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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2883#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 873 fasta sequence
[TTAACTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTAACAATCATGGTTTGGTGTTGACTGATCAGAAACCCTCTGTCAGACACGTGTCCAGATGCAACAGCATGATCTAAAGGGATCCCCGCCGAACTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTGTGCATGTTGTCGCCTTTGACAAGTGATCGCCAACAAATCGTATCCGCTCGGGACGAGGTCGGCACGAGCCATGGTGAACGTTCCAAAGACCCGCAGGACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA-TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATACAAGTTTGAAGTCGAAAAAAAAAAAAAAAAGACCCGGGGGGGGGCCCGGTACCAAGTTTTG]
[-] EMBL CA341061 [TTAACTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTAACAATCATGGTTTGGTGTTGACTGATCAGAAACCCTCTGTCAGACACGTGTCCAGATGCAACAGCATGATCTAAAGGGATCCCCACCGTACTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTGTG ]
[+] EMBL CA330763 [ CCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTGCATGTTGTCGCCTTTGACAAGTGATCGCCAACAAATCGTATCCGCTCGTGCCGAATTCGGCACGAGCCATGGTGAACGTTCCAAAGACCCGCAGGACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGAT ]
[+] EMBL CA333438 [ GCACGAGGTCGCCA CCATGGTGAACCTTCCAAAGACCCGCAGGACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCTAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATACAA ]
[+] EMBL CA846679 [ GGTGAACGTTCCAAAGACCCGCAGGACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCA ]
[+] EMBL CA846551 [ AACGTTCCAAAGACCCGCAGGACTTACTGCAAAAAGTCCTAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGACTACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGT ]
[+] EMBL CA330191 [ AACGTTCCAAAGACCCGCAGGACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCA ]
[+] EMBL CA845051 [ AACGTTCCAAAGACCCGCAGGACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATACA ]
[+] EMBL CA845227 [ TTCCAAAGACCCGCAGGACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATAC ]
[+] EMBL CA330596 [ CAAAGACCCGCAGGACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGTTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATACAAGTT ]
[+] EMBL FR0057269 [ CGCAGGACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATACAAGTTTGAAGTCGACGAAAAGAAGAAAAAGACCCGGGGGGGGG ]
[+] EMBL FR0057338 [ CAGGACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATACAAGTTTGAAGTCGAAAAAAAAAAAAAA ]
[+] EMBL FR0055641 [ GACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGGAAGAGGAGA TACG ]
[+] EMBL FR0057972 [ ACTTACTGCAAAAAGTGCAAGATGCACCAACCCCACAGGGTTACCCAGTACAAAAGGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGGAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAGCT ]
[+] EMBL FR0057256 [ ACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATACAAGTTTGAAGTCGAAAAAAAAAAAA ]
[+] EMBL CA847285 [ CTTACTGCACTAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATA ]
[+] EMBL FR0057309 [ ACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATACAAGTTTGAAGTCGAAAAAAAAAAAAAAAAACCCCGAGGGGGGCCCCGGTACCAAGTTTTG]
[+] EMBL CA333580 [ GCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATACAAGTTTGAA ]
[+] EMBL CA844992 [ CAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGG TTTCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATACAAGTTTGAAGTCGAA ]
[+] EMBL CA846740 [ CTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCA ]
consensusID : consensus_2883#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 383 fasta sequence
[GGCCAAAAATTGGTTCCCGGGCCCCCCCCGGGGTTTTTTTTTTTTTTTTTGGTTTTTAACTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTGCATGTTGTCGCCTTTGACAAGTGATCGCCAACAAATCTGATGGCACAA]
[-] EMBL FR0056569 [GGCCAAAAATTGGTTCCCGGGCCCCCCCCGGGGTTTTTTTTTTTTTTTTTTGTTTTTAACTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTGCATGTTG ]
[-] EMBL CA330557 [ TTTTTTTTTTTGTTTTTAACTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCC ]
[-] EMBL CA330323 [ TGGTTTTTAACTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTAACAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTAACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTGCATGTTGTCGCCTTTGACAAGTGATCGCCAACAAAT ]
[-] EMBL CA845694 [ GGTTTTTAACTTTTATTGTACACAAAAAGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGC ]
[-] EMBL CA330878 [ TTTTTAACTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTGCATGTTGTCGCCTTTGACAAGTGATCGCC ]
[-] EMBL CA330688 [ TTTTTAACTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTGCATGTTGTCGCCTTTGACAAGTGATCGCCAA ]
[-] EMBL CA846790 [ TTTAACTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTGCATGTTGTCGCCTTTGACAAG ]
[-] EMBL CA341073 [ TTAACTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTGCATGTTGTCGCCTTTGACAAGTGA ]
[-] EMBL CA845317 [ CTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTGCATGTTGTCGCCTTTGACAAGTGATCGCCAACAAATCTGATGGCACAA]
[-] EMBL FR0056695 [ TACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTG ]
[-] EMBL FR0056035 [ ACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTGCAT ]
[-] EMBL FR0057001 [ AATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCCTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTC ]
[-] EMBL FR0056472 [ ATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTT ]
[-] EMBL FR0056979 [ gTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCA ]
[-] EMBL FR0057577 [ GCCATTGTTTAGAAGTTCTTGGCAATGACCCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGAGGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTGCATGTTGTCGCCTTTG ]
[-] EMBL FR0056594 [ TCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTC ]
[-] EMBL CA846942 [ CTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTTCATAAATTCTC ]
consensusID : consensus_2883#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 375 fasta sequence
[AAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGATACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGGCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGGCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAGTAAATGTATCAATACAAGGGTGTCGGGGGGAAAAGAATCCCGGGGGGGG]
[+] EMBL FR0057723 [AAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGATACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGGCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGGCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAGTAAATGTATCAATACAAGGGTGTCGGGGGGAAAAGAATCCCGGGGGGGG]
consensusID : consensus_2883#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 218 fasta sequence
[TTTTTTTTTGACCGATACATTTATTGAAAATTGTGACAATTTCCTCCAGAAAACTGAGCCACAGTTTAGGACTGGACCCCCCCTTCTCTTTCTCTTCCTCCCCTCTTCTTCCTCCTTTTCTGACTTCATTTTATTTTTTTATTCCCGTCTTTGTGCTCGTTTTTGCTGTAATTGTTTTGTTTTTTTTTCCAATAAAATCATTTTTGATTCTTGTTAAA]
[+] EMBL CA341165 [TTTTTTTTTGACCGATACATTTATTGAAAATTGTGACAATTTCCTCCAGAAAACTGAGCCACAGTTTAGGACTGGACCCCCCCTTCTCTTTCTCTTCCTCCCCTCTTCTTCCTCCTTTTCTGACTTCATTTTATTTTTTTATTCCCGTCTTTGTGCTCGTTTTTGCTGTAATTGTTTTGTTTTTTTTTCCAATAAAATCATTTTTGATTCTTGTTAAA]
[+] EMBL CA341180 [ TTTATTGAAAATTGTGACAATTTCCTCCAGAAAACTGAGCCACAGTTTAGGACTGGACCCCCCCTTCTCTTTCTCTTCCTCCCCTCTTCTTCCTCCTTTTCTGACTTCATTTTATTTTTTTATTCCCGTCTTTGTGCTCGTTTTTGCTGTAATTGTTTTGTT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2883#0 TTAACTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGT 60
consensus_2883#2 ------------------------------------------------------------
consensus_2883#1 ------------------------------------------------------------
consensus_2883#3 ------------------------------------------------------------
consensus_2883#0 TCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGA 120
consensus_2883#2 ------------------------------------------------------------
consensus_2883#1 ------------------------------------------------------------
consensus_2883#3 ------------------------------------------------------------
consensus_2883#0 TGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTAACAATCATGGTTTG 180
consensus_2883#2 ------------------------------------------------------------
consensus_2883#1 ------------------------------------------------------------
consensus_2883#3 ------------------------------------------------------------
consensus_2883#0 GTGTTGACTGATCAGAAACCCTCTGTCAGACACGTGTCCAGATGCAACAGCATGATCTAA 240
consensus_2883#2 ------------------------------------------------------------
consensus_2883#1 ------------------------------------------------------------
consensus_2883#3 ------------------------------------------------------------
consensus_2883#0 AGGGATCCCCGCCGAACTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGA 300
consensus_2883#2 ------------------------------------------------------------
consensus_2883#1 ------------------------------------------------------------
consensus_2883#3 ------------------------------------------------------------
consensus_2883#0 TGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGT 360
consensus_2883#2 ------------------------------------------------------------
consensus_2883#1 ------------------------------------------------------------
consensus_2883#3 ------------------------------------------------------------
consensus_2883#0 CGTTGTGCATGTTGTCGCCTTTGACAAGTGATCGCCAACAAATCGTATCCGCTCGGGACG 420
consensus_2883#2 ------------------------------------------------------------
consensus_2883#1 ------------------------------------------------------------
consensus_2883#3 ------------------------------------------------------------
consensus_2883#0 AGGTCGGCACGAGCCATGGTGAACGTTCCAAAGACCCGCAGGACTTACTGCAAAAAGTGC 480
consensus_2883#2 ----------------------------------------------------AAAAGTGC 8
consensus_2883#1 -------------------------------GGCCAAAAATTGGTTCCCGGGCCCCCCCC 29
consensus_2883#3 ------------------------------------------------------------
consensus_2883#0 AAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCT 540
consensus_2883#2 AAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCT 68
consensus_2883#1 GGGGTTTTTTTTTTTTTTTTTGGTTTTTAACTTTTATTGTACACAATTTGCCATCGTTCA 89
consensus_2883#3 ------------TTTTTTTTTGACCGATA-CATTTATTG----AAAATTGTGACAATTTC 43
* * * * ** *
consensus_2883#0 CAGGGTAAGAGGAGATACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATT 600
consensus_2883#2 CAGGGTAAGAGGAGATACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATT 128
consensus_2883#1 GAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTC 149
consensus_2883#3 ----CTCCAGAAAACTGAGCCACAGTTTAGGACTGGACCCCCCCTT--CTCTTTCTCTTC 97
* * * * * * * *
consensus_2883#0 TTCCGGAAAAAGGCTAAAACTACAAAGAAAATTG-TCTTGAGGCTCGAGTGTGTGGAGCC 659
consensus_2883#2 TTCCGGAAAAAGGCTAAAACTACAAAGAAAATTG-TCTTGAGGCTCGAGTGTGTGGAGCC 187
consensus_2883#1 CCCCATCCTGCGGATGGCGCCACAGATGGCGTAG-GTCTTAAACTGACTGTTGAAGCGCC 208
consensus_2883#3 CTCCCCTCTTCTTCCTCCTTTTCTGACTTCATTTTATTTTTTTATTCCCGTCTTTGTGCT 157
** * * * * * * **
consensus_2883#0 CAACTGCAGATCCAA----GAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGG 715
consensus_2883#2 CAACTGCAGATCCAA----GAGAATGCTGGGCATCAAGAGATGCAAGCACTTCGAGTTGG 243
consensus_2883#1 CGGTTACCTTGTCGACCTCAGCAATGTTGATC-TGGATGGACGCATGGTCCTTGGCTCCG 267
consensus_2883#3 CGTTTTTGCTGTAAT--TGTTTTGTTTTTTTTTCCAATAAA---ATCATTTTTGATTCTT 212
* * * * * * * * * *
consensus_2883#0 GTG-----GTGACAAGAAGAGAAAGGG-CCAGGTCATCCAGTTCTAAACTGTGGCTCAGT 769
consensus_2883#2 GTG-----GTGACAAGAAGAGAAAGGG-GCAGGTCATCCAGTTCTAAACTGTGGCTCAGT 297
consensus_2883#1 ATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCAC-CAGC 326
consensus_2883#3 GTTAAA------------------------------------------------------ 218
*
consensus_2883#0 TTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATACAAGTTTGAAGTCGAAA 829
consensus_2883#2 TTTCTGGAGGAAATTGTCACAATTTTCAGTAAATGTATCAATACAAG---GGTGTCGGGG 354
consensus_2883#1 GTCGTTCTGCATGTTGTCGC---CTTTGACAAGTGATCGCCAACAAATCTGATGGCACAA 383
consensus_2883#3 ------------------------------------------------------------
consensus_2883#0 AAAAAAAAAAAAAGACCCGGGGGGGGGCCCGGTACCAAGTTTTG 873
consensus_2883#2 GGAAAAGAAT-----CCCGGGGGGGG------------------ 375
consensus_2883#1 --------------------------------------------
consensus_2883#3 --------------------------------------------
|
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |