These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2873#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 797 fasta sequence [TCTGTCGGGGCCGCGGCTGCACGACGAGAACATGGCTGTGATGAAATGAGCTGCGGCGTCCACGTCCCCATCGTCTCCTTGATATTCGGAAAAGTAGAGTCTCAGGTGTCTCCCGGAGTGACGGATCTTCTCCTGGAAAAGGTCGGTTTTGTTCATGAGCAGAATCACTGAGGTCCTCCTGAAGATGCCGTTGGCGCAGGTGGAGGCAAAAAGTTCTAAACTCTCCTGGAGTCGATTCACTGGGGAAGCCTCCATTAGCGTCGTGTCGTAGCTGCTGAGAGCCGCGACAAACCAGACGGCCTGAATGCCTTCGAAGCATTTCAGCCACTTCCTCCTCTCTCGTGCCGAATTCGGCACGGGCACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG--TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAAAA----GGAAAAAAAAAAACCCCGGGGGGGGCCCCGGT] [-] EMBL CA846482 [TCTGTCGGGGCCGCGGCTGCACGACGAGAACATGGCTGTGATGAAATGAGCTGCGGCGTCCACGTCCCCATCGTCTCCTTGATATTCGGAAAAGTAGAGTCTCAGGTGTCTCCCGGAGTGACGGATCTTCTCCTGGAAAAGGTCGGTTTTGTTCATGAGCAGAATCACTGAGGTCCTCCTGAAGATGCCGTTGGCGCAGGTGGAGGCAAAAAGTTCTAAACTCTCCTGGAGTCGATTCACTGGGGAAGCCTCCATTAGCGTCGTGTCGTAGCTGCTGAGAGCCGCGACAAACCAGACGGCCTGAATGCCTTCGAAGCATTTCAGCCACTTCCTCCTCTCTCGTGCCGAATTCGGCACGAGCACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAAAA a ] [+] EMBL FR0057193 [ GCCACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAAAA NAAAAAAAAAAAA ] [+] EMBL CA844732 [ TTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCC TCCTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATTCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAAAA AAA ] [+] EMBL CA844663 [ TCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTCGTACTAAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAAA ] [+] EMBL CA846387 [ GGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAAAA CTAAAA ] [+] EMBL CA844758 [ GGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTCCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAAA ] [+] EMBL CA844608 [ GGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCATCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTC ] [+] EMBL CA341074 [ AGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACTCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAA ] [+] EMBL CA341106 [ AGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAA ] [+] EMBL FR0057144 [ GCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAGTAGAACGTTGTGAAAGTT AAAA GGAGAACGGAAAACTC ] [+] EMBL CA844480 [ TCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTC ] [+] EMBL CA844451 [ TTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGTGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAGTCTCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCC ] [+] EMBL FR0057343 [ CCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAAAA GGAAAAAAA ] [+] EMBL FR0057267 [ CTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTAAAACA CGAggg ] [+] EMBL FR0057194 [ TTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAAAA AGAAAAAAAAAAACCCCGGGGGGGGCCCCGGT] [+] EMBL FR0057426 [ AGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAAAAGAGGGGAGGAAGAAGAACC ] consensusID : consensus_2873#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 776 fasta sequence [TTCCCAGTCTAAACCCCAGTCAGCTTGTGCTTAATGACCCCAGCTGTGGTCCCGCCTACAGCGACGATCGCTACGCTTATTTCGTCTTCACTGCAAACTCCTGTGGGACCAACAGAAAGTTTTTTGCCAACATGATGCTGTATGAAAATGAAATTTCTCTGCCAGGTGAACTTGAGATGGAAAAATCAGACGATGAGCCAGAGTATGAGCTGAAAGTGTACTGCTACTATGACATCAATGACACCTATGCTGTGGCCTTCAACACCAGAGCTCGCAGGAGCGAACCGTATGCAGATGACGCACAAGGAGAGCTTCAAGTTGAAATTCGAGTGGCTTCTGATGACGCCTATGCCGCATTTCACACCGAGGCGGATTATCCTGTCCTCAAGTTCCTGCAGGAGCCGGTGTATTTCGAGGTGGAACTGAAGGGAACCAAACTCGCGGCCGTATCGCTGGAACTGGACAGCTGTTGGGCAACGCTTGACGGCGACAGGTTCTCGCAGCCCAGGTGGAACCTCATCATTAAAGGGTGCGTGAACCCAGTGGACCCAAACAAAGTGATCTTCCATCCTGTCCCTGTTGACCAAAGGGTTCATTATCCTTCACATTTTAAGCGATTTGAGGTCCAGATGTTTGCCTTTGCTGATGAAGATAATTTGAGTCATCAGGTTTTTGTTCACTGCGACGTATTTGTCTGTGATGCCAAAAATCCCCAAGATGGAGTTTGTAATAAGCTCTGTTATGAGAAGGAAACCGGAAAGGGTCAAAAACGTGCT] [+] EMBL CA844528 [TTCCCAGTCTAAACCCCAGTCAGCTTGTGCTTAATGACCCCAGCTGTGGTCCCGCCTACAGCGACGATCGCTACGCTTATTTCGTCTTCACTGCAAACTCCTGTGGGACCAACAGAAAGTTTTTTGCCAACATGATGCTGTATGAAAATGAAATTTCTCTGCCAGGTGAACTTGAGATGGAAAAATCAGACGATGAGCCAGAGTATGAGCTGAAAGTGTACTGCTACTATGACATCAATGACACCTATGCTGTGGCCTTCAACACCAGAGCTCGCAGGAGCGAACCGTATGCAGATGACGCACAAGGAGAGCTTCAAGTTGAAATTCGAGTGGCTTCTGATGACGCCTATGCCGCATTTCACACCGAGGCGGATTATCCTGTCCTCAAGTTCCTGCAGGAGCCGGTGTATTTCGAGGTGGAACTGAAGGGAACCAAACTCGCGGCCGTATCGCTGGAACTGGACAGCTGTTGGGCAACGCTTGACGGCGACAGGTTCTCGCAGCCCAGGTGGAACCTCATCATTAAAGGGTGCGTGAACCCAGTGGACCCAAACAAAGTGATCTTCCATCCTGTCCCTGTTGACCAAAGGGTTCATTATCCTTCACATTTTAAGCGATTTGAGGTCCAGATGTTTGCCTTTGCTGATGAAGATAATTTGAGTCATCAGGTTTTTGTTCACTGCGACGTATTTGTCTGTGATGCCAAAAATCCCCAAGATGGAGTTTGTAATAAGCTCTGTTATGAGAAGGAAACCGGAAAGGGTCAAAAACGTGCT] consensusID : consensus_2873#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 484 fasta sequence [AGCCTGAGGTGTCTGAGAAACAAGCCGGCGCTGAATTTGGGTTAGAGGCAGCCGCTTGTTAAGATGGATCCCCACTGCAAGACCAAATCTCGTGCCGAATTCGGCACGAGCCACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGTGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAGTCTCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGC] [+] EMBL FR0057113 [AGCCTGAGGTGTCTGAGAAACAAGCCGGCGCTGAATTTGGGTTAGAGGCAGCCGCTTGTTAAGATGGATCCCCACTGCAAGACCAAATCTCGTGCCGAATTCGGCACGAGCCACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGTGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAGTCTCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGC] consensusID : consensus_2873#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 420 fasta sequence [GTAGATGACCTGCTGTTTGAGCCACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG--TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGT] [+] EMBL FR0057096 [GTAGATGACCTGCTGTTTGAGCCACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGT] [+] EMBL CA846445 [ TTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAG ] [+] EMBL CA846546 [ GATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCCTTCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGTGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAGTCTCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGT] [+] EMBL FR0057216 [ GCTGCTCCTGGGTGTCCCCCTTGTTCTCAGCCTTTAATTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCACATG ] [+] EMBL FR0057133 [ TGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAA ] [+] EMBL FR0057351 [ TGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAA ] [+] EMBL FR0057171 [ TGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAA ] [+] EMBL CA846469 [ TCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCATCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAG ] [+] EMBL CA847222 [ TCCTGGGTTTCCTCCTTGTTCTCCTTCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAA ] [+] EMBL FR0057262 [ CTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAGATGTCAAATAAAACGTTGT ] [+] EMBL FR0057247 [ CTCCTTGTTC CAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTTGTTGTGATTAAGCTTTTA ] [+] EMBL FR0057479 [ TTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGTGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAGTCTCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGGTTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGA ] [+] EMBL FR0057480 [ TCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAA ] [+] EMBL FR0057436 [ CTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGGTGCTCCTCTGCTCCTGCACCGGGACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTT ] consensusID : consensus_2873#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 413 fasta sequence [CTCAAATCGCTTAAAATGTGAAGGATAATGAACCCTTTGGTCAACAGGGACAGGATGGAAGATCACTTTGTTTGGGTCCACTGGGTTCACGCACCCTTTAATGATGAGGTTCCACATGGGCTGCGAGAACCTGTCGCCGTCAAGCGTTGCCCAACAGCTGTCCAGTTCCAGCGATACGGCCGCGAGTTTGGTCTCGTGCCGAATTCGGCACGAGCCACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTCC] [-] EMBL CA844708 [CTCAAATCGCTTAAAATGTGAAGGATAATGAACCCTTTGGTCAACAGGGACAGGATGGAAGATCACTTTGTTTGGGTCCACTGGGTTCACGCACCCTTTAATGATGAGGTTCCACATGGGCTGCGAGAACCTGTCGCCGTCAAGCGTTGCCCAACAGCTGTCCAGTTCCAGCGATACGGCCGCGAGTTTGGTCTCGTGCCGAATTCGGCACGAGCCACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTCC] consensusID : consensus_2873#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 235 fasta sequence [AAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAGTCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTT] [+] EMBL CA844672 [AAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAGTCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2873#0 TCTGTCGGGGCCGCGGCTGCACGACGAGAACATGGCTGTGATGAAATGAGCTGCGGCGTC 60 consensus_2873#3 ------------------------------------------------------------ consensus_2873#2 ------------------------------------------------------------ consensus_2873#5 ------------------------------------------------------------ consensus_2873#4 ------------------------------------------------------------ consensus_2873#1 ----------------------------------------------------------TT 2 consensus_2873#0 CACGTCCCCATCGTCTCCTTGATATTCGGAAAAGTAGAGTCTCAGGTGTCTCCCGGAGTG 120 consensus_2873#3 ------------------------------------------------------------ consensus_2873#2 ------------------------------------------------------------ consensus_2873#5 ------------------------------------------------------------ consensus_2873#4 ------------------------------------------------------------ consensus_2873#1 CCCAGTCTAAACCCCAGTCAGCTTGTGCTTAATGACCCCAGCTGTGGTCCCGCCTACAGC 62 consensus_2873#0 ACGGATCTTCTCCTGGAAAAGGTCGGTTTTGTTCATGAGCAGAATCACTGAGGTCCTCCT 180 consensus_2873#3 ------------------------------------------------------------ consensus_2873#2 ------------------------------------------------------------ consensus_2873#5 ------------------------------------------------------------ consensus_2873#4 -------------------------CTCAAATCGCTTAAAATGTGAAGGATAATGAACCC 35 consensus_2873#1 GACGATCGCTACGCTTATTTCGTCTTCACTGCAAACTCCTGTGGGACCAACAGAAAGTTT 122 consensus_2873#0 GAAGATGCCGTTGGCGCAGGTGGAGGCAAAAAGTTCTAAACTCTCCTGGAGTCGATTCAC 240 consensus_2873#3 ------------------------------------------------------------ consensus_2873#2 ------------------------------------------------------------ consensus_2873#5 ------------------------------------------------------------ consensus_2873#4 TTTGGTCAACAGGGACAGGATGGAAGATCACTTTGTTTGGGTCCACTGGGTTCACGCACC 95 consensus_2873#1 TTTGCCAACATGATGCTGTATGAAAATGAAATTTCTCTGCCAGGTGAACTTGAGATGGAA 182 consensus_2873#0 TGGGGAAGCCTCCATTAGCGTCGTGTCGTAGCTGCTGAGAGCCGCGACAAACCAGACGGC 300 consensus_2873#3 ------------------------------------------------------------ consensus_2873#2 ----------AGCCTGAGGTGTCTGAGAAACAAGCCGGCGCTGAATTTGGGTTAGAGGCA 50 consensus_2873#5 ------------------------------------------------------------ consensus_2873#4 CTTTAATGATGAGGTTCCACATGGGCTGCGAGAACCTGTCGCCGTCAAGCGTTGCCCAAC 155 consensus_2873#1 AAATCAGACGATGAGCCAGAGTATGAGCTGAAAGTGTACTGCTACTATGACATCAATGAC 242 consensus_2873#0 CTGAATGCCTTCGAAGCATTTCAGCCACTTCCTCCTCTCTCGTGCCGAATTCGGCACGGG 360 consensus_2873#3 ---------------------------------------GTAGATGACCTGCTGTTTGAG 21 consensus_2873#2 GCCGCTTGTTAAGATGGATCCCCACTGCAAGACCAAATCTCGTGCCGAATTCGGCACGAG 110 consensus_2873#5 ------------------------------------------------------------ consensus_2873#4 AGCTGTCCAGTTCCAGCGATACGGCCGCGAGTTTGG-TCTCGTGCCGAATTCGGCACGAG 214 consensus_2873#1 ACCTATGCTGTGGC--CTTCAACACCAGAGCTCGCAGGAGCGAACCGTATGCAGATGACG 300 consensus_2873#0 C--ACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTG 418 consensus_2873#3 C-CACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTG 80 consensus_2873#2 C-CACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTG 169 consensus_2873#5 ------------------------------------------------------------ consensus_2873#4 C-CACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTG 273 consensus_2873#1 CACAAGGAGAGCTTCAAGTTGAAATTCGAGTGGCTTCTGATGACGCCTATGCCGCATTTC 360 consensus_2873#0 GTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCA 478 consensus_2873#3 GTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCA 140 consensus_2873#2 GTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCA 229 consensus_2873#5 ------------------------------------------------------------ consensus_2873#4 GTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCA 333 consensus_2873#1 ACACCGAGGCGGATTATC-CTGTCCTCAAGTTCCTGCAGGAGCCGGTGTATTTCGAGGTG 419 consensus_2873#0 GCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACG 538 consensus_2873#3 GCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACG 200 consensus_2873#2 GCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACG 289 consensus_2873#5 -----------------------------------------AAGAAGCTGCTCCTGGGTT 19 consensus_2873#4 GCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACG 393 consensus_2873#1 GAACTGAAGGGAACCAAACTCGCGGC--CGTATCGCTGGAACTGGACAG-CTGTTGGGCA 476 * * ** *** consensus_2873#0 GCGCT-GCTGGCCATGGCTGCTC----CTCTGCTCCTGCACCGGCACTGAATCTTTTAGG 593 consensus_2873#3 GCGCT-GCTGGCCATGGCTGCTC----CTCTGCTCCTGCACCGGCACTGAATCTTTTAGG 255 consensus_2873#2 GTGCT-GCTGGCCATGGCTGCTC----CTCTGCTCCTGCACCGGCACTGAATCTTTTAGG 344 consensus_2873#5 TCCTC-CTTGTTCTCAGCC-TTT----GTTTGGTGCAGGCCCAGAATACCACGGTTCCTG 73 consensus_2873#4 GCGCT-GCTGGCCATGGCTCC--------------------------------------- 413 consensus_2873#1 ACGCTTGACGGCGACAGGTTCTCGCAGCCCAGGTGGAACCTCATCATTAAAGGGTGCGTG 536 * * consensus_2873#0 AGCACCCCGA---CGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAGTCTCT 650 consensus_2873#3 AGCACCCCGA---CGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAGTCTCT 312 consensus_2873#2 AGCACCCCGA---CGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAGTCTCT 401 consensus_2873#5 A-CAACTTGA---CCAT---GCTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAGTCTCT 126 consensus_2873#4 ------------------------------------------------------------ consensus_2873#1 AACCCAGTGGACCCAAACAAAGTGATCTTCCATCCTGTCCCT--GTTGACCAAAGGGTTC 594 consensus_2873#0 --GTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATG 708 consensus_2873#3 --GTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATG 370 consensus_2873#2 CTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATG 461 consensus_2873#5 --GTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATG 184 consensus_2873#4 ------------------------------------------------------------ consensus_2873#1 --ATTATCCTTCACATTTTAAGCGATTTGAGGTCCAGATGTTTGCCTTTGCTGATGAAGA 652 consensus_2873#0 TAGTT---GTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAAAA 765 consensus_2873#3 TAGTT---GTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGT------- 420 consensus_2873#2 TAGTT---GTGATTAAGCTTTTATGC---------------------------------- 484 consensus_2873#5 TAGTT---GTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTT------ 235 consensus_2873#4 ------------------------------------------------------------ consensus_2873#1 TAATTTGAGTCATCAGGTTTTTGTTCAC-TGCGACGTATTTGTCTGTGATGCCAAAAATC 711 consensus_2873#0 GGAAAAAAAAAAACCCCGGGGGGGGCCCCGGT---------------------------- 797 consensus_2873#3 ------------------------------------------------------------ consensus_2873#2 ------------------------------------------------------------ consensus_2873#5 ------------------------------------------------------------ consensus_2873#4 ------------------------------------------------------------ consensus_2873#1 CCCAAGATGGAGTTTGTAATAAGCTCTGTTATGAGAAGGAAACCGGAAAGGGTCAAAAAC 771 consensus_2873#0 ----- consensus_2873#3 ----- consensus_2873#2 ----- consensus_2873#5 ----- consensus_2873#4 ----- consensus_2873#1 GTGCT 776 |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |