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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_367#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 616 fasta sequence
[CTGGAGAATTTAATTTTCCATTAACAAATATAAAAATAAACACATTTAATGCTTTTAGTTACAAAATCAGTAATAAATTAAAACGACACAGTCAAGAGTCGGATTCTGAACTGGAGTCCGTGGAGCTGCACGAGGAGGATGTGGAAGAGCTGCTGCAGCCTGACTGAGATGCAGCCTGATTGCTTCTCTTCTGAAATCTCTTAAACTTCTGATGCAGACATTTCTTCACGTACTGCTGAAGCCGGCGCAGCGTGGACGGCTTCAGCACCTCAAAGTCGATCTCTATCTCGTCTGGGTTGGTCTCGCACATGGAGGGCTCCAGCGTTTGAATGATCTGCACCACGCGGCCCAGTTTCTTGCCAGGTAGACGGTTAATATCCAAGCTCAGCTGGTGCTTCTCCTCGTACGTCAATGGAAGACATTTGTTATCGGGATCCCAGGTTTTTAACTTGCAAGGACTCCCAGGGTCAGAGGTCGGACTGCCTCTGGGTTGCCTGTCGGTTTTGCTTTCATCATCCTTTCTCTTTCTTTATTCACGGGGACTTCAAAAAATGGAGCAAGGGATCAGGGACAGCTTTAACTGTTCTGCCCCACCTGTTCCTGCAAATCACAAGTG]
[+] EMBL CA331155 [CTGGAGAATTTAATTTTCCATTAACAAATATAAAAATAAACACATTTAATGCTTTTAGTTACAAAATCAGTAATAAATTAAAACGACACAGTCAAGAGTCGGATTCTGAACTGGAGTCCGTGGAGCTGCACGAGGAGGATGTGGAAGAGCTGCTGCAGCCTGACTGAGATGCAGCCTGATTGCTTCTCTTCTGAAATCTCTTAAACTTCTGATGCAGACATTTCTTCACGTACTGCTGAAGCCGGCGCAGCGTGGACGGCTTCAGCACCTCAAAGTCGATCTCTATCTCGTCTGGGTTGGTCTCGCACATGGAGGGCTCCAGCGTTTGAATGATCTGCACCACGCGGCCCAGTTTCTTGCCAGGTAGACGGTTAATATCCAAGCTCAGCTGGTGCTTCTCCTCGTACGTCAATGGAAGACATTTGTTATCGGGATCCCAGGTTTTTAACTTGCAAGGACTCCCAGGGTCAGAGGTCGGACTGCCTCTGGGTTGCCTGTCGGTTTTGCTTTCATCATCCTTTCTCTTTCTTTATTCACGGGGACTTCAAAAAATGGAGCAAGGGATCAGGGACAGCTTTAACTGTTCTGCCCCACCTGTTCCTGCAAATCACAAGTG]
consensusID : consensus_367#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 288 fasta sequence
[GGCCCAAAAATCGGGACCCGGCCCCCCCCCGGGGCCATCCCCCCGCGTTTTTTAAAAATAAACACATTTAATGCTCCTAGTCACAAAATCAGTAATAACCTAAAACGACACAGTCAAGAGTCGGATTCTGAACTGGAGTCCGTGGAGCTGCACGAGGAGGATGTGGAAGAGCTGCTGCAGCCTGACTGAGATGCAGCCTGATTGCTTCTCTTCCTGAAATCTCCTAAACTTCTGATGCAGACATTTCTTCACGTACTGCTGAAGCCGGCGCAGCGTGGACGGCTCCAG]
[-] EMBL FR0056711 [GGCCCAAAAATCGGGACCCGGCCCCCCCCCGGGGCCATCCCCCCGCGTTTTTTAAAAATAAACACATTTAATGCTCCTAGTCACAAAATCAGTAATAACCTAAAACGACACAGTCAAGAGTCGGATTCTGAACTGGAGTCCGTGGAGCTGCACGAGGAGGATGTGGAAGAGCTGCTGCAGCCTGACTGAGATGCAGCCTGATTGCTTCTCTTCCTGAAATCTCCTAAACTTCTGATGCAGACATTTCTTCACGTACTGCTGAAGCCGGCGCAGCGTGGACGGCTCCAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_367#0 -------------------------CTGGAGAATTTAATTTTCCATTAACAAATATAAAA 35
consensus_367#1 GGCCCAAAAATCGGGACCCGGCCCCCCCCCGGGGCCATCCCCCCGCGTTT---TTTAAAA 57
* * * ** * *****
consensus_367#0 ATAAACACATTTAATGCTTTTAGTTACAAAATCAGTAATAAATTAAAACGACACAGTCAA 95
consensus_367#1 ATAAACACATTTAATGCTCCTAGTCACAAAATCAGTAATAACCTAAAACGACACAGTCAA 117
****************** **** **************** *****************
consensus_367#0 GAGTCGGATTCTGAACTGGAGTCCGTGGAGCTGCACGAGGAGGATGTGGAAGAGCTGCTG 155
consensus_367#1 GAGTCGGATTCTGAACTGGAGTCCGTGGAGCTGCACGAGGAGGATGTGGAAGAGCTGCTG 177
************************************************************
consensus_367#0 CAGCCTGACTGAGATGCAGCCTGATTGCTTCTCTTC-TGAAATCTCTTAAACTTCTGATG 214
consensus_367#1 CAGCCTGACTGAGATGCAGCCTGATTGCTTCTCTTCCTGAAATCTCCTAAACTTCTGATG 237
************************************ ********* *************
consensus_367#0 CAGACATTTCTTCACGTACTGCTGAAGCCGGCGCAGCGTGGACGGCTTCAGCACCTCAAA 274
consensus_367#1 CAGACATTTCTTCACGTACTGCTGAAGCCGGCGCAGCGTGGACGGCTCCAG--------- 288
*********************************************** ***
consensus_367#0 GTCGATCTCTATCTCGTCTGGGTTGGTCTCGCACATGGAGGGCTCCAGCGTTTGAATGAT 334
consensus_367#1 ------------------------------------------------------------
consensus_367#0 CTGCACCACGCGGCCCAGTTTCTTGCCAGGTAGACGGTTAATATCCAAGCTCAGCTGGTG 394
consensus_367#1 ------------------------------------------------------------
consensus_367#0 CTTCTCCTCGTACGTCAATGGAAGACATTTGTTATCGGGATCCCAGGTTTTTAACTTGCA 454
consensus_367#1 ------------------------------------------------------------
consensus_367#0 AGGACTCCCAGGGTCAGAGGTCGGACTGCCTCTGGGTTGCCTGTCGGTTTTGCTTTCATC 514
consensus_367#1 ------------------------------------------------------------
consensus_367#0 ATCCTTTCTCTTTCTTTATTCACGGGGACTTCAAAAAATGGAGCAAGGGATCAGGGACAG 574
consensus_367#1 ------------------------------------------------------------
consensus_367#0 CTTTAACTGTTCTGCCCCACCTGTTCCTGCAAATCACAAGTG 616
consensus_367#1 ------------------------------------------
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |