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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2847#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 948 fasta sequence
[CGAATTCGGCACCAGGACACCACGAGAATGCTGGCTCTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTG-AAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT-GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC-TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCCGGCAGCCCCCTGGTGTGTTTTGGAGAAGTCCAAGGACTGGTGTCGTGGGGGCAGGGATGTGCCCTTCCCGAGTATCCTGGAGTCTACGTTAAAGTCTGTGAATTCCTCTACTGGATTGAAGACGTCCTACAGACCTACTCCTAAAGAAATCACCCAGTCTTCCATCCTCTCTCTGTGGTTTGGTTTTTCTCTGGCAACTTTTTCAAGTTTCCACCTCATAAAAACACAGAATGGCAAATCAAAACAGGCCATTTGATCTCTCTTCATTTTGCCGTCCTTCATCTTAATAACAGGTGATGATAAAGCAACAGATACTTTCAA]
[+] EMBL CA330958 [CGAATTCGGCACCAGGACACCATGAGACTGCTGGCTCTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCGAGGTG AAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGGTGGNACAACCCCTACGNCATGGANGNCATGCTGCGAGAACACGACGTGCGTGTGTTTGAGGCCACCGAGCAGCTCATGAAAACTGGACCCATCATCTGGCATCCCGACTACCACTACCACACTCTGCACCATGGAATCCTGCTGATAAAGCTTCTCCACCCACTGCAGGTGACAGAGCCCGCGGCACCCATCTCTCTGCCCACACGGTGGTCCCTACCGGGGCATGCCCTGCTCTGCGTCTGCCTGCCG CACACCCCCACCACTGGCCACGCCCTCATGCCCACACCTC TGCCGCGC ]
[+] EMBL FR0057834 [ ACGAGCAAGCTGGCTCTGCCGCTGATGGTTGGAGATGCTGCGGCAGTTCCACGTGTAAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGGATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTACTGGCGACGCCATCATGCCCAAACGTC TGCAGTGC ]
[+] EMBL CA333647 [ TGCTGGCTCTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTG AAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGGCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCCGGCAGCCCCCTG ]
[+] EMBL CA330081 [ TGCTGGCTCTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTG AAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCC ]
[+] EMBL CA330177 [ CTGGCTCTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTG AAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCC ]
[+] EMBL CA330884 [ TCTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTG AAGATGGAAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGA ]
[+] EMBL CA333562 [ TCTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTG AAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCCGGCAGCCCCCTG ]
[+] EMBL CA333672 [ TCTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTG AAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCCGGCAGCCCCCTG ]
[+] EMBL CA330106 [ GCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTG AAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCCGGC ]
[+] EMBL CA330054 [ GCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTG AAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGATTTCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAAGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGA ]
[+] EMBL FR0057862 [ CAGATGGTTGGAGCTGCTGCGGCAGTTCCACGTG AAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGGGACGCCATCATGCCCA ]
[+] EMBL CA330988 [ TTGGAGCTGCTGCGGCAGTTCCACGTG AAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTCCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCCGGCAGCCCCCTGGTG ]
[+] EMBL FR0057908 [ TTGGAGCTGCTGCGGCAGTTCCACGTG AAGATGGCGGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTCTTGCAGTGCTTGGACGTNCC GCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCC GCATGATC ]
[+] EMBL CA330955 [ TACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCCGGCAGCCCCCTGGTGTGTTTTGGAGAAGTCCAAGGACTGGTGTCGTGGGGGCAGGGATGTGCCCTTCCCGAGTATCCTGGAGTCTACGTTAAAGTCTGTGAATTCCTCTACTGGATTGAAGACGTCCTACAGACCTACTCCTAAAGAAATCACCCAGT ]
[+] EMBL CA330894 [ TCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCCGGCAGCCCCCTGGTGTGTTTTGGAGAAGTCCAAGGACTGGTGTCGTGGGGGCAGGGATGTGCCCTTCCCGAGTATCCTGGAGTCTACGTTAAAGTCTGTGAATTCCTCTACTGGATTGAAGACGTCCTACAGACCTACTCCTAAAGAAATCACCCAGTCTTCCATCCTCTCTCTGTGGTTTGGTTTTTCTCTGGCAACTTTTTCAAGTTTCCACCTCATAAAAACACAGAATGGCAAATCAAAACAGGCCATTTGATCT ]
[+] EMBL FR0057867 [ CAGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCGCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCCGGTAGCCCCCTGGTGTGTTTTGGAGAAGTCCAAGGACTGGTGTCGTGGGGGCAGGGATGTGCCCTTCCCGAGTATCCTGGAGTCTACGTTAAAGTCTGTGAATTCCTCTACTGTATTGACTACGTCCTACAGACCTACTCCGAAGGAAATCACCCAGTCTTCC ]
[+] EMBL CA333545 [ AGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCCGGCAGCCCCCTGGTGTGTTTTGGAGAAGTCCAAGGACTGGTGTCGTGGGGGCAGGGATGTGCCCTTCCCGAGTATCCTGGAGTCTACGTTAAAGTCTGTGAATTCCTCTACTGGATTGAAGACGTCCTACAGACCTACTCCTAAAGAAATCACCCAGTCTTCCATCCTCTCTCTGTGGTTTGGTTTTTCTCTGGCAACTTTTTCAAGTTTCCACCTCATAAAAACACAGAATGGCAAATCAAAACAGGCCATTTGATCTCTCTTCATTTTGCCGTCCTTCATCTTAATAACAGGTGA ]
[-] EMBL CA588749 [ GGACTGGTGTCGTGGGGGCAGGGATGTGCCCTTCCCGAGTATCCTGGAGTCTACGTTAAAGTCTGTGAATTCCTCTACTGGATTGAAGACGTCCTACAGACCTACTCCTAAAGAAATCACCCAGTCTTCCATCCTCTCTCTGTGGTTTGGTTTTTCTCTGGCAACTTTTTCAAGTTTCCACCTCATAAAAACACAGAATGGCAAATCAAAACAGGCCATTTGATCTCTCTTCATTTT ]
[+] EMBL CA333666 [ ATGTGCCCTTCCCGAGTATCCTGGAGTCTACGTTAAAGTCTGTGAATTCCTCTACTGGATTGAAGACGTCCTACAGACCTACTCCTAAAGAAATCACCCAGTCTTCCATCCTCTCTCTGTGGTTTGGTTTTTCTCTGGCAACTTTTTCAAGTTTCCACCTCATAAAAACACAGAATGGCAAATCAAAACAGGCCATTTGATCTCTCTTCATTTTGCCGTCCTTCATCTTAATAACAGGTGATGATAAAGCAACAGATACTTTCAA]
[+] EMBL CA330075 [ AGACGTCCTACAGACCTACTCCTAAAGAAATCACCCAGTCTTCCATCCTCTCTCTGTGGTTTGGTTTTTCTCTGGCAACTTTTTCAAGTTTCCACCTCATAAAAACACAGAATGGCAAATCAAAACAGGCCATTTGATCTCTCTTCATTTTGCCGTCCTTCATCTTAATAACAGGTGATGATAAAGCAACAGATACTTTCA ]
[+] EMBL CA330077 [ ATTTTGCCGTCCTTCATCTTAATAACAGGTGATGATAAAGCAACAGATACTTTCA ]
consensusID : consensus_2847#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 571 fasta sequence
[CTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTGAAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGTGTCCCTACGGNGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACA-CCGCCAGTAGTGGCGACGTCAACACTGACTGACCTGCGCTACCACGCTACCATGAAAACGGACCCTGTAAAGAATGTGGCCGCCTCTCTTGCAGCCATCATGCCCAACCGTCTGCAGTGCTTGGACGTCCCGGCAGTGAGTAAC]
[+] EMBL CA333554 [CTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTGAAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGTGTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACA CCGCCAGTAGTGGCGACGTCAACACTGACTGACCTGCGCTACCACGCTACCATGAAAACGGACCCTGTAAAGAATGTGGCCGCCTCTCTTGCAGCCATCATGCCCAACCGTCTGCAGTGCTTGGACGTCCCGGCAGTGAGTAAC]
[+] EMBL FR0057940 [ TGCTGCGGCAGTTCCACGTGAAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGTGTCCCTACGGNGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCCGCCAGTAGTGG ]
[+] EMBL FR0057945 [ GCGGCAGTTCCACGTGAAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGTGTCCCTACGGNGGCATGCCCTGCTCTGTGTCTGGGCTGGGTAACA CCGCCAGTAGTGGCG ]
[+] EMBL FR0057947 [ GCGGCAGTTCCACGTGAAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGTGTCCCTACGG ]
consensusID : consensus_2847#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 409 fasta sequence
[GCACGAGATGAGACTGCTGGCTCTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTGAAGATGGCAGGATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGGCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGGAGGTCATGAAAACTGACACCATCATCTGGCATCCCGAGTGAGCAGAAATATTCCAATTCCTGTGTTTGCATTATTTTACAAATAACAGATTTATTGACTCGGTAGTGCAAAAGTAGCGAATGTGTGATTAAAAGCTTTTACTG]
[+] EMBL CA330918 [GCACGAGATGAGACTGCTGGCTCTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTGAAGATGGCTAGATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGGCATGCAGGTCATGCTGGGAGAACACCACGTGCGTGTGTTTGAGGGCACCCAGGACGTCATGAAA ]
[+] EMBL CA330055 [ GAGACTGCTGGCTCTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTGAAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGAGTGAGCAGAAATATTCCAATTCCTGTGTTTGCATTATTTTACAAATAACAGATTTATTGACTCGGTAGTGCAAAAGTAGCGAATGTGTGATTAAAAGCTTTTACTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2847#0 CGAATTCGGCACCAGGACACCACGAGAATGCTGGCTCTGCTGCTGATGGTTGGAGCTGCT 60
consensus_2847#1 ------------------------------------CTGCTGCTGATGGTTGGAGCTGCT 24
consensus_2847#2 --------------GCACGAGATGAGACTGCTGGCTCTGCTGCTGATGGTTGGAGCTGCT 46
************************
consensus_2847#0 GCGGCAGTTCCACGTGAAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCT 120
consensus_2847#1 GCGGCAGTTCCACGTGAAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCT 84
consensus_2847#2 GCGGCAGTTCCACGTGAAGATGGCAGGATCATTGGCGGACAGGAGTGCGAGCCTCACTCT 106
************************** *********************************
consensus_2847#0 CGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAAC 180
consensus_2847#1 CGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAAC 144
consensus_2847#2 CGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAAC 166
************************************************************
consensus_2847#0 AAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATG 240
consensus_2847#1 AAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATG 204
consensus_2847#2 AAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGGCATGCAGGTCATG 226
********************************************** *************
consensus_2847#0 CTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACC 300
consensus_2847#1 CTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACC 264
consensus_2847#2 CTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGGAGGTCATGAAAACTGACACC 286
*************************************** ** *****************
consensus_2847#0 ATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAG 360
consensus_2847#1 ATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAG 324
consensus_2847#2 ATCATCTGGCATCCCGAGTGAG-CAGAAATATTCCAATTCCTGTGTTTGCATTA------ 339
***************** * * * * * ** * ** * *
consensus_2847#0 CTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGTGT 420
consensus_2847#1 CTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGTGT 384
consensus_2847#2 -TTTTACAAATAACAGAT-TTATTGACTCGGTAGTGCAAAAGTAGC--------GAATGT 389
**** ** * ** * * ** ** ** * * * * * * ***
consensus_2847#0 CCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGAC 480
consensus_2847#1 CCCTACGGNGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGAC 444
consensus_2847#2 GTGATTAAAAGCTTTTACTG---------------------------------------- 409
** * ***
consensus_2847#0 GCCATCATGCCCAACCGTCTGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGT 540
consensus_2847#1 GTCA--ACACTGACTGACCTGCGCTACCACGCTACCATGAAAACGGACCCTGTAAAGAAT 502
consensus_2847#2 ------------------------------------------------------------
consensus_2847#0 GAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGA 600
consensus_2847#1 GTGGCCGCCTCTCTTGCAGCCATCATGCCCA--ACCGTCTGCAGTGCTTGGACG--TCCC 558
consensus_2847#2 ------------------------------------------------------------
consensus_2847#0 GGCAGAGACGCTTGTAACGGAGACTCCGGCAGCCCCCTGGTGTGTTTTGGAGAAGTCCAA 660
consensus_2847#1 GGCAGTGA-----GTAAC------------------------------------------ 571
consensus_2847#2 ------------------------------------------------------------
consensus_2847#0 GGACTGGTGTCGTGGGGGCAGGGATGTGCCCTTCCCGAGTATCCTGGAGTCTACGTTAAA 720
consensus_2847#1 ------------------------------------------------------------
consensus_2847#2 ------------------------------------------------------------
consensus_2847#0 GTCTGTGAATTCCTCTACTGGATTGAAGACGTCCTACAGACCTACTCCTAAAGAAATCAC 780
consensus_2847#1 ------------------------------------------------------------
consensus_2847#2 ------------------------------------------------------------
consensus_2847#0 CCAGTCTTCCATCCTCTCTCTGTGGTTTGGTTTTTCTCTGGCAACTTTTTCAAGTTTCCA 840
consensus_2847#1 ------------------------------------------------------------
consensus_2847#2 ------------------------------------------------------------
consensus_2847#0 CCTCATAAAAACACAGAATGGCAAATCAAAACAGGCCATTTGATCTCTCTTCATTTTGCC 900
consensus_2847#1 ------------------------------------------------------------
consensus_2847#2 ------------------------------------------------------------
consensus_2847#0 GTCCTTCATCTTAATAACAGGTGATGATAAAGCAACAGATACTTTCAA 948
consensus_2847#1 ------------------------------------------------
consensus_2847#2 ------------------------------------------------
|
|||||||
| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |