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Anopheles gambiae
cluster # 10171 cluster # 10171       Sequences # 29       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10171#0 length = 993 sequences # 17  
consensus_10171#1 length = 705 sequences # 10  
consensus_10171#2 length = 507 sequences # 1  
consensus_10171#3 length = 225 sequences # 1  

consensusID : consensus_10171#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 993
fasta sequence
                              [CCGGAGAGGATACGGGATTAAGATCATCCACCGTACCCCGTGTATGGGACGGTTGTCTATTTTTACATAAACGGCGCAAGACCGGTTAAGCAGCGTCTTCTCTGAGGGATGACGACTTGATATTGTTTGGTTGGATGGATTGGTGGTTGGCACATATCCCCACCACAAAATCGTTCGTTGCGTCGGTCCGGAAATGGCCAGCCGGACCGTAGGAACGCCAACCGATCGGGCAGTTGAGTCGCATCCTTCGACGGATACACATCACCACAGTTAAACAAGCAACTCGTTGACAAAGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGCGGTTCCGGTGGT------GGT---GGTGGTGG---CCAGCCGGG-CGGTGGTAAAAAAGGCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAG-CAGACAAGGGAGCCGGAAAGAAGGGTGGTAAAAAGTGATGGGATGGATTTCCTCGGACAGCAGCTCACCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTTGAATTGTGATTTGGACTGTGAACATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCGCAAGCACTCGTACGCGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAAACCAATCCGCTGCTGTAGTATTTTTCCATCTCTTTCGCTATTCAACCACCTCTCATCGTATCCACCAACACATCTTTCACTA-GACGACGACAAGAGCA-CCTTCTCTATCTATGGTTAAGATTTGTTTTATATTA-TTTTCCTCGCAAGTGAATATACATTTAAAAGCTTTCAATGGAAATAAAAGAAACAAGCTATTCA]

[+] EMBL BM623864             [CCGGAGAGGATACGGGATTAAGATCATCCACCGTACCCCGTGTATGGGACGGTTGTCTATTTTTACATAAACGGCGCAAGACCGGTTAAGCAGCGTCTTCTCTGAGGGATGACGACTTGATATTGTTTGGTTGGATGGATTGGTGGTTGGCACATATCCCCACCACAAAATCGTTCGTTGCGTCGGTCCGGAAATGGCCAGCCGGACCGTAGGAACGCCAACCGATCGGGCAGTTGAGTCGCATCCTTCGACGGATACACATCACAAACGTTAAACAAGCAACTCGTTGACAAAGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGTGGTTCCGGTGGTGGTGGCGGT   GGTGGTGG   CCAGCCGGG CGGTGGT       GCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAG CAGACAAGGGAGCCGGAAAGAAGGGTGGTAAAAAGTGATGGGATGGATTTCCTCGGACAGCAGCTCACCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTCAAATTGTGATTTGGACTGTGCTCATTATTATTCAAGCGTTTACCGATGTATTTATTGTTG                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM613038             [                                                                                                                                  ccGGATGGATTGGTGGTTGGCACATATCCCCACCACAAAATCGTTCGTTGCGTCGGTCCGGAAATGGCCAGCCGGACCGTAGGAACGCCAACCGATCGGGCAGTTGAGTCGCATCCTTCGACGGATACACATCACCACAGTTAAACAAGCAACTCGTTGACAAAGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGCGGTTCCGGTGGT      GGT   GGTTGTGG   CCAGCCGGG CGGTGGTAAAAAAGGCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAG CAGACAAGGGAGCCGGAAAGAAGGGTGGTAAAAAGTGATGGAATGGATTTCCTCGGACAGCAGCTCATCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTTGAATTGTGATTTGGACTGTGAACATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCGCAAGCACTCGTACGCGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAA CAGTACTCAATAGACACGAAA                                                                                                                                                                                                        ]
[+] EMBL BM652115             [                                                                                                                                                                                                                                              cCGCATCCTTCGACGGATACACATCACCACAGTTAAACAAGCAACTCGTTGACAAAGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGCGGTTCCGGTGGT      GGT   GGTTGTGG   CCAGCCGGG CGGTGGTAAAAAAGGCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAG CAGACAAGGGAGCCGGAAAGAAGGGTGGTAAAAAGTGATGGAATGGATTTCCTCGGACAGCAGCTCATCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTTGAATTGTGATTTGGACTGTGAACATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCGCAAGCACTCGTACGCGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAAACCAATCCGCTGCTGTAGTATTTTTCCATCTCTTTCGCTATTCAACCACCTCTCATCGTATCCACCAACACATCTTTCACTA GACGACGACAAGAGCA CCTTCTCTATCTATGGGTAAGA                                                                               ]
[+] EMBL BM653676             [                                                                                                                                                                                                                                            ccgCGCATCCTTCGACGGATACACATCACCACAGTTAAACAAGCAACTCGTTGACAAAGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGCGGTTCCGGTGGT      GGT   GGTGGTGG   CCAGCCGGG CGGTGGTAAAAAAGGCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAG CAGACAAGGGAACCGGAAAGAAGGGTGGTAAAAAGTGATGGGATGGATTTCCTCGGACAGCAGCTCACCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTTGAATTGTGATTTGGACTGTGAACATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCGCAAGCACTCGTACGCGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAAACCAATCCGCTGCTGTAGTATTTTTCCATCTCTTTCGCTATTCAAGCACCTCTCATCGTATCCACCAACACATCTTT                                                                                                                            ]
[+] EMBL CNS093PW             [                                                                                                                                                                                                                                                        CGACGGCGACACATCACAACAGTTAAACAAGCAACTCGTTGACAAAGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGCGGTTCCGGTGGT      GGT   GGTGGTGG   CCAGCCGGG CGGTGGT       GCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAG CAGACAGGGGAACCGGAAAGAAGGGTGGTAAAAAGTGATGGGATGGATTTCCTCGGACAGCAGCTCACCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTCGAATTGTGATTTGGACTGTGAACAAAAAAATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCGCAA CCCTCGTACGCGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAG                                                                                                                                                                                                                                                 ]
[+] EMBL BM635651             [                                                                                                                                                                                                                                                     ccgCGACGGATACACATCACCACAGTTAAACAAGCAACTCGTTGACAAAGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGCGGTTCCGGTGGT      GGT   GGTGGTGG   CCAGCCGGG CGGTGGTAAAAAAGGCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAG CAGACAAGGGAACCGGAAAGAAGGGTGGTAAAAAGTGATGGGATGGATTTCCTCGGACAGCAGCTCACCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTTGAATTGTGATTTGGACTGTGAACATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCGCAAGCACTCGTACGCGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAAACCAATCCGCTGCTGTAGTATTTTTCCATCTCTTTCGCTATTCAACCACCTCTCATCGTATCTACCAACACATCTTTCACTA GACGACGACAAGAGCA CCTTCTCTATCTATGGGTAAGATTTGGTTTATATTATTTTTCCTCGCAAGTGAAT                                              ]
[+] EMBL BM656715             [                                                                                                                                                                                                                                                             ccgACACATCACCACAGTTAAACAAGCAACTCGTTGACAAAGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGCGGTTCCGGTGGT      GGT   GGTGGTGG   CCAGCCGGG CGGTGGTAAAAAAGGCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAG CAGACAAGGGAACCGGAAAGAAGGGTGGTAAAAAGTGATGGGATGGATTTCCTCGGACAGCAGCTCACCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTTGAATTGTGATTTGGACTGTGAACATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCGCAAGCACTCGTACGCGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAAACCAATCCGCTGCTGTAGTATTTTTCCATCTCTTTCGCTATTCAACCACCTCTCATCGTATCCACCAACACATC                                                                                                                               ]
[+] EMBL BM600402             [                                                                                                                                                                                                                                                                ccgCATCACCACAGTTAAACAAGCAACTCGTTGACAAAGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGCGGTTCCGGTGGT      GGT   GGTTGTGG   CCAGCCGGG CGGTGGTAAAAAAGGCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAG CAGACAAGGGAGCCGGAAAGAAGGGTGGTAAAAAGTGATGGAATGGATTTCCTCGGACAGCAGCTCATCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTTGAATTGTGATTTGGACTGTGAACATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCGCAAGCACTCGTACGCGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAAACCAATCCGCTGCTGTAGTATTTTTCCATCTCTTTCGCTATTCAACCACCTCTCATCGTATCCACCAACACATCTTTCACTA GACGACGACAAGAGCA CCTTCTCTATCTATGGTTAAGATTTGTTTTATATTA TTTTCCTCGCAAGTGAATATACATTTAAAAGCTTTCAATGGAAATA                  ]
[+] EMBL BX610489             [                                                                                                                                                                                                                                                                   CATCACCACAGTTAAACAAGCAACTCGTTGACAAAGTTTAGTAGTTCTCCTTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGCGGTTCCGGTGGT      GGT   GGTTGTGG   CCAGCCGGG CGGTGGT       GCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAG CAGACAAGGGAGTCGGAAAGAAGGGTGGTAAAAAGTGATGGAATGGATTTCCTCGGACAGCAGCTCATCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTTGAATTGTGATTTGGACTGTGAACATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCGCAAGCACTCGTACGCGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCA                                                                                                                                                                                                                                ]
[+] EMBL BM635092             [                                                                                                                                                                                                                                                                                ccgCAAGCAACTCGTTGACAAAGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGCGGTTCCGGTGGT      GGT   GGTGGTGG   CCAGCCGGG CGGTGGTAAAAAAGGCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAG CAGACAAGGGAACCGGAAAGAAGGGTGGTAAAAAGTGATGGGATGGATTTCCTCGGACAGCAGCTCACCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTTGAATTGTGATTTGGACTGTGAACATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCGCAAGCACTCGTACGCGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAAACCAATCCGCTGCTGTAGTATTTTTCCATCTCTTTCGCTATTCAACCACCTCTCATCGTATCCACCAACACATCTTTCACTA GACGACGACAAGAGCACCCTTCTCTATCTATGGGTAAGATTTGTTTTATATTA TTTTCCTCGCAAGTGAATA                                             ]
[+] EMBL BX610490             [                                                                                                                                                                                                                                                                                      GCAACTCGTTGACAAAGTTTAGTAGTTCTCCTTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGCGGTTCCGGTGGT      GGT   GGTTGTGG   CCAGCCGGG CGGTGGT       GCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAG CAGACAAGGGAGTCGGAAAGAAGGGTGGTAAAAAGTGATGGAATGGATTTCCTCGGACAGCAGCTCATCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTTGAATTGTGATTTGGACTGTGAACATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCGCA                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CNS093PX             [                                                                                                                                                                                                                                                                                         ACTCGTTGACAAAGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGCGGTTCCGGTGGT      GGT   GGTGGTGG   CCAGCCGGG CGGTGGT       GCCCTGCAGGTGGT GCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAG CAGACAGGGGAACCGGAAAGAAGGGTGGTAAAAAGTGATGGGATGGATTTCCTCGGACAGCAGCTCACCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATT                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM625319             [                                                                                                                                                                                                                                                                                                        ccgGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGCGGTTCCGGTGGT      GGT   GGTTGTGG   CCAGCCGGG CGGTGGTAAAAAAGGCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAGCCAGACAAGGGAGCCGGAAAGAAGGGTGGTAAAAAGTGATGGAATGGATTTCCTCGGACAGCAGCTCATCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTTGAATTGTGATTTGGACTGTGAACATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCGCAAGCACTCGTACGCGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAAACCAATCCGCTGCTGTAGTATTTTTCCATCTCTTTCGCTATTCAACCACCTCTCATCGTATCCACCAACACATCTTTCACTA GACGACGACAAGAGCA CCTTCTCTATCTATGGTTAAGATTTGTTTTATATTA TTTTCCTCGCAAGTGAATATAC                                          ]
[-] EMBL BM581831             [                                                                                                                                                                                                                                                                                                                                           ATGGGTAAAGGCAAGGGTGGTGGTTCCGGTGGT      GGTGCCGGTGGTGGTGCCCACCCGGGCCGGTGGT       GCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAG CAGACAAGGGAGCCGGAAAGAAGGGTGGTAAAAAGTGATGGGATGGATTTCCTCGGACAGCAGCTCACCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTCGAATTGTGATTTGGACTGTGCTCATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCTCAAGCACTCGTACGCGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAAACCAATCCGCTGCTGTAGTATTTTTCCATCTCTTTCGCTATTCAACCACCTCTCATCGTATCCACC GCACATCTTTCACTAGGACGACGACAAGAGCA CCTTCTCTATCTATGGTTAAGATTTGTTTTATATTA TTTTCCTCGCAAGTGAATATACATTTAAAAGCTTTCAATGGAAATAAAAGAAACAAGCTATTCA]
[+] EMBL BM613012             [                                                                                                                                                                                                                                                                                                                                                                                                                 ccgAAAAAAGGCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAG CAGACAAGGGAGCCGGAAAGAAGGGTGGTAAAAAGTGATGGAATGGATTTCCTCGGACAGCAGCTCATCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTTGAATTGTGATTTGGACTGTGAACATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCGCAAGCACTCGTACGCGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAAACCAATCCGCTGCTGTAGTATTTTTCCATCTCTTTCGCTATTCAACCACCTCTCATCGTATCCACCAACACATCTTTCACTA GACGACGACAAGAGCA CCTTCTCTATCTATGGTTAAGATTTGTTTTATATTA TTTTCCTCGCAAGTGAATATACATTTAAA                                   ]
[+] EMBL BM641380             [                                                                                                                                                                                                                                                                                                                                                                                                                                        ccGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAG CAGACAAGGGAACCGGAAAGAAGGGTGGTAAAAAGTGATGGGATGGATTTCCTCGGACAGCAGCTCACCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTTGAATTGTGATTTGGACTGTGAACATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGTTTTTTCCTGCGTGGCGCAAGCACTCGTACGCGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAAACCAATCCGCTGCTGTAGTATTTTTCCATCTCTTTCGCTATTCAACCACCTCTCATCGTATCCACCAACACATCTTTCACTA GACGACGACAAGAGCA CCTTCTCTATCTATGGTTAAGATTTGTTTTATATTA TTTTCCTCGCAAGTGAATATACATTTAAAAG                                 ]
[+] EMBL BM605680             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ccgGCAGCTCACCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTTGAATTGTGATTTGGACTGTGAACATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCGCAAGCACTCGTACGCGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAAACCAATCCGCTGCTGTAGTATTTTTCCATCTCTTTCGCTATTCAACCACCTCTCATCGTATCCACCAACACATCTTTCACTA GACGACGACAAGAGCA CCTTCTCTATCTATGGTTAAGATTTGTTTTATATTA TTTTCCTCGCAAGTGAATATACATTTAAAAGCTTTCAA                          ]


>consensus_10171#0 CCGGAGAGGATACGGGATTAAGATCATCCACCGTACCCCGTGTATGGGACGGTTGTCTAT TTTTACATAAACGGCGCAAGACCGGTTAAGCAGCGTCTTCTCTGAGGGATGACGACTTGA TATTGTTTGGTTGGATGGATTGGTGGTTGGCACATATCCCCACCACAAAATCGTTCGTTG CGTCGGTCCGGAAATGGCCAGCCGGACCGTAGGAACGCCAACCGATCGGGCAGTTGAGTC GCATCCTTCGACGGATACACATCACCACAGTTAAACAAGCAACTCGTTGACAAAGTTTAG TAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGCGGTTCCGG TGGTGGTGGTGGTGGCCAGCCGGGCGGTGGTAAAAAAGGCCCTGCAGGTGGTGGCGCCGC CAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAGCAGACAAGGGAGCCGG AAAGAAGGGTGGTAAAAAGTGATGGGATGGATTTCCTCGGACAGCAGCTCACCCCGACCT ACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGA ATTTGAATTGTGATTTGGACTGTGAACATTATTATTCAAGCGTTTACCGATGTATTTATT GTTGGCTTTTTCCTGCGTGGCGCAAGCACTCGTACGCGGGGTTTGTGCTTCGAAACGGAA CAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTA CTCAATAGACACGAAACCAATCCGCTGCTGTAGTATTTTTCCATCTCTTTCGCTATTCAA CCACCTCTCATCGTATCCACCAACACATCTTTCACTAGACGACGACAAGAGCACCTTCTC TATCTATGGTTAAGATTTGTTTTATATTATTTTCCTCGCAAGTGAATATACATTTAAAAG CTTTCAATGGAAATAAAAGAAACAAGCTATTCA



consensusID : consensus_10171#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 705
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCG-ATCCTTCGACGGATACACATCACA-AACGTTAAACAAGCAAC-TCGTTGACAAAGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGTGGTTCCGGTGGTGGTGGCGGTGGTGGTGGCCAGCCGGGCGGTGGT-AAAAAAGGCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAGCAGACAAGGGAGCCGGAAAGAAGGGTGGTAAAAAGTGATGGGATGGATTTCCTCGGACAGCAGCTCACCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTCGAATTGTGATTTGGACTGTGCTCATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCTCAAGCACTCGT-ACG-CGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAAACCAATCCGCTGCTGTAGTATTTTTCCATCTCTTTCGCTATTCAACCACCTCTCATCGTATCCACCGCACATCTTTCACTAGGACGACGACAAGA]

[+] EMBL BM597308             [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCATCCTTCGACGGATACACATCACA AACGTTAAACAAGCAAC TCGTTGACAAAGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGTGGTTCCGGTGGTGGTGGCGGTGGTGGTGGCCAGCCGGGCGGTGGT AAAAAAGGCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAGCAGACAAGGGAGCCGGAAAGAAGGGTGGTAAAAAGTGATGGGATGGATTTCCTCGGACAGCAGCTCACCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTCGAATTGTGATTTGGACTGTGCTCATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCTCAAGCACTCGTAACGCCGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAAACCAATCCGCTGCTGTAGT                                                                            ]
[+] EMBL BM598234             [                                    CCGCCCACGCGTCCG   CCTTCGACGGATACACATCACA AACGTTAAACAAGCAAC TCGTTGACAAAGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGTGGTTCCGGTGGTGGTGGCGGTGGTGGTGGCCAGCCGGGCGGTGGT AAAAAAGGCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAGCAGACAAGGGAGCCGGAAAGAAGGGTGGTAAAAAGTGATGGGATGGATTTCCTCGGACAGCAGCTCACCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTCGAATTGTGATTTGGACTGTGCTCATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCTCAAGCACTCGT ACG CGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAAACCAATCCGCTGCTGT                                                                               ]
[+] EMBL BM615155             [                                    CCGCCCACGCGTCCG ATCCTTCGACGGATACACATCACA AACGTTAAACAAGCAAC TCGTTGACAAAGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGTGGTTCCGGTGGTGGTGGCGGTGGTGGTGGCCAGCCGGGCGGTGGT AAAAAAGGCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAGCAGACAAGGGAGCCGGAAAGAAGGGTGGTAAAAAGTGATGGGATGGATTTCCTCGGACAGCAGCTCACCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTCGAATTGTGATTTGGACTGTGCTCATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCTCAAGCACTCGT ACG CGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAAACCAATCCGCTGCTGTAGTATTTTTCCATCTCTTTCGCTATTCAACCACCTCTCATCGTATACACCGCACATCTTT                   ]
[+] EMBL AGAA13316            [                                           CGCGTCCG ATCCTTCGACGGATACACATCACA AACGTTAAACAAGCAAC TCGTTGACAAAGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCAT GGTAAAGGCAAGGGTGGTGGTTCCGGTGGTGGTGGCGGTGGTGGTGGCCAGCCGGGCGTGGGTAAAAAAAGGCCCTGCAGGTaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AL932718             [                                         gaatCGCCCG A GGTTAGACGGATACACATCACA AACGTT AACAAGCAAC TCGTCGACAAGGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGTGGTTCCGGTGGTGGTGGCGGTGGTGGTGGCCAGCCGGGCGGTGGT AAAAAAGGCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACGCTAAAGGTGGTGCTGGCGGTAAAGCAGCAGACAAGGGAACCGGAAAGAAGGGTGGTAAAAAGTGATGGAATGGATTTCCTCGGACAGCAGCTCACCCCGACCTACTTCCGGAGGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTCGAATTGTGATTTGGACTGTGAACATTATTATT                                                                                                                                                                                                                                                                ]
[+] EMBL BM604456             [                                                CCGCATCCTTCGACGGATACACATCACA AACGTTAAACAAGCAAC TCGTTGACAAAGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGTGGTTCCGGTGGTGGTGGCGGTGGTGGTGGCCAGCCGGGCGGTGGT AAAAAAGGCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAGCAGACAAGGGAGCCGGAAAGAAGGGTGGTAAAAAGTGATGGGATGGATTTCCTCGGACAGCAGCTCACCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTCGAATTGTGATTTGGACTGTGCTCATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCTCAAGCACTCGT ACG CGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAAACCAATCCGCTGCTGTAGTATTTTTCCATCTCTTTCGCTATTCAACCACCTCTCATCGTATCCACCGCACATCTTTCACTAGGACGACGACAAGA]
[+] EMBL BM586082             [                                                      CCGTCGACGGATACACATCACA AACGTTAAACAAGCAAC TCGTTGACAAAGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGTGGTTCCGGTGGTGGTGGCGGTGGTGGTGGCCAGCCGGGCGGTGGT AAAAAAGGCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAGCAGACAAGGGAGCCGGAAAGAAGGGTGGTAAAAAGTGATGGGATGGATTTCCTCGGACAGCAGCTCACCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTCGAATTGTGATTTGGACTGTGCTCATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCTCAAGCACTCGT ACG CGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAAACCAATCCGCTGCTGTAGTATTTTTCCATCTCTTTCGCTATTCAACCACCTCTCATCGTATCCACCGCACAT                       ]
[+] EMBL BM618760             [                                                       ccgCGACGGATACACATCACA AACGTTAAACAAGCAAC TCGTTGACAAAGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGTGGTTCCGGTGGTGGTGGCGGTGGTGGTGGCCAGCCGGGCGGTGGT AAAAAAGGCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAGCAGACAAGGGAGCCGGAAAGAAGGGTGGTAAAAAGTGATGGGATGGATTTCCTCGGACAGCAGCTCACCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTCGAATTGTGATTTGGACTGTGCTCATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCTCAAGCACTCGT ACG CGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAAACCAATCCGCTGCTGTAGTATTTTTCCATCTCCTTCGCTATTCAACCACCTCTCATCGTATCCACCGCACAT                       ]
[+] EMBL BX619983             [                                                             gtGATACACATCACATAACGTTAAACAAGCAACATCGTCGACAAGGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGTGGTTCCGGTGGTGGTGGCGGTGGTGGTGGCCAGCCGGGCGGTGGT AAAAAAGGCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACGCTAAAGGTGGTGCTGGCGGTAAAGCAGCAGACAAGGGAACCGGAAAGAAGGGTGGTAAAAAGTGATGGAATGGATTTCCTCGGACAGCAGCTCACCCCGACCTACTTCCGGAGGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATNCGANNNGTGATTTGGACTGTGAACATNATTATTCAAGCGTTTACCGATGTATNTATTGTTGGCTTTTTCCTGCGTGGCGCNAGCACTCGT ACG CNGGGTTTGTGCTTCGAAACGGAACAAAACAAC                                                                                                                                                                 ]
[+] EMBL BM599257             [                                                                    ccgTCACA AACGTTAAACAAGCAAC TCGTTGACAAAGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGTGGTTCCGGTGGTGGTGGCGGTGGTGGTGGCCAGCCGGGCGGTGGT AAAAAAGGCCCTGCAGGTGGTGGCGCCGCCAAGGGTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAGCAGACAAGGGAGCCGGAAAGAAGGGTGGTAAAAAGTGATGGGATGGATTTCCTCGGACAGCAGCTCACCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTCGAATTGTGATTTGGACTGTGCTCATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTTCCTGCGTGGCTCAAGCACTCGT ACG CGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAAACCAATCCGCTGCTGTAGTATTTTTCCATCTCTTTCGCTATTCAACCACCTCTCATCGTATCCACCGCACA                        ]


>consensus_10171#1 CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGATCCTTCGA CGGATACACATCACAAACGTTAAACAAGCAACTCGTTGACAAAGTTTAGTAGTTCTCCGT GTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGTGGTTCCGGTGGTGGTGGCG GTGGTGGTGGCCAGCCGGGCGGTGGTAAAAAAGGCCCTGCAGGTGGTGGCGCCGCCAAGG GTGGAAATGACACTAAAGGTGGTGCTGGCGGTAAAGCAGCAGACAAGGGAGCCGGAAAGA AGGGTGGTAAAAAGTGATGGGATGGATTTCCTCGGACAGCAGCTCACCCCGACCTACTTC CGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAGCCCCTTACGAATTCG AATTGTGATTTGGACTGTGCTCATTATTATTCAAGCGTTTACCGATGTATTTATTGTTGG CTTTTTCCTGCGTGGCTCAAGCACTCGTACGCGGGGTTTGTGCTTCGAAACGGAACAAAA CAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAA TAGACACGAAACCAATCCGCTGCTGTAGTATTTTTCCATCTCTTTCGCTATTCAACCACC TCTCATCGTATCCACCGCACATCTTTCACTAGGACGACGACAAGA



consensusID : consensus_10171#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 507
fasta sequence
                              [ATGCCGAGGTTAACAAGCACTCGTCGACAAGGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGTGGTTCCGGTGTGTGGTGGCGGTGGTGGTGGCCAGCCGGGCGGTGGTAAAAAAGGCCCTGCAGGTGGTGGCTGCCTGCCAAGGGTGGAAATGACGCTAAAGGTGTGTGCTGGCGGTAAAGCAGCAGACAAGGGAACCGTACCTGCACCATCAGCCTGCCACCGCATCCACCTGCCGCACCATATGCCTCCGCACATGCAGCCCCACCCTGGTATGCCCTGGCCACTGGACCCTCGTTCCCGGGCTATCCGCATGCCGGTTCGCCACGCGCACCGTACTACCTTTCCTCGTACGGGGGGCACCCGCAACCGTACGGCCAGTACGGACACTATCCGTACCATCAGCAGTATGCACCGCACCACCAACCCCGGGCAGCTACGTCCGCCACCGGGCGGACCANCAGGGCCGATGGGACACTAC]

[+] EMBL AL932485             [ATGCCGAGGTTAACAAGCACTCGTCGACAAGGTTTAGTAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGTGGTTCCGGTGTGTGGTGGCGGTGGTGGTGGCCAGCCGGGCGGTGGTAAAAAAGGCCCTGCAGGTGGTGGCTGCCTGCCAAGGGTGGAAATGACGCTAAAGGTGTGTGCTGGCGGTAAAGCAGCAGACAAGGGAACCGTACCTGCACCATCAGCCTGCCACCGCATCCACCTGCCGCACCATATGCCTCCGCACATGCAGCCCCACCCTGGTATGCCCTGGCCACTGGACCCTCGTTCCCGGGCTATCCGCATGCCGGTTCGCCACGCGCACCGTACTACCTTTCCTCGTACGGGGGGCACCCGCAACCGTACGGCCAGTACGGACACTATCCGTACCATCAGCAGTATGCACCGCACCACCAACCCCGGGCAGCTACGTCCGCCACCGGGCGGACCANCAGGGCCGATGGGACACTAC]


>consensus_10171#2 ATGCCGAGGTTAACAAGCACTCGTCGACAAGGTTTAGTAGTTCTCCGTGTTCTTCGTTAA GATCCAGCATGGGTAAAGGCAAGGGTGGTGGTTCCGGTGTGTGGTGGCGGTGGTGGTGGC CAGCCGGGCGGTGGTAAAAAAGGCCCTGCAGGTGGTGGCTGCCTGCCAAGGGTGGAAATG ACGCTAAAGGTGTGTGCTGGCGGTAAAGCAGCAGACAAGGGAACCGTACCTGCACCATCA GCCTGCCACCGCATCCACCTGCCGCACCATATGCCTCCGCACATGCAGCCCCACCCTGGT ATGCCCTGGCCACTGGACCCTCGTTCCCGGGCTATCCGCATGCCGGTTCGCCACGCGCAC CGTACTACCTTTCCTCGTACGGGGGGCACCCGCAACCGTACGGCCAGTACGGACACTATC CGTACCATCAGCAGTATGCACCGCACCACCAACCCCGGGCAGCTACGTCCGCCACCGGGC GGACCANCAGGGCCGATGGGACACTAC



consensusID : consensus_10171#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 225
fasta sequence
                              [TTTTTTTTTTTTTTTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTCCTGCGTGGCGCAAGCACTCGTACGCGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAACCAATCCGCTGCTGTGTATTTTTCCATCTCTTTCGCTATTMAACCA]

[+] EMBL AGA281679            [TTTTTTTTTTTTTTTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTCCTGCGTGGCGCAAGCACTCGTACGCGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAACCAATCCGCTGCTGTGTATTTTTCCATCTCTTTCGCTATTMAACCA]


>consensus_10171#3 TTTTTTTTTTTTTTTATTATTCAAGCGTTTACCGATGTATTTATTGTTGGCTTTTCCTGC GTGGCGCAAGCACTCGTACGCGGGGTTTGTGCTTCGAAACGGAACAAAACAACTACAAAA GACAAACTAAGCAAACTAGCACGCTAGCTAAACTCAAACCAGTACTCAATAGACACGAAC CAATCCGCTGCTGTGTATTTTTCCATCTCTTTCGCTATTMAACCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10171#0      CCGGAGAGGATACGGGATTAAGATCATCCACCGTACCCCGTGTATGGGACGGTTGTCTAT 60
consensus_10171#3      ------------------------------------------------------------
consensus_10171#1      ------------------------------------------------------------
consensus_10171#2      ------------------------------------------------------------
                                                                                   

consensus_10171#0      TTTTACATAAACGGCGCAAGACCGGTTAAGCAGCGTCTTCTCTGAGGGATGACGACTTGA 120
consensus_10171#3      ------------------------------------------------------------
consensus_10171#1      ------------------------------------------------------------
consensus_10171#2      ------------------------------------------------------------
                                                                                   

consensus_10171#0      TATTGTTTGGTTGGATGGATTGGTGGTTGGCACATATCCCCACCACAAAATCGTTCGTTG 180
consensus_10171#3      ------------------------------------------------------------
consensus_10171#1      ------------------------------------------------------------
consensus_10171#2      ------------------------------------------------------------
                                                                                   

consensus_10171#0      CGTCGGTCCGGAAATGGCCAGCCGGACCGTAGGAACGCCAACCGATCGGGCAGTTGAGTC 240
consensus_10171#3      ------------------------------------------------------------
consensus_10171#1      ----------CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCAC-GCGTC 49
consensus_10171#2      ------------------------------------------------------------
                                                                                   

consensus_10171#0      GCATCCTTCGACGGATACACATCACCACAGTTAAACAAGCAACTCGTTGACAAAGTTTAG 300
consensus_10171#3      ------------------------------------------------------------
consensus_10171#1      CGATCCTTCGACGGATACACATCACAAACGTTAAACAAGCAACTCGTTGACAAAGTTTAG 109
consensus_10171#2      -----------------------ATGCCGAGGTTAACAAGCACTCGTCGACAAGGTTTAG 37
                                                                                   

consensus_10171#0      TAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGCGGTTCCGG 360
consensus_10171#3      ------------------------------------------------------------
consensus_10171#1      TAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGTGGTTCCGG 169
consensus_10171#2      TAGTTCTCCGTGTTCTTCGTTAAGATCCAGCATGGGTAAAGGCAAGGGTGGTGGTTCCGG 97
                                                                                   

consensus_10171#0      TG-GTGGTGG------TGGTGGCCAGCCGGGCGGTGGTAAAAAAGGCCCTGCAGGTGGTG 413
consensus_10171#3      ------------------------------------------------------------
consensus_10171#1      TG-GTGGTGGCGGTGGTGGTGGCCAGCCGGGCGGTGGTAAAAAAGGCCCTGCAGGTGGTG 228
consensus_10171#2      TGTGTGGTGGCGGTGGTGGTGGCCAGCCGGGCGGTGGTAAAAAAGGCCCTGCAGGTGGTG 157
                                                                                   

consensus_10171#0      GCG--CCGCCAAGGGTGGAAATGACACTAAAGGTG-GTGCTGGCGGTAAAGCAGCAGACA 470
consensus_10171#3      ------------------------------------------------------------
consensus_10171#1      GCG--CCGCCAAGGGTGGAAATGACACTAAAGGTG-GTGCTGGCGGTAAAGCAGCAGACA 285
consensus_10171#2      GCTGCCTGCCAAGGGTGGAAATGACGCTAAAGGTGTGTGCTGGCGGTAAAGCAGCAGACA 217
                                                                                   

consensus_10171#0      AGGGAGCCGGAAAGAAGGGTGGTAAAAAGTGATGGGATGGATTTCCTCGGACAGCAGCTC 530
consensus_10171#3      ------------------------------------------------------------
consensus_10171#1      AGGGAGCCGGAAAGAAGGGTGGTAAAAAGTGATGGGATGGATTTCCTCGGACAGCAGCTC 345
consensus_10171#2      AGGGAACCGTA-------------------------------------------CCTGCA 234
                                                                                   

consensus_10171#0      ACCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAG 590
consensus_10171#3      ------------------------------------------------------------
consensus_10171#1      ACCCCGACCTACTTCCGGAAGCGATAACAGCAGCGGATTCGGCCGGCCAGCGAAAGGGAG 405
consensus_10171#2      CCATCAGCCTGCCACCGCATCCACCTGCCGCACCATATGCCTCCGCACATGCAGCCCCAC 294
                                                                                   

consensus_10171#0      CCCCTTACGAATTTGAATTGTGATTTGGACTGTGAACATTATTATTCAAGCGTTTACCGA 650
consensus_10171#3      -------------------------TTTTTTTTTTTTTTTATTATTCAAGCGTTTACCGA 35
consensus_10171#1      CCCCTTACGAATTCGAATTGTGATTTGGACTGTGCTCATTATTATTCAAGCGTTTACCGA 465
consensus_10171#2      CCTGGTATGC-CCTGGCCACTGGACCCTCGTTCCCGGGCTATCCGCATGCCGGTTCGCCA 353
                                                     *        ***        ** **  * *

consensus_10171#0      TGTATTTATTGTTGGCTTTTTCCTGCGTGGCGCAAGCACTCGTACGCGGGGTTTGTGCTT 710
consensus_10171#3      TGTATTTATTGTTGGCTTTT-CCTGCGTGGCGCAAGCACTCGTACGCGGGGTTTGTGCTT 94
consensus_10171#1      TGTATTTATTGTTGGCTTTTTCCTGCGTGGCTCAAGCACTCGTACGCGGGGTTTGTGCTT 525
consensus_10171#2      CGCGCACCGTACTACCTTTC-CTCGTACGGGGGGCACCCGCAACCGTACGGCCAGTACG- 411
                        *       *  *  ****  *  *   **      * * *   **   **   ** *  

consensus_10171#0      CGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACT 770
consensus_10171#3      CGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACT 154
consensus_10171#1      CGAAACGGAACAAAACAACTACAAAAGACAAACTAAGCAAACTAGCACGCTAGCTAAACT 585
consensus_10171#2      -GACACTATCCGTACCATCAGCAGTATGCAC------CGCACCACCAACCCCGGGCAGCT 464
                        ** **    *  * ** *  **  *  **       *  ** * **  *  *   * **

consensus_10171#0      CAAACCAGTACTCAATAGAC--ACGAAACCAATCCGCTGCTGTAGTATTTTTCCATCTCT 828
consensus_10171#3      CAAACCAGTACTCAATAGAC--ACGAA-CCAATCCGCTGCTGT-GTATTTTTCCATCTCT 210
consensus_10171#1      CAAACCAGTACTCAATAGAC--ACGAAACCAATCCGCTGCTGTAGTATTTTTCCATCTCT 643
consensus_10171#2      ACGTCCGCCACCGGGCGGACCANCAGGGCCGATGGGACACTAC----------------- 507
                           **   **      ***   *    ** **  *   **                   

consensus_10171#0      TTCGCTATTCAACCACCTCTCATCGTATCCACCAACACATCTTTCACTAGACGACGACAA 888
consensus_10171#3      TTCGCTATTMAACCA--------------------------------------------- 225
consensus_10171#1      TTCGCTATTCAACCACCTCTCATCGTATCCACCGCACATCTTTCACTAGGACGACGACAA 703
consensus_10171#2      ------------------------------------------------------------
                                                                                   

consensus_10171#0      GAGCACCTTCTCTATCTATGGTTAAGATTTGTTTTATATTATTTTCCTCGCAAGTGAATA 948
consensus_10171#3      ------------------------------------------------------------
consensus_10171#1      GA---------------------------------------------------------- 705
consensus_10171#2      ------------------------------------------------------------
                                                                                   

consensus_10171#0      TACATTTAAAAGCTTTCAATGGAAATAAAAGAAACAAGCTATTCA 993
consensus_10171#3      ---------------------------------------------
consensus_10171#1      ---------------------------------------------
consensus_10171#2      ---------------------------------------------
                                                                    




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)