These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10259#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 549 fasta sequence [CCGGTGCATCGAAGCAAGCCCCGCTGAAGCCGCTCTTCGGTTGCTAGGACACCGATGCCCTTTTTCTTCCCACTCGCTGACAGTTGAAGGAGAGTCGGTGCATTTTGATCCATTTCATCGGCAGCCGTTACCGTACGTTGCAAGGAGCAAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAA--AAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT--GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCAC] [+] EMBL BM582153 [CCGGTGCATCGAAGCAAGCCCCGCTGAAGCCGCTCTTCGGTTGCTAGGACACCGATGCCCTTTTTCTTCCCACTCGCTGACAGTTGAAGGAGAGTCGGTGCATTTTGATCCATTTCATCGGCAACCGTTACCGTACGTTGCAAGGAGCTAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGTCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTC ] [+] EMBL BM648331 [ ccGCATCGAAGCAAGCCCCGCTGAAGCCGCTCTTCGGTTGCTAGGACACCGATGCCCTTTTTCTTCCCACTCGCTGACAGTTGAAGGAGAGTCGGTGCATTTTGATCCATTTCATCGGCAACCGTTACCGTACGTTGCAAGGAGCAAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTC ] [+] EMBL BM652579 [ ccgCTTTTTCTTCCCACTCGCTGACAGTTGAAGGAGAGTCGGTGCATTTTGATCCATTTCATCGGCAGCCGTTACCGTACGTTGCAAGGAGCAAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCATTATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCTGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAAAAGAAGGCATAAGCAACAGCAA AAAAACAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGC ] [+] EMBL BM626516 [ ccgGGAGAGTCGGTGCATTTTGATCCATTTCATCGGCAGCCGTTACCGTACGTTGCAAGGAGCAAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCATTATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAAAAGAAGGCATAAGCAACAGCAA AAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGC ] [+] EMBL BM635306 [ ccgGGAGAGTCGGTGCATTTTGATCCATTTCATCGGCAGCCGTTACCGTACGTTGCAAGGAGCAAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCATTATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAAAAGAAGGCATAAGCAACAGCAA AAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCAC] [+] EMBL BM637186 [ ATTTCATCGGCAGCCGTTACCGTACGTTGCAAGGAGCAAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAAAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCCGCCTGCTCGGCATCCTCAAGCTGGTGTACGATCTTGGATTCGCCCAGAAGAAGGCATAAGCAAAAGC AAAAAACGAAGCAGGCTGGGGAGGTCG GGCGTACGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAA ] [+] EMBL BM630981 [ ccgCGTTACCGTACGTTGCAAGGAGCAAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTTGGATTCGCCAAGAAGAAGGCATAAGCAAAAGC AAAAAACGAAGCAGGCTGGGGAGGTCG GGCGTACGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTC ] [+] EMBL BM644515 [ ccgGGAGCAAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTTGGATTCGCCAAGAAGAAGGCATAAGCAAAAGC AAAAAACGAAGCAGGCTGGGGAGGTCG GGCGTACGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTT ] consensusID : consensus_10259#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 510 fasta sequence [CCGCCCACGCGTCCGAAAAGTTGGCACAAAAATGGCCCCTGCAACGACGCGTGTTGCATAATTTTTCCCTCTCGTAGTGAAAAACTACATCCCGTTTCACCGTTTTGTGTGTGTGTTTGTTTGTTGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTTGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAAAAACGAAGCAGGCTGGGGAGGTCGGGCGTACGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCAAAAAATACTACTACTGAAT] [+] EMBL BM637229 [CCGCCCACGCGTCCGAAAAGTTGGCACAAAAATGGCCCCTGCAACGACGCGTGTTGCATAATTTTTCCCTCTCGTAGTGAAAAACTACATCCCGTTTCACCGTTTTGTGTGTGTGTTTGTTTGTTGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTTGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAAAAACGAAGCAGGCTGGGGAGGTCGGGCGTACGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCAAAAAATACTACTACTGAAT] consensusID : consensus_10259#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 476 fasta sequence [CCGCCCACGCGTCCG-CGTTACCGTACGTTGCAAGGAGCAAG---TTTGATCGTTTCGTCCGCAGAC-TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT--GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCAAAACCCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL BM644891 [CCGCCCACGCGTCCG GTTACCGTACGTTGCAACGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAAAAAAAAAACGAAGCAGGCTGCGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTC ] [+] EMBL BM645325 [CCGCCCACGCGTCCGCCGTTACCGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCG ] [+] EMBL BM624440 [CCGCCCACGCGTCCG CGTTACCGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTTGGATTCGCCAAGAAGAAGGCATAAGCAAAAGC AAAAAACGAAGCAGGCTGGGGAGGTCG GGCGTACGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTC ] [+] EMBL BM596780 [CCGCCCACGCGTCCG GTTACCGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCATTATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAAAAGAAGGCATAAGCAACAGCAAA AAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGG ] [+] EMBL BM599477 [CCGCCCACGCGTCCG CGTTACCGTACGTTGCAAGGAGCAAGTTATTTGATCGTTTCGTCCGCAGACTTCACGCAGATCAAAAGCAGTAA ] [+] EMBL BM603825 [ ACGCGTCCG GTTACCGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTTGGATTCCCCAAGAAGAAGGCATAAGCAAAAGC AAAAAACGAAGCAGGCTGGGGAGGTCG GGCGTACGTGTAGTGGTGTGTTTGGAGCAAAGATGGAAAAACCGGGC ] [+] EMBL BM603490 [ cCGCGGACG CG TGGGGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCATTATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAAAAGAAGGCATAAGCAACAGCAAA AAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAAC ] [+] EMBL BM619924 [ CCG CGTTACCGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTC ] [+] EMBL BM631769 [ CCG CGTTACCGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTC ] [+] EMBL BM638327 [ CCG CGTTACCGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCAAAACCCTG ] [+] EMBL BM619443 [ CCGCCGTTACCGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGC ] [+] EMBL BM624082 [ CCG CGTTACCGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCg ] [+] EMBL BM640409 [ CCG CGTTACCGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTC ] [+] EMBL BM629058 [ ccgcaac CGTTACCGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGG ] [+] EMBL BM585174 [ ccgGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGTAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTC ] [+] EMBL BM591400 [ ccGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCg ] [+] EMBL BM636445 [ ccgGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTgcg ] [+] EMBL BX608745 [ TGATCGCTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAA AAAAAAACGAAGCAGGCTGCGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCAAAACCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_10259#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 418 fasta sequence [CCGCCCACGCGTCCGGCAAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCATTATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAAAAGAAGGCATAAGCAACAGCAAAAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGTGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCCG] [+] EMBL BM633154 [CCGCCCACGCGTCCGGCAAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCATTATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAAAAGAAGGCATAAGCAACAGCAAAAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGTGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCCG] [+] EMBL BM649063 [ gaCCCACGCGTCCG AAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCATTATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAAAAGAAGGCATAAGCAACAGCAAAAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGTGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATA ] [+] EMBL BM589729 [ ccgGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCATTATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGTCGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAAAAGAAGGCATAAGCAACAGC AAAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGTGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTC ] consensusID : consensus_10259#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 383 fasta sequence [CCGCCCACGCGTCCGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGTGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCAAAACCCAG] [+] EMBL BM645700 [CCGCCCACGCGTCCGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGTGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCAAAACCCAG] consensusID : consensus_10259#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 352 fasta sequence [CAAGGAGCAAAGGAAAGTCAAACGAAACAGTTTGATCGCTTCGTCACGCAGACTCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCNTGTTCGGCATCNACGGTCGCGCTGTGCGGTGTCGGCCTGCTCCGGNCATCGTCAAGCTGGTGTACGATCTCNGATTCGC] [+] EMBL BX619367 [CAAGGAGCAAAGGAAAGTCAAACGAAACAGTTTGATCGCTTCGTCACGCAGACTCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCNTGTTCGGCATCNACGGTCGCGCTGTGCGGTGTCGGCCTGCTCCGGNCATCGTCAAGCTGGTGTACGATCTCNGATTCGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10259#1 ------------------------------------------------------------ consensus_10259#4 ------------------------------------------------------------ consensus_10259#2 ------------------------------------------------------------ consensus_10259#3 ------------------------------------------------------------ consensus_10259#0 CCGGTGCATCGAAGCAAGCCCCGCTGAAGCCGCTCTTCGGTTGCTAGGACACCGATGCCC 60 consensus_10259#5 ------------------------------------------------------------ consensus_10259#1 ---CCGCCCACGCGTCCGAAAAGTTGGCACAAAAATGGCCCCTGCAACGACGCGTGTTGC 57 consensus_10259#4 ------------------------------------------------------------ consensus_10259#2 -------------------------------------------------CCGCCCAC-GC 10 consensus_10259#3 ------------------------------------------------------------ consensus_10259#0 TTTTTCTTCCCACTCGCTGACAGTTGAAGGAGAGTCGGTGCATTTTGATCCATTTCATCG 120 consensus_10259#5 --------CAAGGAGCAAAGGAAAGTCAAACGAAACAGTTTGATCGCTTCGTCACGCAGA 52 consensus_10259#1 ATAATTTTTCCCTCTCGTAGTGAAAAACTACATCCCGTTTCACCGTTTTGTGTGTGTGTT 117 consensus_10259#4 ------------------------------------------------------------ consensus_10259#2 GTCCGCGTTACCGTACGTTGCAAGGAGCAA------GTTTGATCGTTTCGTCCGCAGACT 64 consensus_10259#3 ----------CCGCCCAC-GCGTCCGGCAA------GTTTGATCGTTTCGTCCGCAGACT 43 consensus_10259#0 GCAGCCGTTACCGTACGTTGCAAGGAGCAA------GTTTGATCGTTTCGTCCGCAGACT 174 consensus_10259#5 CTCACGCAGATCAAAAGCAGTAACCATCCAC--CATGGGTCACCATCCCGAGCCGCCAGT 110 consensus_10259#1 TGTTTGTTGCAGAT-CAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCA 176 consensus_10259#4 ------CCGCCCACGCGTCCGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCA 54 consensus_10259#2 CA-----CGCAGAT-CAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCA 118 consensus_10259#3 CA-----CGCAGAT-CAAAAGCAGTAACCATCCATTATGGGTCACCATCCCGAGCCGCCA 97 consensus_10259#0 CA-----CGCAGAT-CAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCA 228 consensus_10259#5 GATG-ATTTCGGAC-AAGCTGCCGGAATCGTT--GCGTAAG--AAGATGCTGACGTTCCA 164 * * ** * ** * * * * * ** * ** *** consensus_10259#1 GTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCG 236 consensus_10259#4 GTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCG 114 consensus_10259#2 GTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCG 178 consensus_10259#3 GTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCG 157 consensus_10259#0 GTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCG 288 consensus_10259#5 G-GCGAAGAACGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCG 223 * * * ************************************************** consensus_10259#1 AAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCT-GTTCGGCAT 295 consensus_10259#4 AAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCT-GTTCGGCAT 173 consensus_10259#2 AAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCT-GTTCGGCAT 237 consensus_10259#3 AAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCT-GTTCGGCAT 216 consensus_10259#0 AAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCT-GTTCGGCAT 347 consensus_10259#5 AAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCNTGTTCGGCAT 283 ************************************************* ********* consensus_10259#1 CA-CGGTCGCGCTGTGCGGTGTCGGCCTGCTC--GGCATCGTCAAGCTGGTGTACGATCT 352 consensus_10259#4 CA-CGGTCGCGCTGTGTGGTGTCGGCCTGCTC--GGCATCGCCAAGCTGGTGTACGATCT 230 consensus_10259#2 CA-CGGTCGCGCTGTGTGGTGTCGGCCTGCTC--GGCATCGCCAAGCTGGTGTACGATCT 294 consensus_10259#3 CA-CGGTCGCGCTGTGCGGTGTCGGCCTGCTC--GGCATCGTCAAGCTGGTGTACGATCT 273 consensus_10259#0 CA-CGGTCGCGCTGTGCGGTGTCGGCCTGCTC--GGCATCGTCAAGCTGGTGTACGATCT 404 consensus_10259#5 CNACGGTCGCGCTGTGCGGTGTCGGCCTGCTCCGGNCATCGTCAAGCTGGTGTACGATCT 343 * ************* *************** * ***** ****************** consensus_10259#1 TGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAA-----AAACGAAGCAGGCTGGGGA 407 consensus_10259#4 CGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGA 290 consensus_10259#2 CGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGA 354 consensus_10259#3 CGGATTCGCCAAAAAGAAGGCATAAGCAACAGCAAA-AAAAAAACGAAGCAGGCTGGGGA 332 consensus_10259#0 CGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAA-AAAAAAACGAAGCAGGCTGGGGA 463 consensus_10259#5 CNGATTCGC--------------------------------------------------- 352 ******* consensus_10259#1 GGTCGGGCG-TACGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACAT 466 consensus_10259#4 GGTCGAGCGGCGTGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACAT 350 consensus_10259#2 GGTCGAGCGGCGTGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACAT 414 consensus_10259#3 GGTCGAGCGGCGTGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACAT 392 consensus_10259#0 GGTCGAGCGGCGTGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACAT 523 consensus_10259#5 ------------------------------------------------------------ consensus_10259#1 AAAATTTGCGTTTTTATTCCCTTCAAAAAATACTACTACTGAAT---------------- 510 consensus_10259#4 AAAATTTGCGTTTTTATTCCCTTCAAAACCCAG--------------------------- 383 consensus_10259#2 AAAATTTGCGTTTTTATTCCCTTCAAAACCCTGAAAAAAAAAAAAAAAAAAAAAAAAAAA 474 consensus_10259#3 AAAATTTGCGTTTTTATTCCCTTCCG---------------------------------- 418 consensus_10259#0 AAAATTTGCGTTTTTATTCCCTTCAC---------------------------------- 549 consensus_10259#5 ------------------------------------------------------------ consensus_10259#1 -- consensus_10259#4 -- consensus_10259#2 AA 476 consensus_10259#3 -- consensus_10259#0 -- consensus_10259#5 -- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||