These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1041#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 441 fasta sequence [CCGCCCACGCGTCCGCGAAAACCCGCGAAGAACAGTTCTGGGTGCCGATACTGGCCCAAGCTCATCGACAGTACGGTTCAGGGCGCACGGAGCTAACGGCAAAGGTGCTGTACCTGTCGTGTGTCATGCACTACCCACTGTACGGCACGACGATGTTCGCCGTGTCCTACCGTGGCTATTGGAGCTATGGCAACAGTCTCATACTCGGCGTGAACTGCGAGGGTATCATCCTGATCAAGCCGGACGACAAGTTCGTGCTGTACGAGTTCCGGTACGCCGAGGTGGAGTCGATCATGCTCGATCCGAGCGACAGCTTCATCACGATCAGCCTGAACCGGCACACCAGCACCGGCAGCGCCGATCAGCAGCGGTGCTTCGTGTTCGAGACGGCGCAGAAGAACGAGATCGGCTCGCTGATCGTGTCCTACTATCCCGCCCTTT] [+] EMBL BM624947 [CCGCCCACGCGTCCGCGAAAACCCGCGAAGAACAGTTCTGGGTGCCGATACTGGCCCAAGCTCATCGACAGTACGGTTCAGGGCGCACGGAGCTAACGGCAAAGGTGCTGTACCTGTCGTGTGTCATGCACTACCCACTGTACGGCACGACGATGTTCGCCGTGTCCTACCGTGGCTATTGGAGCTATGGCAACAGTCTCATACTCGGCGTGAACTGCGAGGGTATCATCCTGATCAAGCCGGACGACAAGTTCGTGCTGTACGAGTTCCGGTACGCCGAGGTGGAGTCGATCATGCTCGATCCGAGCGACAGCTTCATCACGATCAGCCTGAACCGGCACACCAGCACCGGCAGCGCCGATCAGCAGCGGTGCTTCGTGTTCGAGACGGCGCAGAAGAACGAGATCGGCTCGCTGATCGTGTCCTACTATCCCGCCCTTT] consensusID : consensus_1041#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 297 fasta sequence [CTCACTGATCGTGTCCTACTATCCCGCCCTTTCGAACTGGATCACCGAGAACGAGGTGCCGCCGAAGAAGAGCAAGGGCATCACGAACGAGGACCGGGTCCGACTGCACCACAACCTGGTCGTCTGCCGGCGCCACCTGGTCGATACGGAGCTGCTGCGCAAACCGCAGGACCCGAGCGGTGGCTTCCTGCGCAACACGCTGCGCCGGCTGTCGAAGCATCGGCTTGAGAAGCTGCGGGCCGAGCACGGCAGCCCGGTTCACGACCACGGCGAAACGTACAAGGGCTTCCCGCACGC] [+] EMBL AGA282944 [CTCACTGATCGTGTCCTACTATCCCGCCCTTTCGAACTGGATCACCGAGAACGAGGTGCCGCCGAAGAAGAGCAAGGGCATCACGAACGAGGACCGGGTCCGACTGCACCACAACCTGGTCGTCTGCCGGCGCCACCTGGTCGATACGGAGCTGCTGCGCAAACCGCAGGACCCGAGCGGTGGCTTCCTGCGCAACACGCTGCGCCGGCTGTCGAAGCATCGGCTTGAGAAGCTGCGGGCCGAGCACGGCAGCCCGGTTCACGACCACGGCGAAACGTACAAGGGCTTCCCGCACGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1041#0 CCGCCCACGCGTCCGCGAAAACCCGCGAAGAACAGTTCTGGGTGCCGATACTGGCCCAAG 60 consensus_1041#1 ------------------------------------------------------------ consensus_1041#0 CTCATCGACAGTACGGTTCAGGGCGCACGGAGCTAACGGCAAAGGTGCTGTACCTGTCGT 120 consensus_1041#1 ------------------------------------------------------------ consensus_1041#0 GTGTCATGCACTACCCACTGTACG-GCACGACGATGTTCGCCGTGTCCTACCGTGGCTAT 179 consensus_1041#1 -------------CTCACTGATCGTGTCCTACTAT-CCCGCCCTTTCGAACTG-GATCAC 45 * ***** ** * * ** ** **** * ** ** * * * consensus_1041#0 TGGAGCTATGGCAACAGTCTCATACTCGGCGTGAACTGCGAGGGTATCATCCTGATCAAG 239 consensus_1041#1 CGAGAACGAGGTGCCG--CCGAAGAAGAGCAAGGGCATCACGAACGAGGACCGGGTCCGA 103 * ** * * * ** * * * * ** * ** consensus_1041#0 CCGGACGACAAGTTCGTGCTGTACGAGTTCCGGTACGCCGAGGTGGAGTCGATCATGCTC 299 consensus_1041#1 CTGCACCACAACCTGGTCGTCTGCCGGCGCCACCTGGTCGATACGGAGCTGCT---GCGC 160 * * ** **** * ** * * * * ** * *** **** * * ** * consensus_1041#0 GATCCGAGCGACA-GCTTCATCACGATCAGCCTGAACCGGCACACCAGCACCGGCAGCGC 358 consensus_1041#1 AAACCGCAGGACCCGAGCGGTGGCTTCCTGCGCAACACGCTGCGCCGGCTGTCGAAGCAT 220 * *** *** * * * * ** * ** * ** ** * *** consensus_1041#0 CGATCAGCAGCGGTGCTTCGTGTTCGAGACGGCGCAGAAGAACGAGATCGGCTCGCTGAT 418 consensus_1041#1 CGGCTT---GAGAAGCTGCGGGCCGAGCACGGCAGCCCGGTTCACGACCA--CGGCGAAA 275 ** * * *** ** * ***** * * ** * ** * consensus_1041#0 CGTGTCCTACTATCCCGCCCTTT 441 consensus_1041#1 CGTACAAGGGCTTCCCGCACGC- 297 *** ****** * |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||