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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2840#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 779 fasta sequence
[TAGCATTTGTAGCCTTAAACCAGCCTACATACACTTTTTAATCCTAATTACTAACTCAACTATTACTCACATCATTACATTATGTTGATTAGAGTTTACTTTTTTATTTGATTCATAACTCAGTTAAGTCAGTCATATAGTGCTCACAAAATGTAACTTCAAACCTCGTGCCGAATTCGGCACGAGGGAAGAAGGCCAAGGTGGATGAGTTCCCCCTGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGCCGCTCGTATCTGTGCCAACAAGTATATGGTGAAGACCTGTGGCAAAGACGGCTTCCACATCCGCATGCGTCTGCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGCGCTGGAGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGGCACGTGTACACATCGGTCAGGTGATCATGTCCGTGCGCACCAAGACCCAGAACAAGGAGCATGTGGTGGAGGCTCTGCGCAGAGCCAAGTTCAAGTTCCCCGGGCGTCAGAAGATTCACATCTCTAAGAAGTACGGCTTCACAAAGTTCAACGCCTGCGACTTTGATGACATGATGGCCGACAAGCGTCTGATCCCAGATGGCTGTGGGGTCAAGTACATCCCCAACAAGGGTCCGCTGTCCCGCTGGAGGGCGCTCCACGCCAACTAGGGCCGCCGAAGGCTGCGAGCAGACTTGAATAAATCTGGATTTCATTATAAAACAAAA]
[+] EMBL CA846937 [TAGCATTTGTAGCCTTAAACCAGCCTACATACACTTTTTAATCCTAATTACTAACTCAACTATTACTCACATCATTACATTATGTTGATTAGAGTTTACTTTTTTATTTGATTCATAACTCAGTTAAGTCAGTCATATAGTGCTCACAAAATGTAACTTCAAACCTCGTGCCGAATTCGGCACGAGGGAAGAAGGCCAAGGTGGATGAGTTCCCCCTGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGCCGCTCGTATCTGTGCCAACAAGTATATGGTGAAGACCTGTGGCAAAGACGGCTTCCACATCCGCATGCGTCTGCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGCGCTGGAGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGGCACGTGTACACATCGGTCAGGTGATCATGTCCGTGCGCACCAAGACCCAGAACAAGGAGCATGTGGTGGAGGCTCTGCGCAGAGCCAAGTTCAAGTTCCCCGGGCGTCAGAAGATTCACATCTCTAAGAAGTACGGCTTCACAAAGTTCAACGCCTGCGACTTT ]
[+] EMBL FR0055803 [ GTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGCCGCTCGTATCTGTGCCAACAAGTATATGGTGAAGACCTGTGGCAAAGACGGCTTCCACATCCGCATGCGTCTGCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGCGCTGGAGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGGCACGTGTACACATCGGTCAGGTGATCATGTCCGTGCGCACCAAGACCCAGAACAAGGAGCATGTGGTGGAGGCTCTGCGCAGAGCCAAGTTCAAGTTCCCCGGGCGTCAGAAGATTCACATCTCTAAGAAGTACGGCTTCACAAAGTTCAACGCCTGCGACTTTGATGACATGATGGCCGACAAGCGTCTGATCCCAGATGGCTGTGGGGTCAAGTACATCCCCAACAATGGTCCGCTGTCCCGCTGGAGGGCGCTCCACGCCAA ]
[+] EMBL FR0056044 [ AACAAGGAGCATGTGGTGGAGGCTCTGCGCAGAGCCAAGTTCAAGTTCCCCGGGCGTCAGAAGATTCACATCTCTAAGAAGTACGGCTTCACAAAGTTCAACGCCTGCGACTTTGATGACATGATGGCCGACAAGCGTCTGATCCCAGATGGCTGTGGGGTCAAGTACATCCCCAACAAGGGTCCGCTGTCCCGCTGGAGGGCGCTCCACGCCAACTAGGGCCGCCGAAGGCTGCGAGCAGACTTGAATAAATCTGGATTTCATTATAAAACAAAA]
[+] EMBL CA847168 [ AGATGGCTGTGGGGTCAAGTACATCCCCAACAAGGGTCCGCTGTCCCGCTGGAGGGCGCTCCACGCCAACTAGGGCCGCCGAAGGCTGCGAGCAGACTTGAATAAATCTGGATTTCATTATA ]
[+] EMBL CA844721 [ ATGGGTGTGGGGTCAAGTACATCCCCAACAAGGGTCCGCTGTCCCGCTGGAGGGCGCTCCACGCCAACTAGGCCCGCCGAAGGCTGCGAGCAGACTTGAATAAATCTGGATTTCATTAT ]
consensusID : consensus_2840#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 651 fasta sequence
[CGCTGTTACCGTTACTGCAAGAACAAGCCCTACCCCAAGTCTCGCTTCTGCAGGGGTGTTCCTGCTGGGAGGTGCTGAGATCATTAAGGGACCACTGAGACAAACACAGGTGGAGACTTGCTGGTGAAACAGTGACAATTCTGCACAGCTTTTCAATCTCTGCCTCAATTTATTTTCAAGATCCTAAAATCAGGATCTTTGACTTGGGAAGGAAGAAGGCCAAGGTGGATGAGTTCCCCCTGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGCCGCTCGTATCTGTGCCAACAAGTATATGGTGAAGACCTGTGGCAAAGACGGCTTCCACATCCGCATGCGTCTGCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGCGCTGGAGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGGCACGTGTACACATCGGTCAGGTGATCATGTNCGTGCGCACCAAGACCCAAGACAGGGAGCATGTGGTGGAGGCTCTGCGCAGAGCCAAGTTCAAGTTTCCCGGGCGTCAGAAGATTCACATCTCTAAGAAGTACGGCTTCACAAAGTTCAACGCCTGCGACTTTGATGACATGA]
[+] EMBL FR0057781 [CGCTGTTACCGTTACTGCAAGAACAAGCCCTACCCCAAGTCTCGCTTCTGCAGGGGTGTTCCTGCTGGGAGGTGCTGAGATCATTAAGGGACCACTGAGACAAACACAGGTGGAGACTTGCTGGTGAAACAGTGACAATTCTGCACAGCTTTTCAATCTCTGCCTCAATTTATTTTCAAGATCCTAAAATCAGGATCTTTGACTTGGGAAGGAAGAAGGCCAAGGTGGATGAGTTCCCCCTGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGCCGCTCGTATCTGTGCCAACAAGTATATGGTGAAGACCTGTGGCAAAGACGGCTTCCACATCCGCATGCGTCTGCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGCGCTGGAGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGGCACGTGTACACATCGGTCAGGTGATCATGTNCGTGCGCACCAAGAC ]
[+] EMBL FR0057736 [ CCTACCCCAAGTCTCGCTTCTGCAGGGGTGTTCCTGCTGGGAGGTGCTGAGATCATTAAGGGACCACTGAGACAAACACAGGTGGAGACTTGCTGGTGAAACAGTGACAATTCTGCACAGCTTTTCAATCTCTGCCTCAATTTATTTTCAAGATCCTAAAATCAGGATCTTTGACTTGGGAAGGAAGAAGGCCAAGGTGGATGAGTTCCCCCTGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGCCGCTCGTATCTGTGCCAACAAGTATATGGGGAAGACCTGTGGCAAAGACCGCTTCCACATCCGCATGCGTCTGCACCCCTTCCACGTCAACCGCATCAACAAG ]
[+] EMBL FR0055326 [ agTCCTGATCCTAAAATCAGGATCTTTGACTTGGGAAGGAAGAAGGCCAAGGTGGATGAGTTCCCCCTGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGACGCTCGTATCTGTGCCAACAAGTATATGGTGAAGACCTGTGGCAAAGACGGCTTCCACATCCGCATGCGTCTGCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGCGCTGGAGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGGCACGTGTACACATCGGTCAGGTGATCATGTCCGTGCGCACCAAGACCCAAGACAGGGAGCATGTGGTGGAGGCTCTGCGCAGAGCCAAGTTCAAGTTTCCCGGGCGTCAGAAGATTCACATCTCTAAGAAGTACGGCTTCACAAAGTTCAACGCCTGCGACTTTGATGACATGA]
consensusID : consensus_2840#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 640 fasta sequence
[TTGCAACCATGGGCCGTCGACCAGCCCGCTGTTACCGTTACTGCAAGAACAAGCCCTACCCCAAGTCTCGCTTCTGCAGGGGTGTTCCTGATCCTAAAATCAGGATCTTTGACTTGGGAAGGAAGAAGGCCAAGGTGGATGAGTTCCCCCTGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGCCGCTCGTATCTGTGCCAACAAGTATATGGTGAAGACCTGTGGCAAAGACGGCTTCCACATCCGCATGCGTCTGCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGCGCTGGAGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGGCACGTGTACACATCGGTCAGGTGATCATGTCCGTGCGCACCAAGACCCAGAACAAGGAGCATGTGGTG-GAGGCTCT-GCGCAGAGCCAAGTTCAAGTTC-CCCGGGCGTCAGAAGATTCA-CATCTCTAAGAAGTACGGCTTCACAAAGTTCAACGCCTGCGACTTTGATGACATGATGGCCGACAAGCGTCTGATCCCAGATGGCTGTGGGGTCAAGTACATCCCCAACAAGGGTCCGCTGTCCCGCTGGAGGGC]
[+] EMBL CA591266 [TTGCAACCATGGGCCGTCGACCAGCCCGCTGTTACCGTTACTGCAAGAACAAGCCCTACCCCAAGTCTCGCTTCTGCAGGGGTGTTCCTGATCCTAAAATCAGGATCTTTGACTTGGGAAGGAAGAAGGCCAAGGTGGATGAGTTCCCCCTGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGCCGCTCGTATCTGTGCCAACAAGTATATGGTGAAGACCTGTGGCAAAGACGGCTTCCACATCCGCATGCGTCTGCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGCGCTGGAGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGGCACGTGTACACATCGGTCAGGTGATCATGTCCGTGCGCACCAAGACCCAGAACAAGGAGCATGTGGTG GAGGCT ]
[+] EMBL CA591185 [TTGCAACCATGGGCCGTCGACCAGCCCGCTGTTACCGTTACTGCAAGAACAAGCCCTACCCCAAGTCTCGCTTCTGCAGGGGTGTTCCTGATCCTAAAATCAGGATCTTTGACTTGGGAAGGAAGAAGGCCAAGGTGGATGAGTTCCCCCTGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGCCGCTCGTATCTGTGCCAACAAGTATATGGTGAAGACCTGTGGCAAAGACGGCTTCCACATCCGCATGCGTCTGCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGCGCTGGAGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGGCACGTGTACACATCGGTCAGGTGATCATGTCCGTGCGCACCAAGACCCAGAACAAGGAGCATGTGGTG GAGGCTCT GCGCA ]
[+] EMBL FR0055614 [ TGGGCCGTCGACCAGACCGCTGCTACCGTTACTGCAAGAACAAGCCCTACCCCAAGTCTCGCTTCTGCAGGGGTGTTCCTGATCCTAAAATCAGGATCTTTGACTTGCGAAGGAAGAAGGCCAAGGTGGATGAGTTCCCCCTGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGACGCTCGTATCTGTGCCAACAAGTATATGGCGACGACCTGTGGGAAAGACGGATTCCACATCCGCATGCGTCTGCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGCGCTGGAGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGCGAAGCCTCAGGGCACCGTGGTACGTGTACACATCGGTCAGGTGATCATGTCCGTGCGCACCACGACCCAag ]
[+] EMBL FR0057831 [ GTCGACCAGCCCGCTGTTACCGTTACTGCAAGAACAAGCCCTACCCCAAGTCTCGCTTCTGCAGGGGTGTTCCTGATCCTAAAATCAGGATCTTTGACTTGGGAAGGAAGAAGGCCAAGGTGGATGAGTTCCCCCTGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGCCGCTCGTATCTGTGCCAACAAGTATATGGTGAAGACCTGTGGCAAAGACGGTTTCCACATCCGCATGCGTCTGCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGCGCTGGAGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGGCACGTGTACACATCGGTCAGGTGATCATGTCCGTGCGCACCAAGACCCAGAACATGGAGCATGTGGTG GAGGCTCT GCGCAGAGCCAAGTTCAAGTTC CCCGGGCGTCAGA ]
[+] EMBL CA845687 [ GGTACCGTTACTGCAAGAACAAGCCCTACCCCAAGTCTTTCATCTGCAGGGGTGTTCCTGATCCTAAAATCAGGATCTTTGACTTGGGAAGGAAGAAGGCCAAGGTGGATGAGTTCCCCCTGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGCCGCTCGTATCTGTGCCAACAAGTATATGGTGAAGACCTGTGGCAAAGACGGCTTCCACATCCGCATGCGTCTGCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGCGCTGGAGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGGCACGTGTACACATCGGTCAGGTGATCATGTCCGTGCGCACCAAGACCCAAAACAAGGAGCATGTGGTG GAGGCTCT GCGCAGAGCCAAGTTCAAGTTC CCCGGGCGTCAGAAGATTCA CATCTCTAAGAAATACGGCTTCACAAAGTTCAACGCCTGCGACTTTGATGACATGATGGCCGACAAGCGTCTGATCCCAGATGGCTGTGGGGTCAAGTACATCCCCAACAAGGGTCCGCTGTCCCGCTGG ]
[+] EMBL CA844922 [ CGTTACTGCAAGAACAAGCCCTACCCCAAGTCTCGCTTCTGCAGGGGTGTTCCTGATCCTAAAATCAGGATCTTTGACTTGGGAAGGAAGAAGGCCAAGGTGGATGAGTTCCCCCTGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGCCGCTCGTATCTGTGCCAACAAGTATATGGTGAAGACCTGTGGCAAAGACGGCTTCCACATCCGCATGCGTCTGCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGCGCTGGAGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGGCACGTGTACACATCGGTCAGGTGATCATGTCCGTGCGCACCAAGACCCAGAACAAGGAGCATGTGGTG GAGGCTCT GCGCAGAGCCAAGTTCAAGTTC CCCGGGCGTCAGAAGATTCA CATCTCTAAGAAGTACGGCTTCACAAAGTTCAACGCCTGCGACTTTGATGACATGATGGCCGACAAGCGTCTGATCCCAGATGGCTGTGGGGTCAAGTACATCCCCAACAAGGGTCCGCTGTCCCGCTGGAGGGC]
[+] EMBL CA845307 [ CGTTACTGCAAGAACAAGCCCTACCCCAAGTCTCGCTTCTGCAGGGGTGTTCCTGATCCTAAAATCAGGATCTTTGACTTGGGAAGGAAGAAGGCCAAGGTGGATGAGTTCCCCCTGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGCCGCTCGTATCTGTGCCAACAAGTATATGGTGAAGACCTGTGGCAAAGACGGCTTCCACATCCGCATGCGTCTGCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGCGCTGGAGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGGCACGTGTACACATCGGTCAGGTGATCATGTCCGTGCGCACCAAGACCCAGAACAAGGAGCATGTGGTG GAGGCTCT GCGCAGAGCCAAGTTCAAGTTC CCCGGGCGTCAGAAGATTCA CATCTCTAAGAAGTACGGCTTCACAAAGTTCAACGCCTGCGACTTTGATGACATGATGGCCGACAAGCGTCTGATCCCAGATGGCTGTGGNGTCAAGTACATCCCCAACAAGGGTCCGCTGTCCCGCTGG ]
[+] EMBL FR0055678 [ GTTACTGCAAGAACAAGCCCTACCCCAAGTCTCGCTTCTGCAGGGGTGTTCCTGATCCTAAAATCAGGATCTTTGACTTGGGAAGGAAGAAGGCCAAGGTGGATGAGTTCCCCCTGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGCCGCTCGTATCTGTGCCAACAAGTATATGGTGAAGACCTGTGGCAAAGACGGCTTCCACATCCGCATGCGTCTGCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGCGCTGGAGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGGCACGTGTACACATCGGTCAGGTGATCATGTCCGTGCGCACCAAGACCCAGGACAAGGAGCATGTGGTG GAGGCTCT GCGCAGAGCCAAGTTCAAGGTC CCCGGGCGTCAGAAGATTCA CATCTCTAAGAAGTACGGCTTCACAAAGTTCAACGCCTGCGACTTTGATGACATGATGGCCGACAAGCGTCTGATCCCAGATGGCTGTGG ]
[+] EMBL CA845310 [ AGAACACTCCCTACCCCAAGTCTCACTTGTGCATGGGTGCTCCTGATCCTAAAATCAAGACCTTTGACTTGTGAAGGAATAAGGCCAAGGCGGATGAGTTCCCCCTGTGTGGTCACATGGTCTCTGATGAGTATGAACAGCTGTCTTCACAAACTCTGGAGGCCGATCGTATCTGTGCCAACAACTTTATTTTGTAGACCTGTGGCAAAGACGGCTTCCACATCCGCATGTGTCTGCACCCCTTCCACGTCATCCGTATCAACAAGATGTTGTCCTGCGCTGGAGCCGACAGGCTCCACACTGAGATGCGTGGGGCTTTTGGGAAGTCTCAGGGCACCGAGGCACGTGTACACATCGGTCAGGTGATCATGTCCGTGCGCACCAAGACCCAGAAACAGGAGCATGTGGTG GAGGCTCT GCCCAAAGCCAAGTTCCAGTTC CCCGGGCGTCAGAAGACTTA CATCTCTAACAAGTACGGCTTCACCAAGTTCAACGCCTGCCCCTTTGATGACATG ]
[+] EMBL FR0055329 [ CCCTACCCCAAGTCTCGCTTCTGCAGGGGTGTTCCTGATCCTAAAATCAGGATCTTTGACTTGGGAAGGAAGAAGGCCAAGGTGGATGAGTTCCCCCTGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGACGCTCGTATCTGTGCCAACAAGTATATGGTGAAGACCTGTGGCAAAGACGGCTTCCACATCCGCATGCGTCTGCACCCCTTCCACGTCATCCGCATCAACATGATGTTGTCCTGCGCTGGAGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGGCACGTGTACACATCGGTCAGGTGATCATGTCCGTGCGCACCAAGACCCAGCACAAGGAGCATGTGGTG GAGGC ]
[+] EMBL FR0056146 [ CCTACCCCAAGTCTCGCTTCTGCAGGGGTGTTCCTGATCCTAAAATCAGGATCTTTGACTTGGGAAGGAAGAAGGCCAAGGTGGATGAGTTCCCCCTGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGCCGCTCGTATCTGTGCCAACAAGTATATGGTGAAGACCTGTGGCAAAGACGGCTTCCACATCCGCATGCGTCTGCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGCGCTGGAGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGGCACGTGTACACATCGGTCAGGTGATCATGTCCGTGCGCACCAAGACCCAGAACAAGGAGCATGTGGTG GAGGCTCT GCGCAGAGCCAAGTTCAAGTTC CCCGGGCGTCAGAAGATTCA CATCTCTAAGAAGTACGGCTTCACAAAGTTCAACGCCTGCGACTTTGATGACATGATGGCCGACAAGCGTCTGATCTCA ]
[+] EMBL FR0058411 [ GCAGGGGTGGTCCTGATCCTAAAATCAGGATCTTTGACTTGGGAAGAAAGAAGGCCAAGGTGGATGAGTTCCCCCTGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGCCGCTCGTATCTGTGCCAACAAGTATATGGTGAAGACCTGTGGCAAAGACGGCTTCCACATCCGCATGCGTCTGCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGCGCTGGAGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGGCACGTGTACACATCGGGCAGGTGATCATGTCCGTGCGCACCAAGACCCAGAACAAGG ]
[+] EMBL FR0055908 [ AGGTGGATGAGTTCCCCCTGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGCCGCTCGTATCTGTGCCAACAAGTATATGGTGAAGACCTGTGGCAAAGACGGCTTCCACATCCGCATGCGTCTGCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGCGCTGGAGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGGCACGTGTACACATCGGTCAGGTGGACATGTCCGTGCGCACCAGGACCCAGAACAAGGAGCATGTGGTG GAGGCTCTGGCGCAGAGCCAAGTTCAGGTTC CCCGGGCGTCAGAAGga ]
[-] EMBL CA329619 [ CGCATCAACAAGATGTTTTCCTGCGCTGGAGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAACCCTCAGGGCACCGTGGCACGTGTACACATCGGCCAGGTGATCATGTCCGTGCGCACCAAGACCCAGAACAAGGAGCATGTGGTG GAGGCTCT GCGCAGAGCCACGAACAAGTTC CCCGGGCGTCAGAAGATTCG CATCTCTAAGAAGTACGGCTTCACAAAGTTCAACGCCTGCGACTTTGATGACATGATGGCCGACAAGCGTCTGATCCCAGATGGCTGTGGGGTCAAGTACATCCCCAACAAGGGTCCGCTGTCCCGCTG ]
[+] EMBL FR0055947 [ CGCATCAACAAGATGTTGTCCTGCGCTGGAGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCAGCGTGGCACGTGTACACATCGGTCAGGTGATCATGTCCGTGCGCACTAAGACCCAGCCCAAGGAGCATGTGGTGCGCGGCTCT GCGCAGAGCCAAGTTCAAGTTCGTCCGGGCGTCAGAAGATTCATCATCTCTGACAACTGGGGCTTCACAGGGTTCAGCGCCTGCGA ]
[+] EMBL FR0056494 [ TGTCCTGCGCTGGAGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGGCACGTGTACACATCGGTCAGGTGATCATGTCCGTGCGCACCAAGACCCAGAACAAGGAGCATGTGGTG GAGGCTCT GCGCAGAGGCAAGTTCAGGTTC CCCGGGCGTCAGAAGATTCA CATCTCTAAGAAGTACGGGTTCACAAAGTTCAGCGCCTGCGACTTTGATGACATGATG ]
consensusID : consensus_2840#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 628 fasta sequence
[TTGTCCTGCGCTGGAGCCGACAGGTGAGTCACCTGTGGATTCAGCCTCCGTCATCGGCCGCGTTTGAGCCTCTCCTGTCTGTCACGCTGCTCACCTGAACTTCTGCACCTCAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGGCACGTGTACACATCGGTCAGGTGATCATGTCCGTGCGCACCAAGACCCAGAACAAGGAGCATGTGGTGGAGGCTCTGCGCAGAGCCAAGTTCAAGTTCCCCGGGCGTCAGAAGGTGAGTGAGAGGTCACCTGTACAGAGGAAGCTGGTTCTGGTGTGTGAAGGCTGCAGACCGTCACTGGTCCTGTGTCCTGAGCCCAGAGGCGGCCCCTGAAGTGCCCCTCGGGCTGAAACGTGATGGACTCACGTTGATTCCTTGTCGTGCAGATTCACATCTCTAAGAAGTACGGCTTCACAAAGTTCAACGCCTGCGACTTTGATGACATGATGGCCGACAAGCGTCTGATCCCAGATGGCTGTGGGGTCAAGTACATCCCCAACAAGGGTCCGCTGTCCCGCTGTAGGGCGCTCCACGCCAACTAGGGCCGCCGAAGGCTGCGAGCAGACTTGAATAAATCTGGATTTCA]
[-] EMBL CA333046 [TTGTCCTGCGCTGGAGCCGACAGGTGAGTCACCTGTGGATTCAGCCTCCGTCATCGGCCGCGTTTGAGCCTCTCCTGTCTGTCACGCTGCTCACCTGAACTTCTGCACCTCAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGGCACGTGTACACATCGGTCAGGTGATCATGTCCGTGCGCACCAAGACCCAGAACAAGGAGCATGTGGTGGAGGCTCTGCGCAGAGCCAAGTTCAAGTTCCCCGGGCGTCAGAAGGTGAGTGAGAGGTCACCTGTACAGAGGAAGCTGGTTCTGGTGTGTGAAGGCTGCAGACCGTCACTGGTCCTGTGTCCTGAGCCCAGAGGCGGCCCCTGAAGTGCCCCTCGGGCTGAAACGTGATGGACTCACGTTGATTCCTTGTCGTGCAGATTCACATCTCTAAGAAGTACGGCTTCACAAAGTTCAACGCCTGCGACTTTGATGACATGATGGCCGACAAGCGTCTGATCCCAGATGGCTGTGGGGTCAAGTACATCCCCAACAAGGGTCCGCTGTCCCGCTGTAGGGCGCTCCACGCCAACTAGGGCCGCCGAAGGCTGCGAGCAGACTTGAATAAATCTGGATTTCA]
consensusID : consensus_2840#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 613 fasta sequence
[GATGACTCGGATGCTTTTTCCACAGTTACCGTTACTGCAAGAACAAGCCCTACCCCAAGTCTCGCTTCTGCAGGGGTGTTCCTGATCCTAAAATCAGGATCTTTGACTTGGGAAGGAAGAAGGCCAAGGTGGATGAGTTCCCCCTGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGGTGAGTCGCTGTGACCTTTGTTCCCTGGGGAGACGCAGGCAAGCGTGTTGGGGTGGCGACAAATCAGAATTAATCTGATGGAATCATTTATTCAGAAGTGACTGATCTTCATCCACAGACAGTGTAAATTCATCCATCAAAGGTTCTGATGTTGCTCCAGCTGCTCTTGTTCCCATGGAGGCCTGGAGCTGTTGGATATTTGAAGTTTTTTGTTTTATTTTCTGAGAAGCTGATGTTCCACTTAGCAAAAGGGTACATTTCCTGTCCCGAGGCTCCCGTGTGGGACGGCTGACCTCTTTGGCCCACCTTGGAACTGGTCTGGTGGAAACGCTGGCGAGTTCAGAGACTTCACGGTTCTCCTACTGGGGCTCCGTAGCAGAGATGAATGTTGATGTTCCGAGCTCCATCCACACCGAGACAC]
[+] EMBL BU807496 [GATGACTCGGATGCTTTTTCCACAGTTACCGTTACTGCAAGAACAAGCCCTACCCCAAGTCTCGCTTCTGCAGGGGTGTTCCTGATCCTAAAATCAGGATCTTTGACTTGGGAAGGAAGAAGGCCAAGGTGGATGAGTTCCCCCTGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGGTGAGTCGCTGTGACCTTTGTTCCCTGGGGAGACGCAGGCAAGCGTGTTGGGGTGGCGACAAATCAGAATTAATCTGATGGAATCATTTATTCAGAAGTGACTGATCTTCATCCACAGACAGTGTAAATTCATCCATCAAAGGTTCTGATGTTGCTCCAGCTGCTCTTGTTCCCATGGAGGCCTGGAGCTGTTGGATATTTGAAGTTTTTTGTTTTATTTTCTGAGAAGCTGATGTTCCACTTAGCAAAAGGGTACATTTCCTGTCCCGAGGCTCCCGTGTGGGACGGCTGACCTCTTTGGCCCACCTTGGAACTGGTCTGGTGGAAACGCTGGCGAGTTCAGAGACTTCACGGTTCTCCTACTGGGGCTCCGTAGCAGAGATGAATGTTGATGTTCCGAGCTCCATCCACACCGAGACAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2840#0 ---------TAGCATTTGTAGCCTTAAACCAGCCTACATACACTTTTTAATCCTAATTAC 51
consensus_2840#3 ------------------------------------------------------------
consensus_2840#2 ------------------------------------------------------------
consensus_2840#1 CGCTGTTACCGTTACTGCAAGAACAAGCCCTACCCCAAGTCTCGCTTCTGCAGGGGTGTT 60
consensus_2840#4 ------------------------------------------------------------
consensus_2840#0 TAACTCAACTATTACTCACATCATTACATTATGTTGATTAGAGTTTACTTTTTTATTTGA 111
consensus_2840#3 ------------------------------------------------------------
consensus_2840#2 ------------------------TTGCAACCATGGGCCGTCGACCAGCCCGCTGTTACC 36
consensus_2840#1 CCTGCTGGGAGGTGCTGAGATCATTAAGGGACCACTGAGACAAACACAGGTGGAGACTTG 120
consensus_2840#4 -----------------------------GATGACTCGGAT-GCTTTTTCCACAGTTACC 30
consensus_2840#0 TTCATAACTCAGTTAAGTCAGTCATATAGTGCT----CACAA----AATGTAACTTCAA- 162
consensus_2840#3 -TTGTCCTGCGCTGGAGCCGACAGGTGAGTCAC----CTGTG----GATTCAGCCTCCG- 50
consensus_2840#2 GTTACTGCAAGAACAAGCCCTACCCCAAGTCTCGCTTCTGCA----GGGGTGTTCCTGA- 91
consensus_2840#1 CTGGTGAAACAGTGACAATTCTGCACAGCTTTTCAATCTCTGCCTCAATTTATTTTCAAG 180
consensus_2840#4 GTTACTGCAAGAACAAGCCCTACCCCAAGTCTCGCTTCTGCA----GGGGTGTTCCTGA- 85
* * *
consensus_2840#0 -ACCTCGTGCCGAA---TTCGGC--ACGAGGGAAGAAGGCCAAGGTGGATGAGTTCCCCC 216
consensus_2840#3 -TCATCG-GCCGCG---TTTGA---GCCTCTCCTGTCTGTCACGCTGC-TCACCTGAACT 101
consensus_2840#2 -TCCTAAAATCAGGATCTTTGACTTGGGAAGGAAGAAGGCCAAGGTGGATGAGTTCCCCC 150
consensus_2840#1 ATCCTAAAATCAGGATCTTTGACTTGGGAAGGAAGAAGGCCAAGGTGGATGAGTTCCCCC 240
consensus_2840#4 -TCCTAAAATCAGGATCTTTGACTTGGGAAGGAAGAAGGCCAAGGTGGATGAGTTCCCCC 144
* * * ** * * * ** * ** * * * *
consensus_2840#0 TGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGCCG 276
consensus_2840#3 TCTGCA-CCTCA-GGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACC 159
consensus_2840#2 TGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGCCG 210
consensus_2840#1 TGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGCTCTGGAGGCCG 300
consensus_2840#4 TGTGTGGTCACATGGTCTCTGATGAGTATGAGCAGCTGTCTTCAGAAGGT----GAGTCG 200
* ** * ** ** * ** * *** * * * ** **** *
consensus_2840#0 CTCGTATCTGTGC-CAACAAGTATATGGTGA-AGACCTGTGGCAAAGACGGCTTCCACAT 334
consensus_2840#3 GTGGCACGTGTACACATCGGTCAGGTGATCA-TG-TCCGTGCGCACCAAGAC--CCAGAA 215
consensus_2840#2 CTCGTATCTGTGC-CAACAAGTATATGGTGA-AGACCTGTGGCAAAGACGGCTTCCACAT 268
consensus_2840#1 CTCGTATCTGTGC-CAACAAGTATATGGTGA-AGACCTGTGGCAAAGACGGCTTCCACAT 358
consensus_2840#4 CTGTGACCTTTGTTCCCTGGGGAGACGCAGGCAAGCGTGTTGGGGTGGCGAC----AAAT 256
* * * * * * * ** * * * *
consensus_2840#0 CCGCATGCGTCTGCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGCGCTGG 394
consensus_2840#3 CAAGGAGCATGTGG------TGGAGGCTCTGCGCAGAGCCAAGTTCAAGTTCCCCG--GG 267
consensus_2840#2 CCGCATGCGTCTGCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGCGCTGG 328
consensus_2840#1 CCGCATGCGTCTGCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGCGCTGG 418
consensus_2840#4 CAGAATTAATCTGA--TGGAATCATTTATTCAGAAGTGACTGATCTTCATCCACAGACAG 314
* * ** * * * * * * * * *
consensus_2840#0 AGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGG- 453
consensus_2840#3 CGTCAGAAGGT----GAGTGAGAGGTCACCTGTACAGAGGAAGC-TGGTTCTGGTGTGT- 321
consensus_2840#2 AGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGG- 387
consensus_2840#1 AGCCGACAGGCTCCAGACTGGGATGCGTGGGGCTTTTGGGAAGCCTCAGGGCACCGTGG- 477
consensus_2840#4 TGTAAATTCATCC---ATCAAAGGTTCTGATGTTGCTCCAGCTGCTCTTGTTCCCATGGA 371
* * * * **
consensus_2840#0 CACGTGTACACATCGGTCAGGTGA--TCATGT-CCGTGCGCACCAAGACCCAGAACAAGG 510
consensus_2840#3 GAAGGCTGCAGACCG-TCAC-TGG--TCCTGTGTCCTGAGCCCAGAGGCGGCCCCTGAAG 377
consensus_2840#2 CACGTGTACACATCGGTCAGGTGA--TCATGT-CCGTGCGCACCAAGACCCAGAACAAGG 444
consensus_2840#1 CACGTGTACACATCGGTCAGGTGA--TCATGT-NCGTGCGCACCAAGACCCAAGACAGGG 534
consensus_2840#4 GGCCTGGAGCTGTTGGATATTTGAAGTTTTTTGTTTTATTTTCTGAGAAGCTG---ATGT 428
* * ** * * * * * **
consensus_2840#0 AGCATGTGGTGGAGGCTCTGCGCAGAGCCAAGTTCAAGTTCCCCGGGCGTCAGAAGATTC 570
consensus_2840#3 TGCCCCTCGGGCTGAAACGTGATGGACTCACGTT---GATTCCTTGTCGT--GCAGATTC 432
consensus_2840#2 AGCATGTGGTGGAGGCTCTGCGCAGAGCCAAGTTCAAGTTCCCCGGGCGTCAGAAGATTC 504
consensus_2840#1 AGCATGTGGTGGAGGCTCTGCGCAGAGCCAAGTTCAAGTTTCCCGGGCGTCAGAAGATTC 594
consensus_2840#4 TCCACTTAGCAAAAG---GGTACATTTCCTGTCCCGAGGCTCCCGTGTG--GGACGGCTG 483
* * * * * ** * * * *
consensus_2840#0 ACATCTCTAAGAAG---TACGGCTTCACAAAGTTCAACGCCTGCGACTTTGATGACATGA 627
consensus_2840#3 ACATCTCTAAGAAG---TACGGCTTCACAAAGTTCAACGCCTGCGACTTTGATGACATGA 489
consensus_2840#2 ACATCTCTAAGAAG---TACGGCTTCACAAAGTTCAACGCCTGCGACTTTGATGACATGA 561
consensus_2840#1 ACATCTCTAAGAAG---TACGGCTTCACAAAGTTCAACGCCTGCGACTTTGATGACATGA 651
consensus_2840#4 ACCTCTTTGGCCCACCTTGGAACTGGTCTGGTGGAAACGCTGGCGAGTTCAGAGACTTCA 543
** *** * * ** * ***** **** ** *** * *
consensus_2840#0 TGGCCGACAAGCGTCTGATCCCAGATGGCTGTGGGGTCAAGTACATCCCCAACAAGGGTC 687
consensus_2840#3 TGGCCGACAAGCGTCTGATCCCAGATGGCTGTGGGGTCAAGTACATCCCCAACAAGGGTC 549
consensus_2840#2 TGGCCGACAAGCGTCTGATCCCAGATGGCTGTGGGGTCAAGTACATCCCCAACAAGGGTC 621
consensus_2840#1 ------------------------------------------------------------
consensus_2840#4 CGGTTCTCCTACTGGGGCTCCGTAGCAGAGATGAATGTTGATGT-TCCGAGCTCCATCCA 602
consensus_2840#0 CGCTGTCCCGCTGGAGGGCGCTCCACGCCAACTAGGGCCGCCGAAGGCTGCGAGCAGACT 747
consensus_2840#3 CGCTGTCCCGCTGTAGGGCGCTCCACGCCAACTAGGGCCGCCGAAGGCTGCGAGCAGACT 609
consensus_2840#2 CGCTGTCCCGCTGGAGGGC----------------------------------------- 640
consensus_2840#1 ------------------------------------------------------------
consensus_2840#4 CACCGAGACAC------------------------------------------------- 613
consensus_2840#0 TGAATAAATCTGGATTTCATTATAAAACAAAA 779
consensus_2840#3 TGAATAAATCTGGATTTCA------------- 628
consensus_2840#2 --------------------------------
consensus_2840#1 --------------------------------
consensus_2840#4 --------------------------------
|
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |