGCTCCTCGTCCAGTTGCTGGACCCTTGAGGCCACAGGTCAGGTGTCCCACCGTCAGGTACCACACGAAGGTCCGTGCCGGACGTGGCTTCACATTGGAAGAACTGAAGGCAGCAGGCATCCAC AAGAAGACAGCCCGCACTATTGGCATCGCCGTCGACGCTCGACGCCGTAACAGGTCCACAGAATCCCTGCAGGCCAACGTGCAGCGCCTGAAGGAGTACCGCTCTAAACTGATCCTGTTCCCCAGGAAGGCCTCAGCTCCCAAGAAGGGAGACAGCACTGAGGAGGAACTCAAGATGGCCACTCAG                                                                                                                                                                                                                                    ]
[+] EMBL CA330371             [                                       GTAAGCAACCATGGCCCCTAGCCGGAATGGAATGATTCTGAACCCACACTTTCACAAAG ACTGGCAGAAAAGAGTGCGCACCTGGTTCAACCAGCCAGCTAGGAAGATCCGCAGGCGAAAGGCTCGTCTGGCCAAAGCCCGCCTTGTTGCTCCTCGTCCAGTTGCTGGACCCTTGAGGCCACAGGTCAGGTGTCCCACCGTCAGGTACCACACGAAGGTCCGTGCCGGACGTGGCTTCACATTGGAAGAACTGAAGGCAGCAGGCATCCAC AAGAAGACAGCCCGCACTATTGGCATCGCCGTCGACGCTCGACGCCGTAACAGGTCCACAGAATCCCTGCAGGCCAACGTGCAGCGCCTGAAGGAGTACCGCTCTAAACTGATCCTGTTCCCCAGGAAGGCCTCAGCTCCCAAGAAGGGAGACAGCACTGAGGAGGAACTCAAGATGGCCACTCAGCTCACTGGTCCAGTCATGCCCATCAAAACTGTGCATAAGAGGGAGAAGGCCCGGGTCATCTCTGAGGATGAGAAGAACTTCAAGGCCTTCGCCAGCCTGCGCATGGCCCGCGCCA                                                                                                                 ]
[+] EMBL CA846576             [                                          AGCAACCATGGCCCCTAGCCGGAATGGAATGATTCTGAACCCACACTTTCACAAAG ACTGGCAGAAAAGAGTGCGCACCTGGTTCAACCAGCCAGCTAGGAAGATCCGCAGGCGAAAGGCTCGTCTGGTCAAAGCCCGCCTTGTTGCTCCTCGTCCAGTTGCTGGACCCTTGAGGCCACAGGTCAGGTGTCCCACCGTCAGGTACCACACGAAGGTCCGTGCCGGACGTGGCTTCACATTGGAAGAACTGAAGGCAGCAGGCATCCAC AAGAAGACAGCCCGCACTATTGGCATCGCCGTCGACGCTCGACGCCGTAACAGGTCCACAGAATCCCTGCAGGCCAACGTGCAGCGCCTGAAGGAGTACCGCTCTAAACTGATCCTGTTCCCCAGGAAGGCCTCAGCTCCCAAGAAGGGAGACAGCACTGAGGAGGAACTCAAGATGGCCACTCAGCTCACTGGTCCAGTCATGCCCATCAAAACTGTGCATAAGAGGGAGAAGGCCCGGGTCATCTCTGAGGATGAGAAGAACTTCAAGGCCTTCGCCAGCCTGCGCATGGCCCGCGCCAACGCTCGTCTCTTCGGCATTCGTGCCAAGAGAGCCAAGGAAGCTGCCGAGCAAGACGTTGAGAAGAAGAAGTGAGAACGGTCACTATGGAA                      ]
[+] EMBL CA846803             [                                               CCATGGCCCCTAGCCGGAATGGAATGATTCTGAACCCACACTTTCACAAAG ACTGGCAGAAAAGAGTGCGCACCTGGTTCAACCAGCCAGCTAGGAAGATCCGCAGGCGAAAGGCTCGTCTGGTCAAAGCCCGCCTTGTTGCTCCTCGTCCAGTTGCTGGACCCTTGAGGCCACAGGTCAGGTGTCCCACCGTCAGGTACCACACGAAGGTCCGTGCCGGACGTGGCTTCACATTGGAAGAACTGAAGGCAGCAGGCATCCAC AAGAAGACAGCCCGCACTATTGGCATCGCCGTCGACGCTCGACGCCGTAACAGGTCCACAGAATCCCTGCAGGCCAACGTGCAGCGCCTGAAGGAGTACCGCTCTAAACTGATCCTGTTCCCCAGGAAGGCCTCAGCTCCCAAGAAGGGAGACAGCACTGAGGAGGAACTCAAGATGGCCACTCAGCTCACTGGTCCAGTCATGCCCATCAAAACTGTGCATAAGAGGGAGAAGGCCCGGGTCATCTCTGAGGATGAGAAGAACTTCAAGGCCTTCGCCAGCCTGCGCATGGCCCGCGCCAACGCTCGTCTCTTCGGCATTCGTGCCAAGAGAGCCAAGGAA                                                                        ]
[+] EMBL CA845722             [                                               CCATGGCCCCTAGCCGGAATGGAATGATTCTGAACCCACACTTTCACAAAG ACTGGCAGAAAAGAGTGCGCACCTGGTTCAACCAGCCAGCTAGGAAGATCCGCAGGCGAAAGGCTCGTCTGGCCAAAGCCCGCCTTGTTGCTCCTCGTCCAGTTGCTGGACCCTTGAGGCCACAGGTCAGGTGTCCCACCGTCAGGTACCACACGAAGGTCCGTGCCGGACGTGGCTTCACATTGGAAGAACTGAAGGCAGCAGGCATCCAC AAGAAGACAGCCCGCACTATTGGCATCGCCGTCGACGCTCGACGCCGTAACAGGTCCACAGAATCCCTGCAGGCCAACGTGCAGCGCCTGAAGGAGTACCGCTCTAAACTGATCCTGTTCCCCAGGAAGGCCTCAGCTCCCAAGAAGGGAGACAGCACTGAGGAGGAACTCAAGATGGCCACTCAGCTCACTGGT                                                                                                                                                                                                                           ]
[+] EMBL FR0056092            [                                                              GGAATGGAATGATTCTGAACCCACACTTTCACAAAG ACTGGCAGAAAAGAGTGCGCACCTGGTTCAACCAGCCAGCTAGGAAGATCCGCAGGCGAAAGGCTCGTCTGGCCAAAGCCCGCCTTGTTGCTCCTCGTCCAGTTGCTGGACCCTTGAGGCCACAGGTCAGGTGTCCCACCGTCAGGTACCACACGAAGGTCCGTGCCGGACGTGGCTTCACATTGGAAGAACTGAAGGCAGCAGGCATCCAC AAGAAGACAGCCCGCACTATTGGCATCGCCGTCGACGCTCGACGCCGTAACAGGTCCACAGAATCCCTGCAGGCCAACGTGCAGCGCCTGAAGGAGTACCGCTCTAAACTGATCCTGTTCCCCAGGAAGGCCTCAGCTCCCAGGAAGGGAGACAGCACTGAGGAGGAACTCAAGATGGCCACTCAGCTCACTGGTCCA                                                                                                                                                                                                                        ]
[+] EMBL FR0056403            [                                                                   GGAATGATTCTGAACCCACACTTTCACAAAG ACTGGCAGAAAAGAGTGCGCACCTGGTTCAACCAGCCAGCTAGGAAGATCCGCAGGCGAAAGGCTCGTCTGGTCAAAGCCCGCCTTGTTGCTCCTCGTCCAGTTGCTGGACCCTTGAGGCCACAGGTCAGGTGTCCCACCGTCAGGTACCACACGAAGGTCCGTGCCGGACGTGGCTTCACATTGGAAGAACTGAAGGCAGCAGGCATCCAC AAGAAGACAGCCCGCACTATTGGCATCGCCGTCGACGCTCGACGCCGTAACAGGTCCACAGAATCCCTGCAGGCCAACGTGCAGCGCCTGAAGGAGTACCGCTCTAAACTGATCCTGTTCCCCAGGAAGGCCTCAGCTCCCAAGAGGGGAGACAGCACTGAGG                                                                                                                                                                                                                                                           ]
[+] EMBL CA330364             [                                                                      ATGATTCTGAACCCACACTTTCACAAAG ACTGTCAGAAAAGAGTGCGCACCTGGTTCAACCAGCCAGCTAGGAAGATCCGCAGGCGAAAGGCTCGTCTGGCCAAAGCCCGCCTTGTTGCTCCTCGTCCAGTTGCTGGACCCTTGAGGCCACAGGTCAGGTGTCCCACCGTCAGGTACCACACGAAGGTCCGTGCCGGACGTGGCTTCACATTGGAAGAACTGAAGGCAGCAGGCATCCTCTATGAAGACAGCCCGCACTATTGGCATCGCCGTCGACGCTCGACGCCGTAACAGGTCCACAGAATCCCTGCAGGCCAACGTGCAGCGCCTGAAGGAGTACCGCTCTAAACTGATCCTGTTCCCCAGGAAGGCCTCAGCTCCCAAGAAGGGAGACAGCACTGAGGAGGAACTCAAGATGGCCACTCAGCTCACTGGTCCAGTCATGCCCATCAAAACTGTGCATAAGAGGGAGAAGGCCCGGGTCATCTCTGAGGATGAGAAGAACTTCAAGGCCTTCGCCAGCCTGCGCATGGCCCGCGCCAACGCTCGTCTCTTCG                                                                                                  ]
[+] EMBL CA844767             [                                                                       TGATTCTGAACCCACACTTTCACAAAGCACTGGCAGAAAAGAGTGCGCACCTGGTTCAACCAGCCAGCTAGGAAGATCCGCAGGCGAAAGGCTCGTCTGGCCAAAGCCCGCCTTGTTGCTCCTCGTCCAGTTGCTGGACCCTTGAGGCCACAGGTCAGGTGTCCCACCGTCAGGTACCACACGAAGGTCCGTGCCGGACGTGGCTTCACATTGGAAGAACTGAAGGCAGCAGGCATCCAC AAGAAGACAGCCCGCACTATTGGCATCGCCGTCGACGCTCGACGCCGTAACAGGTCCACAGAATCCCTGCAGGCCAACGTGCAGCGCCTGAAGGAGTACCGCTCTAAACTGATCCTGTTCCCCAGGAAGGCCTCAGCTCCCAAGAAGGGAGACAGCACTGAGGAGGAACTCAAGATGGCCACTCAGCTCACTGGTCCAGTCATGCCCATCAAAACTGTGCATAAGAGGGAGAAGGCCCGGGTCATCTCTGAGGATGAGAAGAACTTCAAGGCCTTCGCCAGCCTGCGCATGGCCCGCGCCAACGCTCGTCTCTTCGGCATTCGTGCCAAGAGAGCCAAGGAAGCTGCCGA                                                                ]
[+] EMBL FR0057612            [                                                                           TCTGAACCCACACTTTCACAAAG ACTGGCAGAAAAGAGTGCGCACCTGGTTCAACCAGCCAGCTAGGAAGATCCGCAGGCGAAAGGCTCGTCTGGTCAAAGCCCGCCTTGTTGCTCCTCGTCCAGTTGCTGGACCCTTGAGGCCACAGGTCAGGTGTCCCACCGTCAGGTACCACACGAAGGTCCGTGCCGGACGTGGCTTCACATTGGAAGAACTGAAGGCAGCAGGCATCCAC AAGAAGACAGCCCGCACTATTGGCATCGCCGTCGACGCTCGACGCCGTAACAGGTCCACAGAATCCCTGCAGGCCAACGTGCAGCGCCTGAAGGAGTACCGCTCTAAACTGATCCTGTTCCCCAGGAAGGCCTCAGCTCCCAAGAAGGGAGACAGCACTGAGGAGGAACTCAAGATGGCCACTCAGCTCACTGGTCCAGTCATGCCCATCAGAACTGTGCATAAGAGGGAGAAAGCCCG                                                                                                                                                                               ]
[+] EMBL FR0056324            [                                                                           TCTGAACCCACACTTTCACAAAG ACTGGCAGAAAAGAGTGCGCACCTGGTTCAACCAGCCAGCTAGGAAGATCCGCAGGCGAAAGGCTCGTCTGGTCAAAGCCCGCCTTGTTGCTCCTCGTCCAGTTGCTGGACCCTTGAGGCCACAGGTCAGGTGTCCCACCGTCAGGTACCACACGAACGTCCGTGCCGGACGTGGCTTCACATTGGAAGAACTGAAGGCAGCAGGCATCCAC AAGAAGACAGCCCGCACTATTGGCATCGCCGTCGACGCTCGACGCCGTAACACGTCCACAGAATCCCTGCAGGCCAACGTGCAGCGCCTGAAGGAGTACCGCTCTAAACTGAT                                                                                                                                                                                                                                                                                                             ]
[+] EMBL FR0056335            [                                                                              GAACCCACACTTTCACAAAG ACTGGCAGAAAAGAGTGCGCACCTGGTTCAACCAGCCAGCTAGGAAGATCCGCAGGCGAAAGGCTCGTCTGGCCAAAGCCCGCCTTGTTGCTCCTCGTCCAGTTGCTGGACCCTTGAGGCCACAGGTCAGGTGTCCCACCGTCAGGTACCACACGAAGGTCCGTGCCGGACGTGGCTTCACATTGGAAGAACTGAAGGCAGCAGGCATCCAC AAGAAGACAGCCCGCACTATTGGCATCGCCGTCGACGCTCGACGCCGTAACAGGTCCACAGAATCCCTGCAGGCCAACGTGCAGCGCCTGAAGGAGTACCGCTCTAAACTGATCCTGTTCCCCAGGAAGGCCTCAGCTCCCAAGAAGGGAGACAGCACTGAGGAGGAACTCAAGATGGGCACTCAGCTCACTGGTCCAGTCATGCCCATCAAAACTGTGCATAAGACGGAGAAGGCCCGGGTCACCTCT                                                                                                                                                                     ]
[+] EMBL CA844929             [                                                                                                           AAAAGAGTGCGCACCTGGTTCAACCAGCCAGCTAGGAAGATCCGCAGGCGAAAGGCTCGTCTGGCCAAAGCCCGCCTTGTTGCTCCTCGTCCAGTTGCTGGACCCTTGAGGCCACAGGTCAGGTGTCCCACCGTCAGGTACCACACGAAGGTCCGTGCCGGACGTGGCTT TTTTTGGAAGAACTGAAGGCAGCAGGCATCCAC AAGAAGACAGCCCGCACTATTGGCATCGCCGTCGACGCTCGACGCCGTAACAGGTCCACAGAATCCCTGCAGGCCAACGTGCAGCGCCTGAAGGAGTACCGCTCTAAACTGATCCTGTTCCCCAGGAAGGCCTCAGCTCCCAAGAAGGGAGACAGCACTGAGGAGGAACTCAAGATGGCCACTCAGCTCACTGGT                                                                                                                                                                                                                           ]
[+] EMBL CA844709             [                                                                                                                                           TAGGAAGATCCGCAGGCGAAAGGCTCGTCTGGCC AACTCAAAAGGGTTGCTCCTCGTCCAGTTGCTGGACCCTTGAGGCCACAGGTCAGGTGTCCCACCGTCAGGTACCACACGAAGGTCCGTGCCGGACGTGGCTTCACATTGGAAGAACTGAAGGCAGCAGGCATCCAC AAGAAGACAGCCCGCACTATTGGGATCGCCGTCGACGCTCGACGCCGTAACAGGTCCACAGAATCCCTGCAG                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CA330314             [                                                                                                                                                                                                                                                                                                           GCAGGCATCCAC AAGAAGACAGCCCCCTCTATTGGCATCGCCGTCGACGCTGGACTCTGTAACAGGTCCACAGAATCCCTGCAGGCCAACGTGCAGCGCCTGAAGGAGTACCGCTCTAAACTGATCCTGTTCCCCAGGAAGGCCTCAGCTCCCAAGAAGGGAGGCAGCCCTGAGGAGGAACTCAAGATGGCCACTCAGCTCACTAATCCAGTCGTGCCCATCAAAATTGTGCATAAGAGGGAGAAGTCCCGGGTCATCTCTGAGGATGAGAAGAt                                                                                                                                                       ]
[+] EMBL CA333418             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GAGAAGAACTTCAAGGCCTTCGCCAGCCTGCGCATGGCCCGCGCCAACGCTCGTCTCTTCGGCATTCGTGCCAAGAGAGCCAAGGAAGCTGCCGAGCAAGACGTTGAGAAGAAGAAGTGAGAACGGTCACTATGGAACTTTACATAATAAAGTGTTTAA]


>consensus_2810#0 TTCTTTTTCCTTTCGGCCATTTTCCTCCCTCGTAGGGAAGTAAGCAACCATGGCCCCTAG CCGGAATGGAATGATTCTGAACCCACACTTTCACAAAGACTGGCAGAAAAGAGTGCGCAC CTGGTTCAACCAGCCAGCTAGGAAGATCCGCAGGCGAAAGGCTCGTCTGGCCAAAGCCCG CCTTGTTGCTCCTCGTCCAGTTGCTGGACCCTTGAGGCCACAGGTCAGGTGTCCCACCGT CAGGTACCACACGAAGGTCCGTGCCGGACGTGGCTTCACATTGGAAGAACTGAAGGCAGC AGGCATCCACAAGAAGACAGCCCGCACTATTGGCATCGCCGTCGACGCTCGACGCCGTAA CAGGTCCACAGAATCCCTGCAGGCCAACGTGCAGCGCCTGAAGGAGTACCGCTCTAAACT GATCCTGTTCCCCAGGAAGGCCTCAGCTCCCAAGAAGGGAGACAGCACTGAGGAGGAACT CAAGATGGCCACTCAGCTCACTGGTCCAGTCATGCCCATCAAAACTGTGCATAAGAGGGA GAAGGCCCGGGTCATCTCTGAGGATGAGAAGAACTTCAAGGCCTTCGCCAGCCTGCGCAT GGCCCGCGCCAACGCTCGTCTCTTCGGCATTCGTGCCAAGAGAGCCAAGGAAGCTGCCGA GCAAGACGTTGAGAAGAAGAAGTGAGAACGGTCACTATGGAACTTTACATAATAAAGTGT TTAA



consensusID : consensus_2810#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 371
fasta sequence
                              [TTGTTGTAGACATGCATCCGCTTTGTTATTAAATATCATCTGAAGCTAGTGATACACGGCTGTTTCTGTTAGCATTGCAGTAACAGGCCGACTTGTGCACCTTATTTTACTGTCAAACCCCCCCAAAATAAAATTCAAATATGTTGACCCGAAGTCGCTAAGAGTATTACGCCAGGAATGTGACTTGGTGGATTTCCAAAGAGTAGTTGTCTGGTTTACCCATAGTTAAGCATGTTAGGCGGATCTCCGAATGACATGATGGTGTGCCGGCGAAAGAGCGTGATTGGACCCATGTGGCTTTGCTGTTTTGCAGGGAAGGAAGCAACCATGGCCCCTAGCCGGAATGGAATGATTCTGAACCCACACTTTCA]

[+] EMBL FR0061643            [TTGTTGTAGACATGCATCCGCTTTGTTATTAAATATCATCTGAAGCTAGTGATACACGGCTGTTTCTGTTAGCATTGCAGTAACAGGCCGACTTGTGCACCTTATTTTACTGTCAAACCCCCCCAAAATAAAATTCAAATATGTTGACCCGAAGTCGCTAAGAGTATTACGCCAGGAATGTGACTTGGTGGATTTCCAAAGAGTAGTTGTCTGGTTTACCCATAGTTAAGCATGTTAGGCGGATCTCCGAATGACATGATGGTGTGCCGGCGAAAGAGCGTGATTGGACCCATGTGGCTTTGCTGTTTTGCAGGGAAGGAAGCAACCATGGCCCCTAGCCGGAATGGAATGATTCTGAACCCACACTTTCA]


>consensus_2810#1 TTGTTGTAGACATGCATCCGCTTTGTTATTAAATATCATCTGAAGCTAGTGATACACGGC TGTTTCTGTTAGCATTGCAGTAACAGGCCGACTTGTGCACCTTATTTTACTGTCAAACCC CCCCAAAATAAAATTCAAATATGTTGACCCGAAGTCGCTAAGAGTATTACGCCAGGAATG TGACTTGGTGGATTTCCAAAGAGTAGTTGTCTGGTTTACCCATAGTTAAGCATGTTAGGC GGATCTCCGAATGACATGATGGTGTGCCGGCGAAAGAGCGTGATTGGACCCATGTGGCTT TGCTGTTTTGCAGGGAAGGAAGCAACCATGGCCCCTAGCCGGAATGGAATGATTCTGAAC CCACACTTTCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2810#0      TTCTTTTTCCTTTCGGCCATTTTCCTCCCTCGTAGGGAAGTAAGCAACCATGGCCCCTAG 60
consensus_2810#1      ------------------------------------------------------------
                                                                                  

consensus_2810#0      CCGGAATGGAATGATTCTGAACCCACACTTTCACAAAGACTGGCAGAAAAGAGTGCGCAC 120
consensus_2810#1      ------------------------------------------------------------
                                                                                  

consensus_2810#0      CTGGTTCAACCAGCCAGCTAGGAAGATCCGCAGGCGAAAGGCTCGTCTGGCCAAAGCCCG 180
consensus_2810#1      ------------------------------------------------------------
                                                                                  

consensus_2810#0      CCTTGTTGCTCCTCGTCCAGTTGCTGGACCCTTGAGGCCACAGGTCAGGTGTCCCACCGT 240
consensus_2810#1      ------------------------------------------------------------
                                                                                  

consensus_2810#0      CAGGTACCACACGAAGGTCCGTGCCGGACGTGGCTTCACATTGGAAGAACTGAAGGCAGC 300
consensus_2810#1      ------------------TTGTTGTAGACATGCATCCGCTTTGTTA---TTAAATATCAT 39
                                          **    *** **  * * * ***  *    * **      

consensus_2810#0      AGGCATCCACAAGAAGACAGCCCGCACTATTGGCATCGCCGTCGACGCTCGACGCCGTAA 360
consensus_2810#1      CTGAAGCTAGTGATACACGGCTGTTTCTGTTAGCATTGCAGTAACAGGCCGACTT----- 94
                        * * * *     * ** **     ** ** **** ** **    *  ****       

consensus_2810#0      CAGGTCCACAGAATCCCTGCAGGCCAACGTGCAGCGCCTGAAGGAGTACCGCTCTAAACT 420
consensus_2810#1      ---GTGCACCTTATTT-TACTGTCAAACC-----CCCCCAAAATAAAATTCAAATATGTT 145
                         ** ***   **   * * * * ***      * **  **  *  *      **   *

consensus_2810#0      GATCCTGTTCCCCAGGAAGGCCTCAGCTCCCAAGAAGGGAGACAGCACTGAGGAGGAACT 480
consensus_2810#1      GACCCGAAGTCGCTAAGAGTATTACGCC-------AGGAATGTGACTTGGTGGATTTCCA 198
                      ** **     * *    **   *  **        *** *     *   * ***    * 

consensus_2810#0      CAAGATGGCCACTCAGCTCACTGGT--CCAGTCATGCCCATCAAAACTGTGCATAAGAGG 538
consensus_2810#1      AAGAGTAGTTGTCTGGTTTACCCATAGTTAAGCATGTTAGGCGGATCTCCGAATGACATG 258
                       *   * *       * * **   *    *  ****     *  * **  * ** * * *

consensus_2810#0      GAGAAGGCCCGGGTCATCTCTGAGGATGAGAAGAACTTCAAGGCCTTCGCCAGCCTGCGC 598
consensus_2810#1      ATGGTGTGCCGGCGAAA----GAGCGTGATTGGACCCATGTGGCTTT-GCTG--TTTTGC 311
                        *  *  ****   *     ***  ***   ** *     *** ** **     *  **

consensus_2810#0      ATGGCCCGCGCCAACGCTCGTCTCTTCGGCATTCGTGCCAAGAGAGCCAAGGAAGCTGCC 658
consensus_2810#1      AGGGAAGGAAGCAACCATGGCCCCT----------AGCCGGAATGG--AATGATTCTG-- 357
                      * **   *   ****  * * * **           ***   *  *  ** **  ***  

consensus_2810#0      GAGCAAGACGTTGAGAAGAAGAAGTGAGAACGGTCACTATGGAACTTTACATAATAAAGT 718
consensus_2810#1      AACCCACACTTTCA---------------------------------------------- 371
                       * * * ** ** *                                              

consensus_2810#0      GTTTAA 724
consensus_2810#1      ------
                            




Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)