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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2812#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 780 fasta sequence
[AGTCAAACACTCCTCGTCCTCCTGAAGACAAGAAGGTCCAAATACTGCAGGAAATATGGCAGCA-CCATC-TCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGGTCCTCTACTTC-ACTGAGGCAGAGATGCCAAAAGATGCAGAGCAACAACAACAACAGCAGCAACAACAACAAATGAGGCTGCCAGACTTTCTGAAGAGCTTGAAAACTAAAGGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATGCTCCGTACGCCCTCAGCGTTGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTTGAGGATTTCTTAGGAAGCACCAAGAAGCACTACAGAGCAGAGCTGGAGTCTGTGGATTTCCGTGCTGCAGCAGAGACGTCACGCAGCAACATCAACAGCTGGGTGGAGAAACAAACAGAGGGTAAAATTAAGGATCTTCTGGCAAAGGGGATTGTGACCGGTGACACCAGGTTGGTGCTGGTCAACGCCATCTACTTCAAAGGCAACTGGGACAAGCAGTTCAAGGAAAAAGCCACCAGAGATGCAACATTTCACATCTCCAAGAACTCCTCCAAGCCGGTGAAAATGATGCACCAGTCATCCAAGTTCCCCTT]
[+] EMBL BU807386 [AGTCAAACACTCCTCGTCCTCCTGAAGACAAGAAGGTCCAAATACTGCAGGAAATATGGCAGCA CCATC TCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGGTCCTCTACTTC ACTGAGGCAGAGATGCCAAAAGATGCAGAGCAACAACAACAACAGCAGCAACAACAACAAATGAGGCTGCCAGACTTTCTGAAGAGCTTGAAAACTAAAGGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATGCTCCGTACGCCCTCAGCGTTGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTTGAGGATTTCTTAGGAAGCACCAAGAAGCACTACAGAGCAGAGCTGGAGTCTGTGGATTTCCGTGCTGCAGCAGAGACGTCACGCAGCAACATCAACAGCTGGGTGGAGAAACAAACAGAGGGTAAAATTAAGGATCTTCTGG ]
[+] EMBL BU806496 [ GTCCTCCTGAAGACAAGAAGGTCCAAATACTGCAGGAAATATGGCAGCA CCATC TCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTGTTCAGAAAGCTGAGTGATCATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGGTCCTCTACTTC ACTGAGGCAGAGATGCCAAAAGATGCAGAGCAACAACAACAACAGCAGCAACAACAACAAATGAGGCTGCCAGACTTTCTGAAGAGCTTGAAAACGAAAGGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATGCTCCGTACGCCCTCAGCGTTGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTTGAGGATTTCTTAGGAAGCACCAAGAAGCACTACAGAGCAGAGCTGGAGTCTGTGGATTTCCGTGCTGCAGCAGAGACGTCACGCAGCAACATCAACAGCTGGGTGGAGAAACAAACAGAGGGTAAAATTAAGGATCTTCTGG ]
[+] EMBL BU806148 [ TCCTCCTGAAGACAAGAAGGTCCAAATACTGCAGGAAATATGGCAGCA CCATC TCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGGTCCTCTACTTC ACTGAGGCAGAGATGCCAAAAGATGCAGAGCAACAACAACAACAGCAGCAACAACAACAAATGAGGCTGCCAGACTTTCTGAAGAGCTTGAAAACTAAAGGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATGCTCCGTACGCCCTCAGCGTTGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTTGAGGATTTCTTAGGAAGCACCAAGAAGCACTACAGAGCAGAGCTGGAGTCTGTGGATTTCCGTGCTGCAGCAGAGACGTCACGCAGCAACATCAACAGCTGGGTGGAGAAACAAACAGAGGGTAAAATTAAGGATCTTCTGGCAAAGGGGATT ]
[+] EMBL CA845832 [ TCTCTCTGAAGACAAGAAGGTCCAAATACTGCAGGAAATATGGCAGCATCTATC TCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTGTTCAGAACGCTGAGTGATCATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGGTCCTCTACTTC ACTGAGGCAGAGATGCCAAAAGATGCAGAGCAACAACAACAACAGCAGCAACAACAACAAATGAGGCTGCCAGACTTTCTGAAGAGCTTGAAAACGAAAGGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAGCGAGCTCCACAAGGAAAATGCTCCGTACGCCCTCAGCGTTGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTTGAGGATTTCTTAGGAAGCACCAAGAAGCACTACAGAGCAGAGCTGGAGTCTGTGGATTTCCGTGCTGCAGCAGAGACATCACGCAGCAACATCAACAGCTGGGTGGAGAAACAAACAGAGGGTAAAATTAAGGATCTTCTGGCAAAGGGGATTGTGACCGGTGACACCAGGTTGGTGCTGGTCAACGCCATCTACTTCAAAGG ]
[+] EMBL CA846016 [ CCTCCTGAAGACAAGAAGGTCCAAATACTGCAGGAAATATGGCATCA CCATC TCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGGTCCTCTACTTC ACTGAGGCAGAGATGCCAAAAGATGCAGAGCAACAACAACAACAGCAGCAACAACAACAAATGAGGCTGCCAGACTTTCTGAAGAGCTTGAAAACTAAAGGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATGCTCCGTACGCCCTCAGCGTTGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTTGAGGATTTCTTAGGAAGCACCAAGAAGCACTACAGAGCAGAGCTGGAGTCTGTGGATTTCCGTGCTGCAGCAGAGACGTCACGCAGCAACATCAACAGCTGGGTGGAGAAACAAACAGAGGGTAAAATTAAGGATCTTCTGGCAAAGGGGATTGTGACCGGTGACACCAGGTTGGTGCTGGTCAACGCCATCTACTTCAAAGGCAACTGGGACAAGCAGTTCAAGGAAAAAGCCACCAGAGATGCAACATTTCACATCTCCAAGAACTCCTCCAAGCCGGTGAAAATGATGCACCAGTCATCCAAGTTCCCCTT]
[+] EMBL BU807052 [ CTCCTGAAGACAAGAAGGTCCAAATACTGCAGGAAATATGGCAGCA CCATC TCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGGTCCTCTACTTC ACTGAGGCAGAGATGCCAAAAGATGCAGAGCAACAACAACAACAGCAGCAACAACAACAAATGAGGCTGCCAGACTTTCTGAAGAGCTTGAAGACTAAAGGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATGCTCCGTACGCCCTCAGCGTTGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTTGAGGATTTCTTAGGAAGCACCAAGAAGCACTACAGAGCAGAGCTGGAGTCTGTGGATTTCCGTGCTGCAGCAGAGACGTCACGCAGCAACATCAACAGCTGGGTGGAGAAACAAACAGAGGGTAAAATTAAGGATCTTCTGGCAAAGGGGATTGTGACCGGTGACACCAGGTTGG ]
[+] EMBL BU808154 [ AGACAAGAAGGTCCAAATACTGCAGGAAATATGGCAGCA CCATC TCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTGTTCAGAGAGCTGAGTGATAATGACTCCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGGTCCTCTACTTC ACTGAGGCAGAGATGCCAAAAGATGCAGAGCAACAACAACAACAGCAGCAACAACAACAAATGAGGCTGCCAGACTTTCTGAAGAGCTTGAAAACTAAAGGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATGCTCCGTACGCCCTCAGCGTTGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTTGAGGATTTCTTAGGAAGCACCAAGAAGCACTACAGAGCAGAGCTGGAGTCTGTGGATTTCCGTGCTGCAGCAGAGACGTCACGCAGCAACATCAACAGCTGGGTGGAGAAACAAACAGAGGGTAAAATTAAGGATCTTCTGGC ]
[+] EMBL BU806935 [ AGACAAGAAGGTCCAAATACTGCAGGAAATATGGCAGCA CCATC TCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGGTCCTCTACTTC ACTGAGGCAGAGATGCCAAAAGATGCAGAGCAACAACAACAACAGCAGCAACAACAACAAATGAGGCTGCCAGACTTTCTGAAGAGCTTGAAAACTAAAGGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATGCTCCGTACGCCCTCAGCGTTGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTTGAGGATTTCTTAGGAAGCACCAAGAAGCACTACAGAGCAGAGCTGGAGTCTGTGGATTTCCGTGCTGCAGCAGAGACGTCACGCAGCAACATCAACAGCTGGGTGGAGAAACAAACAGAGGGTAAAATTAA ]
[+] EMBL BU805833 [ AGGCAAGAAGGTCCTAATACTGCAGGAAATATGGCAGCA CCATC TCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGGTCCTCTACTTC ACTGAGGCAGAGATGCCAAAAGATGCAGAGCAACAACAACAACAGCAGCAACAACAACAAATGAGGCTGCCAGACTTTCTGAAGAGCTTGAAAACTAAAGGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATGCTCCGTACGCCCTCAGCGTTGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTTGAGGATTTCTTANGAAGCACCAAGAAGCACTACAGAGCAGAGCTGGAGTCTGTGGATTTCCGTGCTGCAGCAGAGACGTCACGCAGCAAC ]
[+] EMBL FR0061376 [ CTGCAGGAAATATGGCAGCA CCATC TCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGGTCTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGNGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGGTCCTCTACTTC ACTGAGGCAGAGATGCCAAAAGATGCAGAGCAACAACAACAACAGCAGCAACAACAACAAATGAGGCTGCCAGACTTTCTGAAGAGCTTGAAAACTAAAGGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATGCTTCGTACGCCCTCA ]
[+] EMBL BU807423 [ GCAGGAAATATGGGAGGA CCATCGTGCTCTCTGCAAGGACAACACCTCCTTCTCCCTGGGTCTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGATATGGTGCTGCTGGGGGACCGAGGCAACACGGGTGCACAGATGTCAGAGGTCCTCGATGGCTTCTGAGGCAGAGATGCCAAAAGATGCAGAGCAACAACAACAACAGCAGCAACAACAACAAATGAGGCTGCCAGACTTTCTGAAGAGCTTGAAAACTAAAGGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATGCTCCGTACGCCCTCAGCGTTGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTTGAGGATTTCTTAGGAAGCACCAAGAAGCACTACAGAGCAGAGCTG ]
[+] EMBL FR0061530 [ GCAGCA CCATC TCCTCTCTGTTAGGCCAACACCTCCTTCTCCCTGGCTGGGATCAGAAAGCTGAGCGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGTTGCACAGATGTCAGAGGTCCTCTACTTC ACTGAGGCAGAGATGCCAAAAGATGCAGAGCAACAACAACAACAGCAGCAACAACAACAAATGAGGCTGCCAGACTTTCTGAAGAGCTTGAAAACTAAAGGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAATATGCTCCGTACGCCCTCA ]
consensusID : consensus_2812#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 625 fasta sequence
[AGGAAAAGTTCTTTTTTTTTTTTTTTAAATTAATTGGATTTTTTGTTATTTATTTATTTTCCTTCTCTTTCTATGTGTATTTTGTATTATACCTCTGGTTAAAAGCTGTGTTTTCGAATGTTATTGTTGCTAAAATATTTAAAAGCAGAAGTATGACAGGTGACGTCACGGAACCGACTCGCCCCTTTGCTCACATACAAGAGTGACATCGCCTTTAAAAGTCTCCCTGTCAAGGTTCAGCAGTCAAACACTCCTCGTCCTCCTGAAGACAAGAAGGTCCAAATACTGCAGGAAATATGGCAGCACCATCTCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGAGCTTGAAAACTAAAGGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATGCTCCGTACGCCCTCAGCGTTGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTTGAGGATTTCTTAGG]
[+] EMBL CA590364 [AGGAAAAGTTCTTTTTTTTTTTTTTTAAATTAATTGGATTTTTTGTTATTTATTTATTTTCCTTCTCTTTCTATGTGTATTTTGTATTATACCTCTGGTTAAAAGCTGTGTTTTCGAATGTTATTGTTGCTAAAATATTTAAAAGCAGAAGTATGACAGGTGACGTCACGGAACCGACTCGCCCCTTTGCTCACATACAAGAGTGACATCGCCTTTAAAAGTCTCCCTGTCAAGGTTCAGCAGTCAAACACTCCTCGTCCTCCTGAAGACAAGAAGGTCCAAATACTGCAGGAAATATGGCAGCACCATCTCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGAGCTTGAAAACTAAAGGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATGCTCCGTACGCCCTCAGCGTTGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTTGAGGATTTCTTAGG]
consensusID : consensus_2812#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 623 fasta sequence
[GGTTCAGTAGCAGAACACTCCTCATCCTCCTGCAGACAAGTACAGGAAATATGGCAGCACCATCTCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGAGCTTGAAAACGA-AAGGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATGCTCCGTACGCCCTCAGCGTTGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTTGAGGATTTCTTAGGAAGCACCAAGAAGCACTACAGAGCAGAGCTGGAGTCTGTGGATTTCCGTGCTGCAGCAGAGACGTCACGCAGCAACATCAACAGCTGGGTGGAGAAACAAACAGAGGGTAAAATTAAGGATCTTCTGGCAAAGGGGATTGTGACCGGTGACACCAGGTTGGTGCTGGTCAACGCCATCTACTTCAAAGGCAACTGGGACAAGCAGTTCAAGGAAAAAGCCACCAGAGATGCAACATTTCACATC]
[+] EMBL BU806315 [GGTTCAGTAGCAGAACACTCCTCATCCTCCTGCAGACAAGTACAGGAAATATGGCAGCACCATCTCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGAGCTTGAAAACGA AATGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATGCTCCGTACGCCCTCAGCGTTGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTTGAGGATTTCTTAGGAAGCACCAAGAAGCACTACAGAGCAGAGCTGGAGTCTGTGGATTTCCGTGCTGCAGCAGAGACGTCACGCAGCAACATCAACAGCTGGGTGGAGAAACAAACAGAGGGTAAAATTAAGGATCTTCTGGCAAAGGGGATTGTGACCGGTGACACCAGGTTGGTGCTGGTCAACGCCATCTACTTCAAAGGCAACTGGAACAAGCAGTTCAAGGAAAAAGCCACCAGAGATGCAACATTTCACATC]
[+] EMBL BU808296 [ CTCATCCTCCTGCAGACAAGTACAGGAAATATGGCAGCACCATCTCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGAGCTTGAAAACTA AAGGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATGCTCCGTACGCCCTCAGCGTTGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTTGAGGATTTCTTAGGAAGCACCAAGAAGCACTACAGAGCAGAGCTGGAGTCTGTGGATTTCCGTGCTGCAGCAGGGACGTCACGCAGCAACATCAACAGCTGGGTGGAGAAACAAACAGAGGGTAAAATTAAGGATCTTCTGGCAAAGGGGATTGTGACCGGTGACACCAGGTTGGTGCTGGTCAACGCCATCTACTTCAAAGGCAACTGGGACAAGCAGTTCAAGGAAAAAGCCACCAGAGATGCAACATTT ]
[+] EMBL BU807177 [ CTCATCCTCCTGCAGACAAGTACAGGAAATATGGCAGCACCATCTCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGAGCTTGAAAACTATAAGGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATGCTCCGTACGCCCTCAGCGTTGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTTGAGGATTTCTTAGGAAGCACCAAGAAGCACTACAGAGCAGAGCTGGAGTCTGTGGATTTCCGTGCTGCAGCAGAGACGTCACGCAGCAACATCAACAGCTGGGTGGAGAAACAAACAGAGGGTAAAATTAAGGATCTTCTGGCAAAGGGGATTGTGACCGGTGACACCAGGTTGGTGCTGGTCAACGCCATCT ]
[+] EMBL BU807114 [ CTCATCTTCCTGAAGACAAGTACAGGAAATATGGCAGCACCATCTCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGAGCTTGAAAATTA TATGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATGCTCCGTACGCCCTCAGCGTTGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTTGAGGATTTCTTAGGAAGCACCAAGAAGCACTACAGAGCAGAGCTGGAGTCTGTGGATTTCCGTGCTGCAGCAGAGACGTCACGCAGCAACATCAACAGCTGGGTGGAGAAACAAACAGAGGGTAAAATTAAGGATCTTCTGGGAAGTGATGATGTGACCGGTGACACCAGGTTGGTGCTG ]
[+] EMBL BU808155 [ TCCTGAAGAC ATTTCACCCCCAATGGCAGCACCATCTCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGAGCTTGAAAACGA AATGGCTTGATGACGACGTCCACGTCAGCTTCAGCCACCTGCTGAACGAGCTCCACAAGGAAAATGCTCCGTACGCCCTCAGCGTTGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTTGAGGATTTCTTAGGAAGCACCAAGAAGCACTACAGAGCAGAGCTGGAGTCTGTGGATTTCCGTGCTGCAGCAGAGACGTCACGCAACAACATCAACAGCTGGGTGGAGAAACAAACAGAGGGTAAAATTAAGGATCTTCTGGGAAGCGATGATGTGACCGGTGACACCAGGTTGGTGCTGGTCAACGCCATCTACTTC ]
[+] EMBL FR0061911 [ AGGAAATATGGCAGCACCATCTCCTCTCTGC GGGCCAACACCTCCTTCTCCCTGGCTCTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGCGCTGCTGGGGGCCCGAGGCAACACGGGTGCACAGATGTCAGAGAGCTTGAAAACGA AAGGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATGCTCCGTACGCCCTCAGCGATGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTTGAGGATTTCTTAGGAAGCACCAAGAAGCACT ]
consensusID : consensus_2812#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 597 fasta sequence
[CTCCTGAAGACAAGAAGGTCCAAATACTGCAGGTGATTTGAAGACATTTACCCGACACGCTAAACTTCAGATTTTGAAATCGATTCTTCTGCGGCTTCGATGTTCCAGAGTCAACAAAGTTTAGTCTGCAGTAGTTCTGCATTTGCCGTGTCGTGTTTTTACTTCATTTAGCAGAACAACTTCTAGTTGAATAGTTTATGTACACGTGAATGATCATATTGTAACACTTTTAGTACGGAAATATGGCAGCACCATCTCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGGTCCTCTACTTCACTGAGGCAGAGATGCCAAAAGATGCAGAGCAACAACAACAACAGCAGCAACAACAACAAATGAGGCTGCCAGACTTTCTGAAGAGCTTGAAAACTAAAGGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATGCTC]
[+] EMBL BU805862 [CTCCTGAAGACAAGAAGGTCCAAATACTGCAGGTGATTTGAAGACATTTACCCGACACGCTAAACTTCAGATTTTGAAATCGATTCTTCTGCGGCTTCGATGTTCCAGAGTCAACAAAGTTTAGTCTGCAGTAGTTCTGCATTTGCCGTGTCGTGTTTTTACTTCATTTAGCAGAACAACTTCTAGTTGAATAGTTTATGTACACGTGAATGATCATATTGTAACACTTTTAGTACGGAAATATGGCAGCACCATCTCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGGTCCTCTACTTCACTGAGGCAGAGATGCCAAAAGATGCAGAGCAACAACAACAACAGCAGCAACAACAACAAATGAGGCTGCCAGACTTTCTGAAGAGCTTGAAAACTAAAGGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATGCTC]
[+] EMBL BU805931 [CTCCTGAAGACAAGAAGGTCCAAATACTGCAGGTGATTTGAAGACATTTACCCGACACGCTAAACTTCAGATTTTGAAATCGATTCTTCTGCGGCTTCGATGTTCCAGAGTCAACAAAGTTTAGTCTGCAGTAGTTCTGCATTTGCCGTGTCGTGTTTTTACTTCATTTAGCAGAACAACTTCTAGTTGAATAGTTTATGTACACGTGAATGATCATATTGTAACACTTTTAGTACGGAAATATGGCAGCACCATCTCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGGTCCTCTACTTCACTGAGGCAGAGATGCCAAAAGATGCAGAGCAACAACAACAACAGCAGCAACAACAACAAATGAGGCTGCCAGACTTTCTGAAGAGCTTGAAAACTAAAGGTCTGGAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATG ]
[+] EMBL FR0061614 [ tAGGCCAACACCGGCTTCTCCCTGGCTCTGTTCAGAACGCCGAGTGATAACGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCAGCTCCTCAGCTCTGGCTATGGCGCTGCTGGGGGCCCAAGGCCACACGGATGCACAGATGAGACAGGCCCTCTACTGCACTGAGGCAGACACGCCAGAAGATGCAGAGCAAC ]
consensusID : consensus_2812#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 493 fasta sequence
[CCCACTTCGAAAGTCGCATCCCTGGGGAAAAAACTAAAGTGACGCCGCGTCTTCCTGACACGGTTCAGTAGCAGAACACTCCTCATCCTCCTGCAGACAAGTACAGGAAATATGGCAGCACCATCTCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTGTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGGTACACCACTCAAACCCTGCAGCTGTGGACAAAACTAGCAGCAGCAATCCAGGTTACCACACAGGGTCAAACCTGGGGCTTTCTTATGCTCAAATGCTAAAGTGACGCCACACCTTAGGACATCTGTGTGCTGCAAATGAAGGCGTTGCAGAGGCAGAGCAGGTCTCTGTGGTGGGTGAGGTGTGACTTCTGGCAGATTCCTGGC]
[+] EMBL CA590417 [CCCACTTCGAAAGTCGCATCCCTGGGGAAAAAACTAAAGTGACGCCGCGTCTTCCTGACACGGTTCAGTAGCAGAACACTCCTCATCCTCCTGCAGACAAGTACAGGAAATATGGCAGCACCATCTCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTGTGTTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATCTCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCAGAGGTACACCACTCAAACCCTGCAGCTGTGGACAAAACTAGCAGCAGCAATCCAGGTTACCACACAGGGTCAAACCTGGGGCTTTCTTATGCTCAAATGCTAAAGTGACGCCACACCTTAGGACATCTGTGTGCTGCAAATGAAGGCGTTGCAGAGGCAGAGCAGGTCTCTGTGGTGGGTGAGGTGTGACTTCTGGCAGATTCCTGGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2812#0 ------------------------------------------------------------
consensus_2812#2 ------------------------------------------------------------
consensus_2812#1 AGGAAAAGTTCTTTTTTTTTTTTTTTAAATTAATTGGATTTTTTGTTATTTATTTATTTT 60
consensus_2812#3 ------------------------------------------------------------
consensus_2812#4 ------------------------------------------------------------
consensus_2812#0 ------------------------------------------------------------
consensus_2812#2 ------------------------------------------------------------
consensus_2812#1 CCTTCTCTTTCTATGTGTATTTTGTATTATACCTCTGGTTAAAAGCTGTGTTTTCGAATG 120
consensus_2812#3 --CTCCTGAAGACAAGAAGGTCCAAATACTGCAGGTGATTTGAAGACATTTACCCGACA- 57
consensus_2812#4 ------------------------------------------------------------
consensus_2812#0 ------------------------------------------------------------
consensus_2812#2 ------------------------------------------------------------
consensus_2812#1 TTATTGTTGCTAAAATATTTAAAAGCAGAAGTATGACAGGT-GACGTCACGGAACCGAC- 178
consensus_2812#3 -CGCTAAACTTCAGATTTTGAAATCGATTCTTCTGCGGCTTCGATGTTCCAGAGTCAACA 116
consensus_2812#4 ----------------------------------------------------------CC 2
consensus_2812#0 ------------------------------------------------------------
consensus_2812#2 -----------------------------------------------------------G 1
consensus_2812#1 ----TCGCCCCTTTGCTCACATACAAGAGTGACATCGCCTTTAAAAGTCTCCCTGTCAAG 234
consensus_2812#3 AAGTTTAGTCTGCAGTAGTTCTGCATTTGCCGTGTCGTGTTTTTACTTCATTTAGCAGAA 176
consensus_2812#4 CACTTCGAAAGTCGCATCCCTGGGGAAAAAACTAAAGTGACGCCGCGTCTTCCTGACACG 62
consensus_2812#0 --------AGTCAAACACTCCTCGTCCTCCTGAA-GACAAGAAGGTCCAAATACT-GCA- 49
consensus_2812#2 -GTTCAGTAGCAGAACACTCCTCATCCTCCTGCA-GACAAG-------------T-ACA- 44
consensus_2812#1 -GTTCAGCAGTCAAACACTCCTCGTCCTCCTGAA-GACAAGAAGGTCCAAATACT-GCA- 290
consensus_2812#3 CAACTTCTAGTTGAATAGTTTATGTACACGTGAATGATCATATTGTAACACTTTTAGTAC 236
consensus_2812#4 -GTTCAGTAGCAGAACACTCCTCATCCTCCTGCA-GACAAG-------------T-ACA- 105
** ** * * * * * ** * ** * * *
consensus_2812#0 GGAAATATGGCAGCACCATCTCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTG 109
consensus_2812#2 GGAAATATGGCAGCACCATCTCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTG 104
consensus_2812#1 GGAAATATGGCAGCACCATCTCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTG 350
consensus_2812#3 GGAAATATGGCAGCACCATCTCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTCTG 296
consensus_2812#4 GGAAATATGGCAGCACCATCTCCTCTCTGCAAGGCCAACACCTCCTTCTCCCTGGCTGTG 165
********************************************************* **
consensus_2812#0 TTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATC 169
consensus_2812#2 TTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATC 164
consensus_2812#1 TTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATC 410
consensus_2812#3 TTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATC 356
consensus_2812#4 TTCAGAAAGCTGAGTGATAATGACACCACTGCAAACATCTTCTACTCTCCCTTCAGCATC 225
************************************************************
consensus_2812#0 TCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCA 229
consensus_2812#2 TCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCA 224
consensus_2812#1 TCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCA 470
consensus_2812#3 TCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCA 416
consensus_2812#4 TCCTCAGCTCTGGCTATGGTGCTGCTGGGGGCCCGAGGCAACACGGCTGCACAGATGTCA 285
************************************************************
consensus_2812#0 GAGGTCCTCTACTTCACTGAGGCAGAGATGCCAAAAGATGCAGAGCAACAACAACAACAG 289
consensus_2812#2 GAG--------------------------------------------------------- 227
consensus_2812#1 GAG--------------------------------------------------------- 473
consensus_2812#3 GAGGTCCTCTACTTCACTGAGGCAGAGATGCCAAAAGATGCAGAGCAACAACAACAACAG 476
consensus_2812#4 GAGGTACACCACTCAAACCCTGCAGCTGTGGACAAAACT----------AGCAGCAGCAA 335
***
consensus_2812#0 CAGCAACAACAACAAATGAGGCTGCCAGACTTTCTGAAGAGCTTGAAAACTAAAGGTCTG 349
consensus_2812#2 ---------------------------------------AGCTTGAAAACGAAAGGTCTG 248
consensus_2812#1 ---------------------------------------AGCTTGAAAACTAAAGGTCTG 494
consensus_2812#3 CAGCAACAACAACAAATGAGGCTGCCAGACTTTCTGAAGAGCTTGAAAACTAAAGGTCTG 536
consensus_2812#4 TCCAGGTTACCACACAGGGTCAAACCTGGGGCTTTCTTATGCTCAAATGCTAAAG----T 391
*** ** * ****
consensus_2812#0 GAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATG-- 407
consensus_2812#2 GAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATG-- 306
consensus_2812#1 GAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATG-- 552
consensus_2812#3 GAGGACGACGTCCACGTCAGCTTCAGCCAGCTGCTGAACGAGCTCCACAAGGAAAATG-- 594
consensus_2812#4 GACGCCACACCTTAGGACATCTGTGTGCTGCAAATGAAGGCGTTGCAGAGGCAGAGCAGG 451
** * * * * ** ** * ** **** * * * ** * * * *
consensus_2812#0 -CTCCGTACGCCCTCAGCGTTGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTT 466
consensus_2812#2 -CTCCGTACGCCCTCAGCGTTGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTT 365
consensus_2812#1 -CTCCGTACGCCCTCAGCGTTGCCAACAGACTGTACGGGGAACAGTCCTACCAGTTTGTT 611
consensus_2812#3 -CTC-------------------------------------------------------- 597
consensus_2812#4 TCTCTGTGGTGGGTGAGGTGTGACTTCTGGCAGATTCCTGGC------------------ 493
***
consensus_2812#0 GAGGATTTCTTAGGAAGCACCAAGAAGCACTACAGAGCAGAGCTGGAGTCTGTGGATTTC 526
consensus_2812#2 GAGGATTTCTTAGGAAGCACCAAGAAGCACTACAGAGCAGAGCTGGAGTCTGTGGATTTC 425
consensus_2812#1 GAGGATTTCTTAGG---------------------------------------------- 625
consensus_2812#3 ------------------------------------------------------------
consensus_2812#4 ------------------------------------------------------------
consensus_2812#0 CGTGCTGCAGCAGAGACGTCACGCAGCAACATCAACAGCTGGGTGGAGAAACAAACAGAG 586
consensus_2812#2 CGTGCTGCAGCAGAGACGTCACGCAGCAACATCAACAGCTGGGTGGAGAAACAAACAGAG 485
consensus_2812#1 ------------------------------------------------------------
consensus_2812#3 ------------------------------------------------------------
consensus_2812#4 ------------------------------------------------------------
consensus_2812#0 GGTAAAATTAAGGATCTTCTGGCAAAGGGGATTGTGACCGGTGACACCAGGTTGGTGCTG 646
consensus_2812#2 GGTAAAATTAAGGATCTTCTGGCAAAGGGGATTGTGACCGGTGACACCAGGTTGGTGCTG 545
consensus_2812#1 ------------------------------------------------------------
consensus_2812#3 ------------------------------------------------------------
consensus_2812#4 ------------------------------------------------------------
consensus_2812#0 GTCAACGCCATCTACTTCAAAGGCAACTGGGACAAGCAGTTCAAGGAAAAAGCCACCAGA 706
consensus_2812#2 GTCAACGCCATCTACTTCAAAGGCAACTGGGACAAGCAGTTCAAGGAAAAAGCCACCAGA 605
consensus_2812#1 ------------------------------------------------------------
consensus_2812#3 ------------------------------------------------------------
consensus_2812#4 ------------------------------------------------------------
consensus_2812#0 GATGCAACATTTCACATCTCCAAGAACTCCTCCAAGCCGGTGAAAATGATGCACCAGTCA 766
consensus_2812#2 GATGCAACATTTCACATC------------------------------------------ 623
consensus_2812#1 ------------------------------------------------------------
consensus_2812#3 ------------------------------------------------------------
consensus_2812#4 ------------------------------------------------------------
consensus_2812#0 TCCAAGTTCCCCTT 780
consensus_2812#2 --------------
consensus_2812#1 --------------
consensus_2812#3 --------------
consensus_2812#4 --------------
|
|||||||
| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |