These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_957#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 353 fasta sequence [ATAAAGTACCGCAAGTGAACGCTGAAAGAGAAATGGAATAAGGTCGTGATAGCATTGTACCGCCTCCGACATGATTTCTCTTACGACCCGACTAGGGGCTCTTTCCCCTTATACGCAAGCGACAGCGTTCACAGTTGCAAGTCCCTTTAAAACTCTGCAACCTGTGATTTTTGTTACTGGAGATAAGGTGTTGTTGTATCCGAAAAAAACGCCTTTGTGTCGCGAATCTGTAAATGGCCAAACCCCGAGGACAGGCCCTTCTGTCAGAGTTAGCATCAATGGATCTACAGGAGGTCGATTTGCACACACAGATATCAGGATACCAGATTTTAATGACTACAGACGCCCAGAGG] [+] EMBL FR0062231 [ATAAAGTACCGCAAGTGAACGCTGAAAGAGAAATGGAATAAGGTCGTGATAGCATTGTACCGCCTCCGACATGATTTCTCTTACGACCCGACTAGGGGCTCTTTCCCCTTATACGCAAGCGACAGCGTTCACAGTTGCAAGTCCCTTTAAAACTCTGCAACCTGTGATTTTTGTTACTGGAGATAAGGTGTTGTTGTATCCGAAAAAAACGCCTTTGTGTCGCGAATCTGTAAATGGCCAAACCCCGAGGACAGGCCCTTCTGTCAGAGTTAGCATCAATGGATCTACAGGAGGTCGATTTGCACACACAGATATCAGGATACCAGATTTTAATGACTACAGACGCCCAGAGG] consensusID : consensus_957#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 283 fasta sequence [AAANATAAAGAAACCTCATAAAGAAAAGGGAGAGGAAAAGAGGACATCTAAAAAGGAGACTAAGGTCGTGATAGCATTGTACCGGTTCCGACATGATTTCTCTTACGACCCGACTAGGGGCTCTTTCCCCTTATACGCAAGCGACAGCGTTCACAGTTGCAAGTCCCTTTAAAACTCTGCAACCTGTGATTTTTGTTACTGGAGATAAGGTGTTGTTGGATCCGAAAAAAACGCCTTTGTGTCGCGAATCTGTAAATGGCCAAACCCCGAGGACAGGCCCTTC] [+] EMBL FR0062664 [AAANATAAAGAAACCTCATAAAGAAAAGGGAGAGGAAAAGAGGACATCTAAAAAGGAGACTAAGGTCGTGATAGCATTGTACCGGTTCCGACATGATTTCTCTTACGACCCGACTAGGGGCTCTTTCCCCTTATACGCAAGCGACAGCGTTCACAGTTGCAAGTCCCTTTAAAACTCTGCAACCTGTGATTTTTGTTACTGGAGATAAGGTGTTGTTGGATCCGAAAAAAACGCCTTTGTGTCGCGAATCTGTAAATGGCCAAACCCCGAGGACAGGCCCTTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_957#0 -----------------ATAAAGTACCGCAAGTGAACGCTGAAA-----GAGAAATGGAA 38 consensus_957#1 AAANATAAAGAAACCTCATAAAGAAAAGGGAGAGGAAAAGAGGACATCTAAAAAGGAGAC 60 ****** * * ** * * * * ** ** consensus_957#0 TAAGGTCGTGATAGCATTGTACCGCCTCCGACATGATTTCTCTTACGACCCGACTAGGGG 98 consensus_957#1 TAAGGTCGTGATAGCATTGTACCGGTTCCGACATGATTTCTCTTACGACCCGACTAGGGG 120 ************************ ********************************** consensus_957#0 CTCTTTCCCCTTATACGCAAGCGACAGCGTTCACAGTTGCAAGTCCCTTTAAAACTCTGC 158 consensus_957#1 CTCTTTCCCCTTATACGCAAGCGACAGCGTTCACAGTTGCAAGTCCCTTTAAAACTCTGC 180 ************************************************************ consensus_957#0 AACCTGTGATTTTTGTTACTGGAGATAAGGTGTTGTTGTATCCGAAAAAAACGCCTTTGT 218 consensus_957#1 AACCTGTGATTTTTGTTACTGGAGATAAGGTGTTGTTGGATCCGAAAAAAACGCCTTTGT 240 ************************************** ********************* consensus_957#0 GTCGCGAATCTGTAAATGGCCAAACCCCGAGGACAGGCCCTTCTGTCAGAGTTAGCATCA 278 consensus_957#1 GTCGCGAATCTGTAAATGGCCAAACCCCGAGGACAGGCCCTTC----------------- 283 ******************************************* consensus_957#0 ATGGATCTACAGGAGGTCGATTTGCACACACAGATATCAGGATACCAGATTTTAATGACT 338 consensus_957#1 ------------------------------------------------------------ consensus_957#0 ACAGACGCCCAGAGG 353 consensus_957#1 --------------- |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |