These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_713#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 399 fasta sequence [ATGTCCTCAAAGAGCCCTGTTCGGCAAATGTGTGGTCTGGACACCTGCTACCAGTGGGAAACCTGCGCCGCATCTAAGAAGTGTGAGTGCAAATCTGCAAGGAACTGTGAGCGTGATGAGCAGCAAATGTTCTGTATTAAGCTCACCAGGTCTCCGAGGGCTCGAAGCATGGACCTTTGCTCCATGGCTGCACTCAAGTGTGCAAACTATGATTTTGAGATTCTCAGCGAAGGTGTCTGTGAGTCCAGATGATAATTTTTATATCTACAACTGCTTTTAATGAAACAGGTTTAAAAGTGCCCTCATGTATTGATACTCTTCAGCCAAATGGTGATGGATAAAAAGGTCTTTTCATGGACTAATAAATAAAAATGATCTCAAGAAAAAAAAAAAAAAAAA] [+] EMBL FR0056960 [ATGTCCTCAAAGAGCCCTGTTCGGCAAATGTGTGGTCTGGACACCTGCTACCAGTGGGAAACCTGCGCCGCATCTAAGAAGTGTGAGTGCAAATCTGCAAGGAACTGTGAGCGTGATGAGCAGCAAATGTTCTGTATTAAGCTCACCAGGTCTCCGAGGGCTCGAAGCATGGACCTTTGCTCCATGGCTGCACTCAAGTGTGCAAACTATGATTTTGAGATTCTCAGCGAAGGTGTCTGTGAGTCCAGATGATAATTTTTATATCTACAACTGCTTTTAATGAAACAGGTTTAAAAGTGCCCTCATGTATTGATACTCTTCAGCCAAATGGTGATGGATAAAAAGGTCTTTTCATGGACTAATAAATAAAAATGATCTCAAGAAAAAAAAAAAAAAAAA] consensusID : consensus_713#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 325 fasta sequence [CTATTCTAGATTATCCTGTGCATTTCTGTTTTTAGGTGTTCTGCTTTGTGTGTATAAGAGAACTTGGTGTGCAGTGATAATGACATGAGCGGATGTGTGAATAGTTCCCAGCCAGAGGCCCTCTGCATCCTGAACACAGATGTTGGTGTGGCTGTGTCAGTGTCCCTCTGCACCTTCCACGTCGGGCGCTGCCATGGTGATCCGCTCTTTTTCATCAGCGAGGGGGTGTGTGATCCAGCCGTATCTGGCAGACTGGAGTGGATCAAATTCAGAGCTCAAATGTCCTCAAAGAGCCCTGTTCGGGAAATGTGTGGTCCGGGAACCT] [+] EMBL FR0056847 [CTATTCTAGATTATCCTGTGCATTTCTGTTTTTAGGTGTTCTGCTTTGTGTGTATAAGAGAACTTGGTGTGCAGTGATAATGACATGAGCGGATGTGTGAATAGTTCCCAGCCAGAGGCCCTCTGCATCCTGAACACAGATGTTGGTGTGGCTGTGTCAGTGTCCCTCTGCACCTTCCACGTCGGGCGCTGCCATGGTGATCCGCTCTTTTTCATCAGCGAGGGGGTGTGTGATCCAGCCGTATCTGGCAGACTGGAGTGGATCAAATTCAGAGCTCAAATGTCCTCAAAGAGCCCTGTTCGGGAAATGTGTGGTCCGGGAACCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_713#0 ATGTCCTCAAAGAGCCCTGTTCGGCAAATGTGTGGTCTGGACACCTGCTACCAGTGGGAA 60 consensus_713#1 CTATTCT-AGATTATCCTGT---GCATTTCTGTTTTTAGGTGTTCTGCTTTGTGTGTATA 56 * * ** * * ***** *** * *** * ** ***** *** * consensus_713#0 ACCTGCGCCGCATCTAAGAAGTGTGAGTGCAAATCTGCAAGGAACTGTGAGC-GTGATGA 119 consensus_713#1 A---GAGAACTTGGTGTGCAGTGATAATG---ACATGAGCGGATGTGTGAATAGTTCCCA 110 * * * * * **** * ** * ** *** ***** ** * consensus_713#0 GCAGCAAATGTTCTGTATTAAGCTCACCAGGTCTCCGAGGGCTCGAAGCA-TGGACCTTT 178 consensus_713#1 GCCAGAGGCCCTCTGCATCCTGAACAC-AGATGTTGGTGTGGCTGTGTCAGTGTCCCTCT 169 ** * **** ** * *** ** * * * * * * ** ** *** * consensus_713#0 GCTCCATGGCTGCACTCAAGTGTGCAAACTATGATTTTGAGATTCTCA---GCGAAGGTG 235 consensus_713#1 GCACCTT--CCACG-TCGGGCGCTGCCATGGTGATCCGCTCTTTTTCATCAGCGAGGGGG 226 ** ** * * * ** * * * **** ** *** **** ** * consensus_713#0 TCTGTGAGTCCAGATGATAATTTTTATATCTACAACTGCTTTTAATGAAACAGGTTTAAA 295 consensus_713#1 TGTGTGA-TCCAGCCG-TATCTGGCAGA-CTGGAGTGGATCAAATTCAGA---GCTCAAA 280 * ***** ***** * ** * * * ** * * * * * * * * * *** consensus_713#0 AGTGCCCTCATGTATTGATACTCTTCAGCCAAATGGTGATGGATAAAAAGGTCTTTTCAT 355 consensus_713#1 --TGTCCTCAAAGAGCCCTGTTCGGGAAATGTGTGGTCCGGGAACCT------------- 325 ** ***** * * ** * **** *** consensus_713#0 GGACTAATAAATAAAAATGATCTCAAGAAAAAAAAAAAAAAAAA 399 consensus_713#1 -------------------------------------------- |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |