These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_961#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 394 fasta sequence [TTCATAGCAGGGATCTGCTTTGATCTGCTAACGATAATCGACGAGAACGAACAGGATAATGACAATTGTACGGAGGATAAACTGGAACCTCGACAGTGCTTGAAGGGACAGGGACCACAAAAATGCCTGTTACGCACCCCATTTGCTGAGAGATCACCATGGAAACCCCAAGTCAGAAACGCGGTGCTGCCACCCCTTTGTCCCCTGCTCGCATTACGAGGCTGCAGGAGAAGGAGGACCTCTGCAACCTCAATGACAGGCTGGCCGTCTATATCGACAAAGTGCGCTCACTGGAGATTGAGAACGCCAGCCTGCGTCTGCGCATCACGGAGTCAGAGTCCACGGTATGTCGGGACTTGTCAGGAATAAAAGCGACCTATGAGGCAGAGCTCGC] [+] EMBL FR0057672 [TTCATAGCAGGGATCTGCTTTGATCTGCTAACGATAATCGACGAGAACGAACAGGATAATGACAATTGTACGGAGGATAAACTGGAACCTCGACAGTGCTTGAAGGGACAGGGACCACAAAAATGCCTGTTACGCACCCCATTTGCTGAGAGATCACCATGGAAACCCCAAGTCAGAAACGCGGTGCTGCCACCCCTTTGTCCCCTGCTCGCATTACGAGGCTGCAGGAGAAGGAGGACCTCTGCAACCTCAATGACAGGCTGGCCGTCTATATCGACAAAGTGCGCTCACTGGAGATTGAGAACGCCAGCCTGCGTCTGCGCATCACGGAGTCAGAGTCCACGGTATGTCGGGACTTGTCAGGAATAAAAGCGACCTATGAGGCAGAGCTCGC] consensusID : consensus_961#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 193 fasta sequence [CGATAATCGACGAGAACGAGCAGGATAATGACAATTGTACGGAGGATAAACTGGAACCTCGACAGTGCTTGAAGGGACAGGGACCACAAAAATGCTGGTGCATGTGTAGTAAGCAACAAGTTGGAGAGCAGTTCAGGCATATTTTTCAAAGGTGCACACGCCCAACAGCAGACTGCCTTTTTCGCTGGATCCT] [+] EMBL FR0058123 [CGATAATCGACGAGAACGAGCAGGATAATGACAATTGTACGGAGGATAAACTGGAACCTCGACAGTGCTTGAAGGGACAGGGACCACAAAAATGCTGGTGCATGTGTAGTAAGCAACAAGTTGGAGAGCAGTTCAGGCATATTTTTCAAAGGTGCACACGCCCAACAGCAGACTGCCTTTTTCGCTGGATCCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_961#0 TTCATAGCAGGGATCTGCTTTGATCTGCTAACGATAATCGACGAGAACGAACAGGATAAT 60 consensus_961#1 -------------------------------CGATAATCGACGAGAACGAGCAGGATAAT 29 ******************* ********* consensus_961#0 GACAATTGTACGGAGGATAAACTGGAACCTCGACAGTGCTTGAAGGGACAGGGACCACAA 120 consensus_961#1 GACAATTGTACGGAGGATAAACTGGAACCTCGACAGTGCTTGAAGGGACAGGGACCACAA 89 ************************************************************ consensus_961#0 AAATGCCTGT-TACGCACCCCATTTGCTGAGA-GATCACCATGGAAACCCCAAGTCAGAA 178 consensus_961#1 AAATGCTGGTGCATGTGTAGTAAGCAACAAGTTGGAGAGCAGTTCAGGCATATTTTTCAA 149 ****** ** * * * ** * * ** * * * * ** consensus_961#0 ACGCGGTGCTGCCACCCCTTTGTCCCCTGCTCGCATTACGAGGCTGCAGGAGAAGGAGGA 238 consensus_961#1 A---GGTGCACACGCCCAACAGCAGACTGCCTTTTTCGCTGGATCCT------------- 193 * ***** * *** * **** * * * consensus_961#0 CCTCTGCAACCTCAATGACAGGCTGGCCGTCTATATCGACAAAGTGCGCTCACTGGAGAT 298 consensus_961#1 ------------------------------------------------------------ consensus_961#0 TGAGAACGCCAGCCTGCGTCTGCGCATCACGGAGTCAGAGTCCACGGTATGTCGGGACTT 358 consensus_961#1 ------------------------------------------------------------ consensus_961#0 GTCAGGAATAAAAGCGACCTATGAGGCAGAGCTCGC 394 consensus_961#1 ------------------------------------ |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |