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Takifugu rubripes
cluster # 652 cluster # 652       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_652#0 length = 672 sequences # 1  
consensus_652#1 length = 642 sequences # 1  

consensusID : consensus_652#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 672
fasta sequence
                              [GGTGTATCTCCCCTTTGTCTGCTGGCTCACATGCTGGTGAGTCATCAGATCTCCAAAACGGTTTCAGAAGAGAAGACAAAACAGTGCAATTGACAAAGAAAACTACCTTGGATTAAAGCAAATGACCCCCCCCCCCCCATGCCAGTTTTCCAGAAAACCTTTATGTCTCTATTTGCTTGACAGTACAAAACCAATTCCTATGGAATGCATCCCTTTTATATGGGTCTGGAGAAAACAGCCGATGCTCACGGCGTCCTGCTGCTGAACAGTAATGCCATGGATGTGACTTTGCAGCCAACTCCAGCGTTAACCTACAGAACAGTCGGAGGCATCTTGGATTTCTACATGGTCCTGGGACCTACGCCAGAAATGGTGGTGCAGGAGTACACACAACTGATAGGACGACCCGTACTACCTGCCTATTGGACTCTGGGGTTCCAGCTCTGTCGCTATGGTTATGCCAATGACTCAGAAATAGAAGATCTGTACAACAGTATGAGGGCTGCTGGGATCCCCTATGATGTGCAGTATGCTGACATTGACTACATGGACCGCCAACTGAACTTTGTCCTTGATTCGGAATTCTCCCAGTTGCCTGCACTGGTGGACCGCATTCAGGATGAGGGCGGCAGATTTATTATTATTTCTGATCCAGCGATCTCCGGCAATGAG]

[+] EMBL CA847029             [GGTGTATCTCCCCTTTGTCTGCTGGCTCACATGCTGGTGAGTCATCAGATCTCCAAAACGGTTTCAGAAGAGAAGACAAAACAGTGCAATTGACAAAGAAAACTACCTTGGATTAAAGCAAATGACCCCCCCCCCCCCATGCCAGTTTTCCAGAAAACCTTTATGTCTCTATTTGCTTGACAGTACAAAACCAATTCCTATGGAATGCATCCCTTTTATATGGGTCTGGAGAAAACAGCCGATGCTCACGGCGTCCTGCTGCTGAACAGTAATGCCATGGATGTGACTTTGCAGCCAACTCCAGCGTTAACCTACAGAACAGTCGGAGGCATCTTGGATTTCTACATGGTCCTGGGACCTACGCCAGAAATGGTGGTGCAGGAGTACACACAACTGATAGGACGACCCGTACTACCTGCCTATTGGACTCTGGGGTTCCAGCTCTGTCGCTATGGTTATGCCAATGACTCAGAAATAGAAGATCTGTACAACAGTATGAGGGCTGCTGGGATCCCCTATGATGTGCAGTATGCTGACATTGACTACATGGACCGCCAACTGAACTTTGTCCTTGATTCGGAATTCTCCCAGTTGCCTGCACTGGTGGACCGCATTCAGGATGAGGGCGGCAGATTTATTATTATTTCTGATCCAGCGATCTCCGGCAATGAG]


>consensus_652#0 GGTGTATCTCCCCTTTGTCTGCTGGCTCACATGCTGGTGAGTCATCAGATCTCCAAAACG GTTTCAGAAGAGAAGACAAAACAGTGCAATTGACAAAGAAAACTACCTTGGATTAAAGCA AATGACCCCCCCCCCCCCATGCCAGTTTTCCAGAAAACCTTTATGTCTCTATTTGCTTGA CAGTACAAAACCAATTCCTATGGAATGCATCCCTTTTATATGGGTCTGGAGAAAACAGCC GATGCTCACGGCGTCCTGCTGCTGAACAGTAATGCCATGGATGTGACTTTGCAGCCAACT CCAGCGTTAACCTACAGAACAGTCGGAGGCATCTTGGATTTCTACATGGTCCTGGGACCT ACGCCAGAAATGGTGGTGCAGGAGTACACACAACTGATAGGACGACCCGTACTACCTGCC TATTGGACTCTGGGGTTCCAGCTCTGTCGCTATGGTTATGCCAATGACTCAGAAATAGAA GATCTGTACAACAGTATGAGGGCTGCTGGGATCCCCTATGATGTGCAGTATGCTGACATT GACTACATGGACCGCCAACTGAACTTTGTCCTTGATTCGGAATTCTCCCAGTTGCCTGCA CTGGTGGACCGCATTCAGGATGAGGGCGGCAGATTTATTATTATTTCTGATCCAGCGATC TCCGGCAATGAG



consensusID : consensus_652#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 642
fasta sequence
                              [GCAGTACATCCCACCTACAAACACGACCTCAACTATCACACCTGCCTTAATGTTCACCAAGGACCAACCACCGGGTTACAAAACCAATTCCTATGGAATGCATCCCTTTTATATGGGTCTGGAGAAAACAGCCGATGCTCACGGCGTCCTGCTGCTGAACAGTAATGCCATGGATGTGACTTTGCAGCCAACTCCAGCGTTAACCTACAGAACAGTCGGAGGCATCTTGGATTTCTACATGGTCCTGGGACCTACGCCAGAAATGGTGGTGCAGGAGTACACACAACTGATAGGACGACCCGTACTACCTGCCTATTGGACTCTGGGGTTCCAGCTCTGTCGCTATGGTTATGCCAATGACTCAGAAATAGAAGATCTGTACAACAGTATGAGGGCTGCTGGTATCCCCTATGATGTGCAGTATGCTGACATTGACTACATGGACCGCCAACTGAACTTCGTCCTTGATTCGGAATTCTCCAAGTTGCCTGCACTGGTGGAGCGCATTCAGGATGAGGGCGGCAGATTTATTATTATTCTGGATCCAGCGATCTCCGGCAATGAGACGGTCCCTTACCCCGCCTTTGACAGGGGAGTGGCCGATGACGTTTTCATCAAGTGGCCCAAAAACCTCAGTGATGA]

[+] EMBL CA588234             [GCAGTACATCCCACCTACAAACACGACCTCAACTATCACACCTGCCTTAATGTTCACCAAGGACCAACCACCGGGTTACAAAACCAATTCCTATGGAATGCATCCCTTTTATATGGGTCTGGAGAAAACAGCCGATGCTCACGGCGTCCTGCTGCTGAACAGTAATGCCATGGATGTGACTTTGCAGCCAACTCCAGCGTTAACCTACAGAACAGTCGGAGGCATCTTGGATTTCTACATGGTCCTGGGACCTACGCCAGAAATGGTGGTGCAGGAGTACACACAACTGATAGGACGACCCGTACTACCTGCCTATTGGACTCTGGGGTTCCAGCTCTGTCGCTATGGTTATGCCAATGACTCAGAAATAGAAGATCTGTACAACAGTATGAGGGCTGCTGGTATCCCCTATGATGTGCAGTATGCTGACATTGACTACATGGACCGCCAACTGAACTTCGTCCTTGATTCGGAATTCTCCAAGTTGCCTGCACTGGTGGAGCGCATTCAGGATGAGGGCGGCAGATTTATTATTATTCTGGATCCAGCGATCTCCGGCAATGAGACGGTCCCTTACCCCGCCTTTGACAGGGGAGTGGCCGATGACGTTTTCATCAAGTGGCCCAAAAACCTCAGTGATGA]


>consensus_652#1 GCAGTACATCCCACCTACAAACACGACCTCAACTATCACACCTGCCTTAATGTTCACCAA GGACCAACCACCGGGTTACAAAACCAATTCCTATGGAATGCATCCCTTTTATATGGGTCT GGAGAAAACAGCCGATGCTCACGGCGTCCTGCTGCTGAACAGTAATGCCATGGATGTGAC TTTGCAGCCAACTCCAGCGTTAACCTACAGAACAGTCGGAGGCATCTTGGATTTCTACAT GGTCCTGGGACCTACGCCAGAAATGGTGGTGCAGGAGTACACACAACTGATAGGACGACC CGTACTACCTGCCTATTGGACTCTGGGGTTCCAGCTCTGTCGCTATGGTTATGCCAATGA CTCAGAAATAGAAGATCTGTACAACAGTATGAGGGCTGCTGGTATCCCCTATGATGTGCA GTATGCTGACATTGACTACATGGACCGCCAACTGAACTTCGTCCTTGATTCGGAATTCTC CAAGTTGCCTGCACTGGTGGAGCGCATTCAGGATGAGGGCGGCAGATTTATTATTATTCT GGATCCAGCGATCTCCGGCAATGAGACGGTCCCTTACCCCGCCTTTGACAGGGGAGTGGC CGATGACGTTTTCATCAAGTGGCCCAAAAACCTCAGTGATGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_652#0      GGTGTATCTCCCCTTTGTCTGCTGGCTCACATGCTGGTGAGTCATCAGATCTCCAAAACG 60
consensus_652#1      ------------------------------------------------------------
                                                                                 

consensus_652#0      GTTTCAGAAGAGAAGACAAAACAGTGCAATTGACAAAGAAAACTACCTTGGATTAAAGCA 120
consensus_652#1      --------------------------------------------GCAGTACATCCCACCT 16
                                                                  *  *  **   * * 

consensus_652#0      AATGACCCCCCCCCCCCCATGCCAGTTTTCCAGAAAACCTTTATGTCTCTATTTGCTTGA 180
consensus_652#1      ACAAACACGACCTCAACTATCACACCTGCCTTAATGTTCACCAAGGA-CCAACCACCGGG 75
                     *   ** *  ** *  * **  **  *  *   *    *   * *   * *    *  * 

consensus_652#0      CAGTACAAAACCAATTCCTATGGAATGCATCCCTTTTATATGGGTCTGGAGAAAACAGCC 240
consensus_652#1      T--TACAAAACCAATTCCTATGGAATGCATCCCTTTTATATGGGTCTGGAGAAAACAGCC 133
                        *********************************************************

consensus_652#0      GATGCTCACGGCGTCCTGCTGCTGAACAGTAATGCCATGGATGTGACTTTGCAGCCAACT 300
consensus_652#1      GATGCTCACGGCGTCCTGCTGCTGAACAGTAATGCCATGGATGTGACTTTGCAGCCAACT 193
                     ************************************************************

consensus_652#0      CCAGCGTTAACCTACAGAACAGTCGGAGGCATCTTGGATTTCTACATGGTCCTGGGACCT 360
consensus_652#1      CCAGCGTTAACCTACAGAACAGTCGGAGGCATCTTGGATTTCTACATGGTCCTGGGACCT 253
                     ************************************************************

consensus_652#0      ACGCCAGAAATGGTGGTGCAGGAGTACACACAACTGATAGGACGACCCGTACTACCTGCC 420
consensus_652#1      ACGCCAGAAATGGTGGTGCAGGAGTACACACAACTGATAGGACGACCCGTACTACCTGCC 313
                     ************************************************************

consensus_652#0      TATTGGACTCTGGGGTTCCAGCTCTGTCGCTATGGTTATGCCAATGACTCAGAAATAGAA 480
consensus_652#1      TATTGGACTCTGGGGTTCCAGCTCTGTCGCTATGGTTATGCCAATGACTCAGAAATAGAA 373
                     ************************************************************

consensus_652#0      GATCTGTACAACAGTATGAGGGCTGCTGGGATCCCCTATGATGTGCAGTATGCTGACATT 540
consensus_652#1      GATCTGTACAACAGTATGAGGGCTGCTGGTATCCCCTATGATGTGCAGTATGCTGACATT 433
                     ***************************** ******************************

consensus_652#0      GACTACATGGACCGCCAACTGAACTTTGTCCTTGATTCGGAATTCTCCCAGTTGCCTGCA 600
consensus_652#1      GACTACATGGACCGCCAACTGAACTTCGTCCTTGATTCGGAATTCTCCAAGTTGCCTGCA 493
                     ************************** ********************* ***********

consensus_652#0      CTGGTGGACCGCATTCAGGATGAGGGCGGCAGATTTATTATTATTTCTGATCCAGCGATC 660
consensus_652#1      CTGGTGGAGCGCATTCAGGATGAGGGCGGCAGATTTATTATTATTCTGGATCCAGCGATC 553
                     ******** ************************************   ************

consensus_652#0      TCCGGCAATGAG------------------------------------------------ 672
consensus_652#1      TCCGGCAATGAGACGGTCCCTTACCCCGCCTTTGACAGGGGAGTGGCCGATGACGTTTTC 613
                     ************                                                

consensus_652#0      -----------------------------
consensus_652#1      ATCAAGTGGCCCAAAAACCTCAGTGATGA 642
                                                  




Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)