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These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 957 cluster # 957       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_957#0 length = 353 sequences # 1  
 consensus_957#1 length = 283 sequences # 1  
consensusID : consensus_957#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 353
fasta sequence 
                              [ATAAAGTACCGCAAGTGAACGCTGAAAGAGAAATGGAATAAGGTCGTGATAGCATTGTACCGCCTCCGACATGATTTCTCTTACGACCCGACTAGGGGCTCTTTCCCCTTATACGCAAGCGACAGCGTTCACAGTTGCAAGTCCCTTTAAAACTCTGCAACCTGTGATTTTTGTTACTGGAGATAAGGTGTTGTTGTATCCGAAAAAAACGCCTTTGTGTCGCGAATCTGTAAATGGCCAAACCCCGAGGACAGGCCCTTCTGTCAGAGTTAGCATCAATGGATCTACAGGAGGTCGATTTGCACACACAGATATCAGGATACCAGATTTTAATGACTACAGACGCCCAGAGG]

[+] EMBL FR0062231            [ATAAAGTACCGCAAGTGAACGCTGAAAGAGAAATGGAATAAGGTCGTGATAGCATTGTACCGCCTCCGACATGATTTCTCTTACGACCCGACTAGGGGCTCTTTCCCCTTATACGCAAGCGACAGCGTTCACAGTTGCAAGTCCCTTTAAAACTCTGCAACCTGTGATTTTTGTTACTGGAGATAAGGTGTTGTTGTATCCGAAAAAAACGCCTTTGTGTCGCGAATCTGTAAATGGCCAAACCCCGAGGACAGGCCCTTCTGTCAGAGTTAGCATCAATGGATCTACAGGAGGTCGATTTGCACACACAGATATCAGGATACCAGATTTTAATGACTACAGACGCCCAGAGG]




>consensus_957#0
ATAAAGTACCGCAAGTGAACGCTGAAAGAGAAATGGAATAAGGTCGTGATAGCATTGTAC
CGCCTCCGACATGATTTCTCTTACGACCCGACTAGGGGCTCTTTCCCCTTATACGCAAGC
GACAGCGTTCACAGTTGCAAGTCCCTTTAAAACTCTGCAACCTGTGATTTTTGTTACTGG
AGATAAGGTGTTGTTGTATCCGAAAAAAACGCCTTTGTGTCGCGAATCTGTAAATGGCCA
AACCCCGAGGACAGGCCCTTCTGTCAGAGTTAGCATCAATGGATCTACAGGAGGTCGATT
TGCACACACAGATATCAGGATACCAGATTTTAATGACTACAGACGCCCAGAGG

consensusID : consensus_957#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 283
fasta sequence 
                              [AAANATAAAGAAACCTCATAAAGAAAAGGGAGAGGAAAAGAGGACATCTAAAAAGGAGACTAAGGTCGTGATAGCATTGTACCGGTTCCGACATGATTTCTCTTACGACCCGACTAGGGGCTCTTTCCCCTTATACGCAAGCGACAGCGTTCACAGTTGCAAGTCCCTTTAAAACTCTGCAACCTGTGATTTTTGTTACTGGAGATAAGGTGTTGTTGGATCCGAAAAAAACGCCTTTGTGTCGCGAATCTGTAAATGGCCAAACCCCGAGGACAGGCCCTTC]

[+] EMBL FR0062664            [AAANATAAAGAAACCTCATAAAGAAAAGGGAGAGGAAAAGAGGACATCTAAAAAGGAGACTAAGGTCGTGATAGCATTGTACCGGTTCCGACATGATTTCTCTTACGACCCGACTAGGGGCTCTTTCCCCTTATACGCAAGCGACAGCGTTCACAGTTGCAAGTCCCTTTAAAACTCTGCAACCTGTGATTTTTGTTACTGGAGATAAGGTGTTGTTGGATCCGAAAAAAACGCCTTTGTGTCGCGAATCTGTAAATGGCCAAACCCCGAGGACAGGCCCTTC]




>consensus_957#1
AAANATAAAGAAACCTCATAAAGAAAAGGGAGAGGAAAAGAGGACATCTAAAAAGGAGAC
TAAGGTCGTGATAGCATTGTACCGGTTCCGACATGATTTCTCTTACGACCCGACTAGGGG
CTCTTTCCCCTTATACGCAAGCGACAGCGTTCACAGTTGCAAGTCCCTTTAAAACTCTGC
AACCTGTGATTTTTGTTACTGGAGATAAGGTGTTGTTGGATCCGAAAAAAACGCCTTTGT
GTCGCGAATCTGTAAATGGCCAAACCCCGAGGACAGGCCCTTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_957#0      -----------------ATAAAGTACCGCAAGTGAACGCTGAAA-----GAGAAATGGAA 38
consensus_957#1      AAANATAAAGAAACCTCATAAAGAAAAGGGAGAGGAAAAGAGGACATCTAAAAAGGAGAC 60
                                      ****** *  *  ** * *       *      * **   ** 

consensus_957#0      TAAGGTCGTGATAGCATTGTACCGCCTCCGACATGATTTCTCTTACGACCCGACTAGGGG 98
consensus_957#1      TAAGGTCGTGATAGCATTGTACCGGTTCCGACATGATTTCTCTTACGACCCGACTAGGGG 120
                     ************************  **********************************

consensus_957#0      CTCTTTCCCCTTATACGCAAGCGACAGCGTTCACAGTTGCAAGTCCCTTTAAAACTCTGC 158
consensus_957#1      CTCTTTCCCCTTATACGCAAGCGACAGCGTTCACAGTTGCAAGTCCCTTTAAAACTCTGC 180
                     ************************************************************

consensus_957#0      AACCTGTGATTTTTGTTACTGGAGATAAGGTGTTGTTGTATCCGAAAAAAACGCCTTTGT 218
consensus_957#1      AACCTGTGATTTTTGTTACTGGAGATAAGGTGTTGTTGGATCCGAAAAAAACGCCTTTGT 240
                     ************************************** *********************

consensus_957#0      GTCGCGAATCTGTAAATGGCCAAACCCCGAGGACAGGCCCTTCTGTCAGAGTTAGCATCA 278
consensus_957#1      GTCGCGAATCTGTAAATGGCCAAACCCCGAGGACAGGCCCTTC----------------- 283
                     *******************************************                 

consensus_957#0      ATGGATCTACAGGAGGTCGATTTGCACACACAGATATCAGGATACCAGATTTTAATGACT 338
consensus_957#1      ------------------------------------------------------------
                                                                                 

consensus_957#0      ACAGACGCCCAGAGG 353
consensus_957#1      ---------------


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)