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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2820#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 387 fasta sequence
[GCACGAGAAGACCTGAACGTCCTCACGAAAG--AAAAAAACAGACATTCGCTCAACAACAATGGACCCCTGTGACTGCTCAAAAACTGGAAGCTGCAGCTGCGGAGCATCCTGCGCTTGCAAAAACTGCTCCTGCACCACCTGCAAGAAGAGTTGCTGTGAATGCTGCCCATCCGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGGAAGACGTGCGACACCAGCTGCTGTCAGTGAGGAGTCTGCAGCGTCAACCGTCTACTGACTTTTGAATCAATGCCTACATGA--CTC-TTTTGTACTTGTCAAATGTTGAATAAAAGTTCTAATTAACC---------AA-AAAAAAAAAAAAAACCCCGGGGGGGGGCCGGGTACCAAGTTTTGGGCCC]
[+] EMBL CA330620 [GCACGAGAAGACCTGAACGTCCTCACGAAAGA AAAAAAAAAGACATTCGCTCAACAACAATGGACCCCTGTGACTGCTCAAAAACTGGAAGCTGCAGCTGCGGAGCATCCTGCGCTTGCAAAAACTGCTCCTGCACCACCTGCAAGAAGAGTTGCTGTGAATGCTGCCCATCCGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGAAAGACGTGCGACACCAGCTGCTGTCAGTGAGGAGTCTGCTGCGTCAACCGTCTACTGACTTTTGAATCAATGCCTACATGA CTC TTTTGTACTTGTCAAATGTTGAATAAAAGTTCTAATTAA ]
[-] EMBL CA588708 [ GAACGTCCTCACGAAAG AAAAAAACAGACATTCGCTCAACAACAATGGACCCCTGTGACTGCTCAAAAACTGGAAGCTGCAGCTGCGGAGCATCCTGCGCTTGCAAAAACTGCTCCTGCACCACCTGCAAGAAGAGTTGCTGTGAATGCTGCCCATCCGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGGAAGACGTGCGACACCAGCTGCTGTCAGTGAGGAGTCTGCAGCGTCAGCCGTCTACTGACTTTTGAATCAATGCCTA ]
[+] EMBL CA846386 [ TCCTCACGAAAG AAAAAAACAGACATTCGCTCAACAACAATGGACCCCTGTGACTGCTCAAAAACTGGAAGCTGCAGCTGCGGAGCATCCTGCGCTTGCAAAAACTGCTCCTGCACCACCTGCAAGAAGAGTTGCTGTGAATGCTGCCCATCCGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGGAAGACGTGCGACACCAGCTGCTGTCAGTGAGGAGTCTGCAGCGTCAACCGTCTACTGACTTTTGAATCAATGCCTACATGACTCTC TTTTGTACTTGTCAAATGTTGAATAAAAGTTCT ]
[+] EMBL CA846442 [ TCCTCACGAAAG AAAAAAACAGACATTCGCTCAACAACAATGGACCCCTGTGACTGCTCAAAAACTGGAAGCTGCAGCTGCGGAGCATCCTGCGCTTGCAAAAACTGCTCCTGCACCACCTGCAAGAAGAGTTGCTGTGAATGCTGCCCATCCGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGGAAGACGTGCGACACCAGCTGCTGTCAGTGAGGAGTCTGCAGCGTCAACCGTCTACTGACTTTTGAATCAATGCCTACATGACTCTC TTTTGTACTTGTCAAATGTTGAATAAAAGTTCT ]
[+] EMBL CA844598 [ aTCCTCACGAAAGAAAAAAAAAAAGACATTCGCTCAAC CCTATGGACCCCTGTGACTGCTCAAAAACTGGAAGCTGCAGCTGCGGAGCATCCTGCGCTTGCAAAAACTGCTCCTGCACCACCTGCAAGAAGAGTTGCTGTGAATGCTGCCCATCCGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGAAAGACGTGCGACACCAGCTGCTGTCAGTGAGGAGTCTGCTGCGTCAACCGTCTACTGACTTTTGAATCAATGCCTACATGA CTC TTTTGTACTTGTCAAATGTTGAATAAAAGT ]
[+] EMBL CA846378 [ CCTCACGAAAGA AAAAAAAAAGACATTCGCTCAACAACAATGGACCCCTGTGACTGCTCAAAAACTGGAAGCTGCAGCTGCGGAGCATCCTGCGCTTGCAAAAACTGCTCCTGCACCACCTGCAAGAAGAGTTGCTGTGAATGCTGCCCATCCGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGAAAGACGTGCGACACCAGCTGCTGTCAGTGAGGAGTCTGCTGCGTCAACCGTCTACTGACTTTTGAATCAATGCCTACATGA CTC TTTTGTACTTGTCAAATGTTGAATAAAAGTTCTAAT ]
[+] EMBL CA341086 [ CCTCACGAAAG AAAAAAACAGACATTCGCTCAACAACAATGGACCCCTGTGACTGCTCAAAAACTGGAAGCTGCAGCTGCGGAGCATCCTGCGCTTGCAAAAACTGCTCCTGCACCACCTGCAAGAAGAGTTGCTGTGAATGCTGCCCATCCGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGGAAGACGTGCGACACCAGCTGCTGTCAGTGAGGAGTCTGCAGCGTCAACCGTCTACTGACTTTTGAATCAATGCCTACATGACTCTC TTTTGTACTTGTCAAATGTTGAATAAAAGTTCTAATTA ]
[+] EMBL CA846564 [ CTCACGAAAGA AAAAAAAAAGACATTCGCTCAACAACACTTTACCCCTGTGACTGCTCAAAAACTGGAAGCTGCAGCTGCGGAGCATCCTGCGCTTGCAAAAACTGCTCCTGCTTCACCTGCAAGAAGAGTTGCTGTGAATGCTGCCCATCCGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGAAAGACGTGCGACACCAGCTGCTGTCAGTGAGGAGTCTGCTGCGTCAACCGTCTACTGACTTTTGAATCAATGCCTACATGA CTC TTTTGTACTTGTCAAATGTTGA ]
[+] EMBL CA844705 [ ACGAAAG AAAAAAACAGACATTCGCTCAACAACAATGGACCCTTGTGACTGCTCAAAAACTGGAAGCTGCAGCTGCGGAGCATCCTGCGCTTGCAAAAACTGCTCCTGCACCACCTGCAAGAAGAGTTGCTGTGAATGCTGCCCATCCGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGGAAGACGTGCGACACCAGCTGCTGTCAGTGAGGAGTCTGCAGCGTCAACCGTCTACTGACTTTTGAATCAATGCCTACATGACTCTC TTTTGTACTTGTCAAATGTTGAATAAAAGTTCT ]
[+] EMBL CA844601 [ GAAAG AAAAAAACAGACATTCGCTCAACAACAATGGACCCCTGTGACTGCTCAAAAACTGGAAGCTGCAGCTGCGGAGCATCCTGCGCTTGCAAAAACTGCTCCTGCACCACCTGCAAGAAGAGTTGCTGTGAATGCTGCCCATCCGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGGAAGACGTGCGACACCAGCTGCTGTCAGTGAGGAGTCTGCAGCGTCAACCGTCTACTGACTTTTGAATCAATGCCTACATGACTCTC TTTTGTACTTGTCAAATGTTGAATAAAAGTTCTA ]
[+] EMBL FR0057550 [ AAG AAAAAAACAGACATTCGCTCAACAACAATGGACCCCTGTGACTGCTCAAAAACTGGAAGCTGCAGCTGCGGAGCATCCTGCGCTTGCAAAAACTGCTCCTGCACCACCTGCAAGAAGAGTTGCTGTGAATGCTGCCCATCCGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGGAAGACGTGCGACACCAGCTGCTGTCAGTGAGGAGTCTGCAGCGTCAACCGTCTATTGACTTTTGAATCAATGCCTACATGA CTCTTTTTGTACTTGTCAAATGTTGAATAAAAGTTCTAATTAACA TA GAACAATAAAAAACTCCCGAGGGGGGGCCGGGAACCAAGTTTTGGCC ]
[+] EMBL CA846561 [ AAAAACAGACATTCGCTCAACAACAATGGACCCCTGTGACTGCTCAAAAACTGGAAGCTGCAGCTGCGGAGCATCCTGCGCTTGCAAAAACTGCTCCTGCACCACCTGCAAGAAGAGTTGCTGTGAATGCTGCCCATCCGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGGAAGACGTGCGACACCAGCTGCTGTCAGTGAGGAGTCTGCAGCGTCAACCGTCTACTGACTTTTGAATCAATGCCTACATGACTCTC TTTTGTACTTGTCAAATGTTGAATAAAAGTTCTAATT ]
[+] EMBL CA330271 [ AAAACAGACATTCGCTCAACAACAATGGACCCCTGTGACTGCTCAAAAACTGGAAGCTGCAGCTGCGGAGCATCCTGCGCTTGCAAAAACTGCTCCTGCACCACCTGCAAGAAGAGTTGCTGTGAATGCTGCCCATCCGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGGAAGACGTGCGACACCAGCTGCTGTCAGTGAGGAGTCTGCAGCGTCAACCGTCTACTGACTTTTGAATCAATGCCTACATGACTCTC TTTTGTACTTGTCAAATGTTGAATAAAAGTTCT ]
[+] EMBL FR0057155 [ AAAAAGACATTCGCTCAACAACAATGGACCCCTGTGACTGCTCAAAAACTGGAAGCTGCAGCTGCGGAGCATCCTGCGCTTGCAAAAACTGCTCCTGCACCACCTGCAAGAAGAGTTGCTGTGAATGCTGCCCATCCGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGAAAGACGTGCGACACCAGCTGCTGTCAGTGAGGAGTCTGCTGCGTCAACCGTCTACTGACTTTTGAATCAATGCCTACATGA CTC TTTTGTACTTGTCAAATGTTGAATAAAAGTTCTAATTAACC AAGAGAGATAAAAAAACCCCCGGGGGGGGGCCGGGTCCCAATTTTTGGGC ]
[+] EMBL CA847265 [ ATTCGCTCAACAACAATGGACCCCTGTGACTGCTCAAAAACTGGAAGCTGCAGCTGCGGAGCATCCTGCGCTTGCAAAAACTGCTCCTGCACCACCTGCAAGAAGAGTTGCTGTGAATGCTGCCCATCCGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGAAAGACGTGCGACACCAGCTGCTGTCAGTGAGGAGTCTGCTGCGTCAACCGTCTACTGACTTTTGAATCAATGCCTACATGA CTC TTTTGTACTTGTCAAATGTTGAATAAAAGTTCTA ]
[+] EMBL CA847290 [ ATTCGCTCAACAACAATGGACCCCTGTGACTGCTCAAAAACTGGAAGCTGCAGCTGCGGAGCATCCTGCGCTTGCAAAAACTGCTCCTGCACCACCTGCAAGAAGAGTTGCTGTGAATGCTGCCCATCCGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGAAAGACGTGCGACACCAGCTGCTGTCAGTGAGGAGTCTGCTGCGTCAACCGTCTACTGACTTTTGAATCAATGCCTACATGA CTC TTTTGTACTTGTCAAATGTTGAATAAAAGTTCTAATTAA ]
[+] EMBL FR0057019 [ TGCTCAAAAACTGGAAGCTGCAGCTGCGGAGCATCCTGCGCTTGCAAAAACTGCTCCTGCACCACCTGCAAGAAGAGTTGCTGTGAATGCTGCCCATCCGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGAAAGACGTGCGACACCAGCTGCTGTCAGTGAGGAGTCTGCTGCGTCAACCGTCTATTGACTTTTGAATCAATGCCTACATGA CTC TTTTGTACTTGTCAAATGTTGAATAAAAGTTCTAATTAACC AA AANAAAAAAAAAAAACCCCGAGGGGGG ]
[+] EMBL CA844698 [ GCTCAAAAACTGGAAGCTGCAGCTGCGGAGCATCCTGCGCTTGCAAAAACTGCTCCTGCACCACCTGCAAGAAGAGTTGCTGTGAATGCTGCCCATCCGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGGGCAAGGGAAAGACc ]
[+] EMBL FR0057385 [ AAAAACTGGAAGCTGCAGCTGCGGAGCATCCTGCGCTTGCAAAAACTGCTCCTGCACCACCTGCAAGAAGAGTTGCTGTGAATGCTGCCCATCCGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGGAAGACGTGCGACACCAGCTGCTGTCAGTGAGGAGTCTGCAGCGTCAACCGTCTACTGACTTTTGAATCAATGCCTACATGACTCTC TTTTGTACTTGTCAAATGTTGAATAAAAGTTCTAATTAACCACAAAANAAAA AAAAAAAAAAAAAACCCCCGGGGGGGGCCCGGTACCCAATTTTTGGCCC]
[+] EMBL FR0057391 [ AAAAACTGGAAGCTGCAGCTGCGGAGCATCCTGCGCTTGCAAAAACTGCTCCTGCACCACCTGCAAGAAGAGTTGCTGTGAATGCTGCCCATCCGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGGAAGACGTGCGACACCAGCTGCTGTCAGTGAGGAGTCTGCAGCGTCAACCGTCTACTGACTTTTGAATCAATGCCTACATGACTCTC TTTTGTACTTGTCAAATGTTGAATAAAAGTTCTAATTAACC AA AAGAAGAAAAAAAACCTCGGGGGGGG ]
[+] EMBL CA330107 [ GCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGAAAGACGTGCGACACCAGCTGCTGTCAGTGAGGAGTCTGCTGCGTCAACCGTCTATTGACTTTTGAATCAATGCCTACATGA CTCTTTTTGTACTTGTCAAATGTTGAATAAAAGTTCTAAT ]
consensusID : consensus_2820#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 297 fasta sequence
[TACAGAACAACAATGGACCCTTGTGACTGCTCAAAGACTGGAAGCTGCAACTGCGGAGGATCCTGCGCTTGCAAAAACTGTTCCTGCACCACCTGCAAGAAGAGCTGCTGCTCATGCTGCCCATCTGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGGAAGACATGTGACACCAGCTGCTGCCAGTGAGGAGTCTGCAGCATCAATCATGCACTGACCTTGTGATGTGTCCTCTCATTTTCAAATGTTTGTAAAAATCTAATTTTACTGTTGAAATAAACACCTTTCCAC]
[+] EMBL CA844779 [TACAGAACAACAATGGACCCTTGTGACTGCTCAAAGACTGGAAGCTGCAACTGCGGAGGATCCTGCGCTTGCAAAAACTGTTCCTGCACCACCTGCAAGAAGAGCTGCTGCTCATGCTGCCCATCTGGCTGCAGCAAGTGCGCCTCTGGCTGCGTGTGCAAGGGGAAGACATGTGACACCAGCTGCTGCCAGTGAGGAGTCTGCAGCATCAATCATGCACTGACCTTGTGATGTGTCCTCTCATTTTCAAATGTTTGTAAAAATCTAATTTTACTGTTGAAATAAACACCTTTCC ]
[+] EMBL CA844487 [ GCGCCTCTGGCTGCGTGTGCAAGGGGAAGACATGTGACACCAGCTGCTGCCAGTGAGGAGTCTGCAGCATCAATCATGCACTGACCTTGTGATGTGTCCTCTCATTTTCAAATGTTTGTAAAAATCTAATTTTACTGTTGAAATAAACACCTTTCCAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2820#0 GCACGAGAAGACCTGAACGTCCTCACGAAAGAAAAAAACAGACATTCGCTCAACAACAAT 60
consensus_2820#1 ----------------------------------------------TACAGAACAACAAT 14
* *********
consensus_2820#0 GGACCCCTGTGACTGCTCAAAAACTGGAAGCTGCAGCTGCGGAGCATCCTGCGCTTGCAA 120
consensus_2820#1 GGACCCTTGTGACTGCTCAAAGACTGGAAGCTGCAACTGCGGAGGATCCTGCGCTTGCAA 74
****** ************** ************* ******** ***************
consensus_2820#0 AAACTGCTCCTGCACCACCTGCAAGAAGAGTTGCTGTGAATGCTGCCCATCCGGCTGCAG 180
consensus_2820#1 AAACTGTTCCTGCACCACCTGCAAGAAGAGCTGCTGCTCATGCTGCCCATCTGGCTGCAG 134
****** *********************** ***** ************ ********
consensus_2820#0 CAAGTGCGCCTCTGGCTGCGTGTGCAAGGGGAAGACGTGCGACACCAGCTGCTGTCAGTG 240
consensus_2820#1 CAAGTGCGCCTCTGGCTGCGTGTGCAAGGGGAAGACATGTGACACCAGCTGCTGCCAGTG 194
************************************ ** ************** *****
consensus_2820#0 AGGAGTCTGCAGCGTCAACCGTCTACTGACTTTTGAATCAATGCCTACATGACTCTTTTG 300
consensus_2820#1 AGGAGTCTGCAGCATCAATCATGCACTGACCTTGTGATGTGTCCTCTCAT---------- 244
************* **** * * ****** ** ** * * ***
consensus_2820#0 TACTTGTCAAATGTTGAATAAAAGTTCTAATTAACCAAAAAAAAAAAAAAAACCCCGGGG 360
consensus_2820#1 ----TTTCAAATGTTTG-TAAAAATCTAATTTTACTGTTGAAATAAACACCTTTCCAC-- 297
* ********* ***** * * ** ** *** *** * **
consensus_2820#0 GGGGGCCGGGTACCAAGTTTTGGGCCC 387
consensus_2820#1 ---------------------------
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |