These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2883#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 873 fasta sequence [TTAACTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTAACAATCATGGTTTGGTGTTGACTGATCAGAAACCCTCTGTCAGACACGTGTCCAGATGCAACAGCATGATCTAAAGGGATCCCCGCCGAACTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTGTGCATGTTGTCGCCTTTGACAAGTGATCGCCAACAAATCGTATCCGCTCGGGACGAGGTCGGCACGAGCCATGGTGAACGTTCCAAAGACCCGCAGGACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA-TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATACAAGTTTGAAGTCGAAAAAAAAAAAAAAAAGACCCGGGGGGGGGCCCGGTACCAAGTTTTG] [-] EMBL CA341061 [TTAACTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTAACAATCATGGTTTGGTGTTGACTGATCAGAAACCCTCTGTCAGACACGTGTCCAGATGCAACAGCATGATCTAAAGGGATCCCCACCGTACTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTGTG ] [+] EMBL CA330763 [ CCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTGCATGTTGTCGCCTTTGACAAGTGATCGCCAACAAATCGTATCCGCTCGTGCCGAATTCGGCACGAGCCATGGTGAACGTTCCAAAGACCCGCAGGACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGAT ] [+] EMBL CA333438 [ GCACGAGGTCGCCA CCATGGTGAACCTTCCAAAGACCCGCAGGACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCTAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATACAA ] [+] EMBL CA846679 [ GGTGAACGTTCCAAAGACCCGCAGGACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCA ] [+] EMBL CA846551 [ AACGTTCCAAAGACCCGCAGGACTTACTGCAAAAAGTCCTAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGACTACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGT ] [+] EMBL CA330191 [ AACGTTCCAAAGACCCGCAGGACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCA ] [+] EMBL CA845051 [ AACGTTCCAAAGACCCGCAGGACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATACA ] [+] EMBL CA845227 [ TTCCAAAGACCCGCAGGACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATAC ] [+] EMBL CA330596 [ CAAAGACCCGCAGGACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGTTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATACAAGTT ] [+] EMBL FR0057269 [ CGCAGGACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATACAAGTTTGAAGTCGACGAAAAGAAGAAAAAGACCCGGGGGGGGG ] [+] EMBL FR0057338 [ CAGGACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATACAAGTTTGAAGTCGAAAAAAAAAAAAAA ] [+] EMBL FR0055641 [ GACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGGAAGAGGAGA TACG ] [+] EMBL FR0057972 [ ACTTACTGCAAAAAGTGCAAGATGCACCAACCCCACAGGGTTACCCAGTACAAAAGGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGGAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAGCT ] [+] EMBL FR0057256 [ ACTTACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATACAAGTTTGAAGTCGAAAAAAAAAAAA ] [+] EMBL CA847285 [ CTTACTGCACTAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATA ] [+] EMBL FR0057309 [ ACTGCAAAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATACAAGTTTGAAGTCGAAAAAAAAAAAAAAAAACCCCGAGGGGGGCCCCGGTACCAAGTTTTG] [+] EMBL CA333580 [ GCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATACAAGTTTGAA ] [+] EMBL CA844992 [ CAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGA TACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGG TTTCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATACAAGTTTGAAGTCGAA ] [+] EMBL CA846740 [ CTGGCCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCA ] consensusID : consensus_2883#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 383 fasta sequence [GGCCAAAAATTGGTTCCCGGGCCCCCCCCGGGGTTTTTTTTTTTTTTTTTGGTTTTTAACTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTGCATGTTGTCGCCTTTGACAAGTGATCGCCAACAAATCTGATGGCACAA] [-] EMBL FR0056569 [GGCCAAAAATTGGTTCCCGGGCCCCCCCCGGGGTTTTTTTTTTTTTTTTTTGTTTTTAACTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTGCATGTTG ] [-] EMBL CA330557 [ TTTTTTTTTTTGTTTTTAACTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCC ] [-] EMBL CA330323 [ TGGTTTTTAACTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTAACAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTAACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTGCATGTTGTCGCCTTTGACAAGTGATCGCCAACAAAT ] [-] EMBL CA845694 [ GGTTTTTAACTTTTATTGTACACAAAAAGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGC ] [-] EMBL CA330878 [ TTTTTAACTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTGCATGTTGTCGCCTTTGACAAGTGATCGCC ] [-] EMBL CA330688 [ TTTTTAACTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTGCATGTTGTCGCCTTTGACAAGTGATCGCCAA ] [-] EMBL CA846790 [ TTTAACTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTGCATGTTGTCGCCTTTGACAAG ] [-] EMBL CA341073 [ TTAACTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTGCATGTTGTCGCCTTTGACAAGTGA ] [-] EMBL CA845317 [ CTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTGCATGTTGTCGCCTTTGACAAGTGATCGCCAACAAATCTGATGGCACAA] [-] EMBL FR0056695 [ TACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTG ] [-] EMBL FR0056035 [ ACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTGCAT ] [-] EMBL FR0057001 [ AATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCCTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTC ] [-] EMBL FR0056472 [ ATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTT ] [-] EMBL FR0056979 [ gTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCA ] [-] EMBL FR0057577 [ GCCATTGTTTAGAAGTTCTTGGCAATGACCCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTCAGCAATGTTGATCTGGATGGAGGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGTCGTTCTGCATGTTGTCGCCTTTG ] [-] EMBL FR0056594 [ TCGTTCAGAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGATGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTCGACCTC ] [-] EMBL CA846942 [ CTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTTCATAAATTCTC ] consensusID : consensus_2883#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 375 fasta sequence [AAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGATACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGGCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGGCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAGTAAATGTATCAATACAAGGGTGTCGGGGGGAAAAGAATCCCGGGGGGGG] [+] EMBL FR0057723 [AAAAGTGCAAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCTCAGGGTAAGAGGAGATACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATTTTCCGGAAAAAGGCTAAAACTACAAAGAAAATTGTCTTGAGGCTCGAGTGTGTGGAGCCCAACTGCAGATCCAAGAGAATGCTGGGCATCAAGAGATGCAAGCACTTCGAGTTGGGTGGTGACAAGAAGAGAAAGGGGCAGGTCATCCAGTTCTAAACTGTGGCTCAGTTTTCTGGAGGAAATTGTCACAATTTTCAGTAAATGTATCAATACAAGGGTGTCGGGGGGAAAAGAATCCCGGGGGGGG] consensusID : consensus_2883#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 218 fasta sequence [TTTTTTTTTGACCGATACATTTATTGAAAATTGTGACAATTTCCTCCAGAAAACTGAGCCACAGTTTAGGACTGGACCCCCCCTTCTCTTTCTCTTCCTCCCCTCTTCTTCCTCCTTTTCTGACTTCATTTTATTTTTTTATTCCCGTCTTTGTGCTCGTTTTTGCTGTAATTGTTTTGTTTTTTTTTCCAATAAAATCATTTTTGATTCTTGTTAAA] [+] EMBL CA341165 [TTTTTTTTTGACCGATACATTTATTGAAAATTGTGACAATTTCCTCCAGAAAACTGAGCCACAGTTTAGGACTGGACCCCCCCTTCTCTTTCTCTTCCTCCCCTCTTCTTCCTCCTTTTCTGACTTCATTTTATTTTTTTATTCCCGTCTTTGTGCTCGTTTTTGCTGTAATTGTTTTGTTTTTTTTTCCAATAAAATCATTTTTGATTCTTGTTAAA] [+] EMBL CA341180 [ TTTATTGAAAATTGTGACAATTTCCTCCAGAAAACTGAGCCACAGTTTAGGACTGGACCCCCCCTTCTCTTTCTCTTCCTCCCCTCTTCTTCCTCCTTTTCTGACTTCATTTTATTTTTTTATTCCCGTCTTTGTGCTCGTTTTTGCTGTAATTGTTTTGTT ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2883#0 TTAACTTTTATTGTACACAATTTGCCATCGTTCAGAAGTTCTTGGCAATGACGCCGTCGT 60 consensus_2883#2 ------------------------------------------------------------ consensus_2883#1 ------------------------------------------------------------ consensus_2883#3 ------------------------------------------------------------ consensus_2883#0 TCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTCCCCCATCCTGCGGATGGCGCCACAGA 120 consensus_2883#2 ------------------------------------------------------------ consensus_2883#1 ------------------------------------------------------------ consensus_2883#3 ------------------------------------------------------------ consensus_2883#0 TGGCGTAGGTCTTAAACTGACTGTTGAAGCGCCCGGTTACCTTGTAACAATCATGGTTTG 180 consensus_2883#2 ------------------------------------------------------------ consensus_2883#1 ------------------------------------------------------------ consensus_2883#3 ------------------------------------------------------------ consensus_2883#0 GTGTTGACTGATCAGAAACCCTCTGTCAGACACGTGTCCAGATGCAACAGCATGATCTAA 240 consensus_2883#2 ------------------------------------------------------------ consensus_2883#1 ------------------------------------------------------------ consensus_2883#3 ------------------------------------------------------------ consensus_2883#0 AGGGATCCCCGCCGAACTCAGCAATGTTGATCTGGATGGACGCATGGTCCTTGGCTCCGA 300 consensus_2883#2 ------------------------------------------------------------ consensus_2883#1 ------------------------------------------------------------ consensus_2883#3 ------------------------------------------------------------ consensus_2883#0 TGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCACCAGCGT 360 consensus_2883#2 ------------------------------------------------------------ consensus_2883#1 ------------------------------------------------------------ consensus_2883#3 ------------------------------------------------------------ consensus_2883#0 CGTTGTGCATGTTGTCGCCTTTGACAAGTGATCGCCAACAAATCGTATCCGCTCGGGACG 420 consensus_2883#2 ------------------------------------------------------------ consensus_2883#1 ------------------------------------------------------------ consensus_2883#3 ------------------------------------------------------------ consensus_2883#0 AGGTCGGCACGAGCCATGGTGAACGTTCCAAAGACCCGCAGGACTTACTGCAAAAAGTGC 480 consensus_2883#2 ----------------------------------------------------AAAAGTGC 8 consensus_2883#1 -------------------------------GGCCAAAAATTGGTTCCCGGGCCCCCCCC 29 consensus_2883#3 ------------------------------------------------------------ consensus_2883#0 AAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCT 540 consensus_2883#2 AAGAAGCACCAACCCCACAAAGTTACCCAGTACAAAAAGGGGAAGGATTCCCTCTATGCT 68 consensus_2883#1 GGGGTTTTTTTTTTTTTTTTTGGTTTTTAACTTTTATTGTACACAATTTGCCATCGTTCA 89 consensus_2883#3 ------------TTTTTTTTTGACCGATA-CATTTATTG----AAAATTGTGACAATTTC 43 * * * * ** * consensus_2883#0 CAGGGTAAGAGGAGATACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATT 600 consensus_2883#2 CAGGGTAAGAGGAGATACGACAGAAAGCAGAGCGGTTACGGGGGTCAAACGAAGCCTATT 128 consensus_2883#1 GAAGTTCTTGGCAATGACGCCGTCGTTCTTGGCCAGTCTCAGGATGGAGTCGTCCGATTC 149 consensus_2883#3 ----CTCCAGAAAACTGAGCCACAGTTTAGGACTGGACCCCCCCTT--CTCTTTCTCTTC 97 * * * * * * * * consensus_2883#0 TTCCGGAAAAAGGCTAAAACTACAAAGAAAATTG-TCTTGAGGCTCGAGTGTGTGGAGCC 659 consensus_2883#2 TTCCGGAAAAAGGCTAAAACTACAAAGAAAATTG-TCTTGAGGCTCGAGTGTGTGGAGCC 187 consensus_2883#1 CCCCATCCTGCGGATGGCGCCACAGATGGCGTAG-GTCTTAAACTGACTGTTGAAGCGCC 208 consensus_2883#3 CTCCCCTCTTCTTCCTCCTTTTCTGACTTCATTTTATTTTTTTATTCCCGTCTTTGTGCT 157 ** * * * * * * ** consensus_2883#0 CAACTGCAGATCCAA----GAGAATGCTGGCCATCAAGAGATGCAAGCACTTCGAGTTGG 715 consensus_2883#2 CAACTGCAGATCCAA----GAGAATGCTGGGCATCAAGAGATGCAAGCACTTCGAGTTGG 243 consensus_2883#1 CGGTTACCTTGTCGACCTCAGCAATGTTGATC-TGGATGGACGCATGGTCCTTGGCTCCG 267 consensus_2883#3 CGTTTTTGCTGTAAT--TGTTTTGTTTTTTTTTCCAATAAA---ATCATTTTTGATTCTT 212 * * * * * * * * * * consensus_2883#0 GTG-----GTGACAAGAAGAGAAAGGG-CCAGGTCATCCAGTTCTAAACTGTGGCTCAGT 769 consensus_2883#2 GTG-----GTGACAAGAAGAGAAAGGG-GCAGGTCATCCAGTTCTAAACTGTGGCTCAGT 297 consensus_2883#1 ATGATTCTGTTGCTCGCAGAGCATTTACGAGGGACGTACAGGTCCACAAATTCAC-CAGC 326 consensus_2883#3 GTTAAA------------------------------------------------------ 218 * consensus_2883#0 TTTCTGGAGGAAATTGTCACAATTTTCAATAAATGTATCAATACAAGTTTGAAGTCGAAA 829 consensus_2883#2 TTTCTGGAGGAAATTGTCACAATTTTCAGTAAATGTATCAATACAAG---GGTGTCGGGG 354 consensus_2883#1 GTCGTTCTGCATGTTGTCGC---CTTTGACAAGTGATCGCCAACAAATCTGATGGCACAA 383 consensus_2883#3 ------------------------------------------------------------ consensus_2883#0 AAAAAAAAAAAAAGACCCGGGGGGGGGCCCGGTACCAAGTTTTG 873 consensus_2883#2 GGAAAAGAAT-----CCCGGGGGGGG------------------ 375 consensus_2883#1 -------------------------------------------- consensus_2883#3 -------------------------------------------- |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |