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Anopheles gambiae
cluster # 10454 cluster # 10454       Sequences # 40       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10454#0 length = 907 sequences # 1  
consensus_10454#1 length = 689 sequences # 14  
consensus_10454#2 length = 633 sequences # 13  
consensus_10454#3 length = 555 sequences # 10  
consensus_10454#4 length = 198 sequences # 2  

consensusID : consensus_10454#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 907
fasta sequence
                              [TGTCAGCAGATNGGCCCGGGCTTACGATTGCAGTCACAGAACACAGCAGCTTGTCGTAGATAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTNTGTGGGACTAGTGACGGTTATGTAGTACCTGCTACGCAGTACACCAGTGGTCAACATAGATCCTCCCACTACTACGGTAGCACCTGANCACCACANGGTAGCACCGACACCACCACGGTAGCACCTGACCACACCACGGTAGCACCGACCATACCACTNAATGTGGNACCGACCANCAGCGANGTAACTGTAGGACACCTGGACAAGNCAAGCCACCACCACAGNTGGNCACCTGGACCCAGTAAANCCACCTANCGGGAAGTAACCGAGTAACACAGNGGACAACNCTTACCAAGTGGCCCACNAGGAATGTTAGACAAAGGCTTAGNNCCTTACGGTAACCCAGAGTAGTANACGTNACTAGGCAAGCCATAACGTTGGGANACAATGGTACCAGACTAACCTNAAGTCCAAAACATAAAANTTANTGGTAAAACCCAGGTAAGCACCGGNGTTCACAAACATTAATNCCACTACTCANACTCACCTACACACGGTTCAGGTCCCCTTACANCTTTCAACCAACACCCACTTTAACCGCGCAAAACANCGGGGGNTTCTAGNCCCGCANCGCCTNTGGCACACCAGCACAACACAGGTCNNAGNTNCAGACCAGATCTAACAAGCACCCGGCGACACATCTGGCGTAACCACCCCAACCCATGCAAACATNTACANCNGATNTCTCNTCAACGNATCCTACGGTCACGACGACNCACAGAANCCCCTACACGNACATCCAACACCNNCCACGCACCACNACACACTGAACNATCANANCACCCACCGCTCGANCCCATTCTG]

[+] EMBL AL695959             [TGTCAGCAGATNGGCCCGGGCTTACGATTGCAGTCACAGAACACAGCAGCTTGTCGTAGATAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTNTGTGGGACTAGTGACGGTTATGTAGTACCTGCTACGCAGTACACCAGTGGTCAACATAGATCCTCCCACTACTACGGTAGCACCTGANCACCACANGGTAGCACCGACACCACCACGGTAGCACCTGACCACACCACGGTAGCACCGACCATACCACTNAATGTGGNACCGACCANCAGCGANGTAACTGTAGGACACCTGGACAAGNCAAGCCACCACCACAGNTGGNCACCTGGACCCAGTAAANCCACCTANCGGGAAGTAACCGAGTAACACAGNGGACAACNCTTACCAAGTGGCCCACNAGGAATGTTAGACAAAGGCTTAGNNCCTTACGGTAACCCAGAGTAGTANACGTNACTAGGCAAGCCATAACGTTGGGANACAATGGTACCAGACTAACCTNAAGTCCAAAACATAAAANTTANTGGTAAAACCCAGGTAAGCACCGGNGTTCACAAACATTAATNCCACTACTCANACTCACCTACACACGGTTCAGGTCCCCTTACANCTTTCAACCAACACCCACTTTAACCGCGCAAAACANCGGGGGNTTCTAGNCCCGCANCGCCTNTGGCACACCAGCACAACACAGGTCNNAGNTNCAGACCAGATCTAACAAGCACCCGGCGACACATCTGGCGTAACCACCCCAACCCATGCAAACATNTACANCNGATNTCTCNTCAACGNATCCTACGGTCACGACGACNCACAGAANCCCCTACACGNACATCCAACACCNNCCACGCACCACNACACACTGAACNATCANANCACCCACCGCTCGANCCCATTCTG]


>consensus_10454#0 TGTCAGCAGATNGGCCCGGGCTTACGATTGCAGTCACAGAACACAGCAGCTTGTCGTAGA TAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTNTGTGGGACTAGTGACGG TTATGTAGTACCTGCTACGCAGTACACCAGTGGTCAACATAGATCCTCCCACTACTACGG TAGCACCTGANCACCACANGGTAGCACCGACACCACCACGGTAGCACCTGACCACACCAC GGTAGCACCGACCATACCACTNAATGTGGNACCGACCANCAGCGANGTAACTGTAGGACA CCTGGACAAGNCAAGCCACCACCACAGNTGGNCACCTGGACCCAGTAAANCCACCTANCG GGAAGTAACCGAGTAACACAGNGGACAACNCTTACCAAGTGGCCCACNAGGAATGTTAGA CAAAGGCTTAGNNCCTTACGGTAACCCAGAGTAGTANACGTNACTAGGCAAGCCATAACG TTGGGANACAATGGTACCAGACTAACCTNAAGTCCAAAACATAAAANTTANTGGTAAAAC CCAGGTAAGCACCGGNGTTCACAAACATTAATNCCACTACTCANACTCACCTACACACGG TTCAGGTCCCCTTACANCTTTCAACCAACACCCACTTTAACCGCGCAAAACANCGGGGGN TTCTAGNCCCGCANCGCCTNTGGCACACCAGCACAACACAGGTCNNAGNTNCAGACCAGA TCTAACAAGCACCCGGCGACACATCTGGCGTAACCACCCCAACCCATGCAAACATNTACA NCNGATNTCTCNTCAACGNATCCTACGGTCACGACGACNCACAGAANCCCCTACACGNAC ATCCAACACCNNCCACGCACCACNACACACTGAACNATCANANCACCCACCGCTCGANCC CATTCTG



consensusID : consensus_10454#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 689
fasta sequence
                              [ACCGGTCTAAAAGCTGCGGAATTCCTCGAGCACTGTTGGCCTACTGGAATAGTGACCTACAGAACATTCCCGATTGCAGCCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCCAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACTACTACTGTGGCACCGACCACTACCACTACTGTG-GCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCATGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTC-------AAAAAAAAAAAAAAAAAAAAGGCCACATGTGC-CCGAGCTGGAGGGGGCGTCCGCTAGACTAGTCT]

[-] EMBL CNS08I94             [ACCGGTCTAAAAGCTGCGGAATTCCTCGAGCACTGTTGGCCTACTGGAATAGTGACCTACAGAACATTCCCGATTGCAGCCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTTTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACTACTACTGTGGCACCGACCACTACAACTACTGTG GCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCGTGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGT                                                                                                                        ]
[-] EMBL CNS08GDJ             [        tAATGCTGCGGAATTCCTCGAGAACTGTTGGCCTACT GAATAGTGACCTACAGAAAATTCCCGATTGCAGCCACAGAACGCAGCGGCTTGCGTAGAAAAGAAACAAACCCAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTAACTGTTTTTGTCCTGCTTGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACTACTATTGTGGCACCGACAACTACAACTATTGTG GCACCTGGACAAACAACCACCACCAAAGTGGCACCTGGACAAACAACCACCACCAAAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACCACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGGGCATACGTGGAAATGTCGATACTAGTCAACTAATTGTACCATGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACAAAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAAC                                                                            ]
[+] EMBL CNS08PQ6             [                                                    TGAACTACAGAACATTCCCGATTGCAGTCACAGAACACAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACGGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGACCACCACCACGGTAGCACCGACCACCACCACGGTAGCACCGACCAC  C ACCACGGTAGCACCGACCACTACCACTACTGTG GCACC  GAC   C ACCACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCGTGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAGAATAAATTTAAATGTAAAAACCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGC CCGAGCTGGAGGGGG                  ]
[+] EMBL CNS08MM2             [                                                         TACAGAACATTCCCGATTGCAGCCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACTACTACTGTGGCACCGACCACTACAACTACTGTG GCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCGTGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAGAATAAATTTAAATGTAAAAACCTC         AAAAAAAAAAAAAAAAAAGGCCACATGTGCGCCAGGCTG                         ]
[+] EMBL BM617232             [                                                         ccgAGAACATTCCCGATTGCAGCCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCCAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACTACTACTGTGGCACCGACCACTACCACTACTGTG GCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCATGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACAAAGTTTGGTGCGACTGAAAAACGTGTGAAGAAG                                                                                                                 ]
[+] EMBL BM616033             [                                                         ccgAGAACATTCCCGATTGCAGCCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCCAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACTACTACTGTGGCACCGACCACTACCACTACTGTG GCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCATGCGGTAAACATATCATTACTTTAAGTAGTCTACT                                                                                                                                                         ]
[+] EMBL CNS08GDI             [                                                               ACATTCCCGATTGCAGCCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCCAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACTACTACTGTGGCACCGACCACTACCACTACTGTG GCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCATGCGGTAAACATATC                                                                                                                                                                             ]
[+] EMBL CNS08WRA             [                                                                CATTCCCGATTGCAGCCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACTACTGCTGTGGCACCGACCACTACAACTACTGTG GCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCGTGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAGAATAAATTTAAATGTAAAAACCTC       AAAAAAAAAAAAAAAAAAAAGGCCACATGTGC CCGAGCTGGGGGTTGCGTCCGCTAGACTAGTCT]
[+] EMBL BM578631             [                                                              ccgATTCCCGATTGCAGCCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCCAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACTACTACTGTGGCACCGACCACTACCACTACTGTG GCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCATGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACAAAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTC                                                                         ]
[-] EMBL CNS08MM3             [                                                                 ATTCCCGATTGCAGCCACAGAACGCAGCGGCTTGCGTAGAAAAGAAACAAACCAAACACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACTACTACTGTGGCACCGACCACTACAACTACTGTG GCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCGTGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAGAATAAATT                                                                                         ]
[+] EMBL BM613585             [                                                              ccgATTCCCGATTGCAGCCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCCAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACTACTACTGTGGCACCGACCACTACCACTACTGTG GCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCATGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACAAAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAA                                                                                                 ]
[+] EMBL BM587254             [                                                                 ccgCCCGATTGCAGCCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCCAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACTACTACTGTGGCACCGACCACTACCACTACTGTG GCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCATGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACAAAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTC                                                                         ]
[+] EMBL AF046924             [                                                                     CCGATTGCAGCCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCCAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACTACTACTGTGGCACCGACCACTACCACTACTGTG GCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCATGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACAAAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACC                                                                           ]
[+] EMBL CNS08Y2R             [                                                                                                                                                     GGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACTACTACTGTGGCACCGACCACTACAACTACTGTGCGCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCGTGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAGAATAAATTTAAATGTAAAAACC                                                                           ]


>consensus_10454#1 ACCGGTCTAAAAGCTGCGGAATTCCTCGAGCACTGTTGGCCTACTGGAATAGTGACCTAC AGAACATTCCCGATTGCAGCCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCCA AAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCA GTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTA GCACCGACCACCACTACGGTAGCACCGACCACTACTACTACTGTGGCACCGACCACTACC ACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACC ACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCA AGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCA ATGTCGATACTAGTCAACTAATTGTACCATGCGGTAAACATATCATTACTTTAAGTAGTC TACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAA AATAAATTTAAATGTAAAAACCTCAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGA GCTGGAGGGGGCGTCCGCTAGACTAGTCT



consensusID : consensus_10454#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 633
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCG-GAACATTCCCGATTGCAGTCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGCGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACCACTACTGTGGCACCGACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCGTGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTCCACGTAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACCTGTGC]

[+] EMBL BM657739             [CCGCCCACGCGTCCGCCCACGCGTCCG GAACATTCCCGATTGCAGTCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGCGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACCACTACTGTGGCACCGACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCGTGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGT AAAACCTCCACGT                                      ]
[+] EMBL BM602803             [            CCGCCCACGCGTCCG GAACATTCCCGATTGCAGTCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGCGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACCACTACTGTGGCACCGACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCGTGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAA                                                                                                  ]
[+] EMBL BM595839             [            CCGCGGACGCGT  G G   GTTCCCGATTGCAGTCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGCGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACCACTACTGTGGCACCGACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCGTGCGGTAAACATATCATTACTTTAAGTAGCCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTC                                           ]
[+] EMBL BM587120             [            CCGCCCACGCGTCCGAGAACATTCCCGATTGCAGCCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCCAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM624932             [                        CCG GAACATTCCCGATTGCAGTCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGCGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACCACTACTGTGGCACCGACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCGTGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGT                                                                          ]
[+] EMBL BM591798             [                        CCG GAACATTCCCGATTGCAGTCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGCGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACCACTACTGTGGCACCGACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCGTGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTC                                           ]
[+] EMBL BM578862             [                      ccgca GAACATTCCCGATTGCAGTCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGCGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACCACTACTGTGGCACCGACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCGTGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTC                                           ]
[+] EMBL CNS08U22             [                              ACATTCCCGATTGCAGCCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACTACTACTGTGGCACCGACCACTACAACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCGTGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAGAATAAATTTAAATGTAAAAACCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACCTGTGC]
[+] EMBL BM575659             [                                ccgCCCGATTGCAGTCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGCGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACCACTACTGTGGCACCGACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCGTGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTC                                           ]
[+] EMBL BM640909             [                                ccgCCCGATTGCAGTCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGCGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACCACTACTGTGGCACCGACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCGTGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGT                                                                          ]
[+] EMBL BM582501             [                                                                                                                               CTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACCACTACTGTGGCACCGACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCGTGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGG                                                                                ]
[-] EMBL CNS08SSE             [                                                                                                                                                                                                                                                      ACTGTGGCACCGACCACTACAACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCGTGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACAC                                                                     ]
[-] EMBL CNS08U23             [                                                                                                                                                                                                                                                                              atttTGGCACCTGGAAAAAAAACCACCACCAAAGTGGCACCTGGAAAAAAAACCACCACCAAAGTGGCATTTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGGGCATACGTGGGAATGTCGATACTAGTCAACTAATTGTACCGTGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAGAATAAATTTAAATGTAAAAA                                               ]


>consensus_10454#2 CCGCCCACGCGTCCGCCCACGCGTCCGGAACATTCCCGATTGCAGTCACAGAACGCAGCA GCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGCGAC TAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTA CGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTA CCACTACTGTGGCACCGACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCA CAGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCG GAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTAC CAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCGTGCGG TAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACG TGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTCCACGTAAAAA AAAAAAAAAAAAAAAAAAAAAGGCCACCTGTGC



consensusID : consensus_10454#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 555
fasta sequence
                              [ACCCACGCGTCCG-GAACATTCCCGATTGCAGTCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACCACTACTGTGGCACCGACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCATGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTCACTCGAAAA]

[+] EMBL BM606522             [ACCCACGCGTCCGAGAACATTCCCGATTGCAGTCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACCACTACTGTGGCACCGACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCC  CAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCATGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTC         ]
[+] EMBL BM627346             [          CCG GAACATTCCCGATTGCAGTCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACCACTACTGTGGCACCGACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCATGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTCACTCG    ]
[+] EMBL BM610109             [          CCG GAACATTCCCGATTGCAGTCACAGAACACAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACGGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGACCACCACCACGGTAGCACCGACCACCACCACGGTAGCACCGACCACTACCACTACTGTGGCACCGACCACCACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTGGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCATGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTC         ]
[+] EMBL BM605835             [          CCG GAACATTCCCGATTGCAGTCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACCACTACTGTGGCACCGACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCATGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTC         ]
[+] EMBL BM578870             [          CCG GAACATTCCCGATTGCAGTCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACCACTACTGTGGCACCGACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCATGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGT                  ]
[+] EMBL BM611089             [          CCGAGAACATTCCCGATTGCAGTCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGAGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACCACTACTGTGGCACCGACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCATGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTT                                           ]
[+] EMBL BM596188             [                  ccgCCCGATTGCAGTCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACCACTACTGTGGCACCGACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCATGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTA                 ]
[+] EMBL BM605222             [                            ccgGTCACAGAACGCAGCAGCTTGCGTAGAAAAGAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACCACTACTGTGGCACCGACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCATGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTC         ]
[+] EMBL AGA7394              [                                                               AACAAACCCAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACTACTACTGTGGCACCGACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCATGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACAAAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTCACTCGAAAA]
[+] EMBL BM620500             [                                                                                                          CTAGTGACTGTTTGTGTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCCACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACCACTACTGTGGCACCGACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTGAAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAACTAATTGTACCATGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACAT                                                                                 ]


>consensus_10454#3 ACCCACGCGTCCGGAACATTCCCGATTGCAGTCACAGAACGCAGCAGCTTGCGTAGAAAA GAAACAAACCAAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGT GTCCTGCTCGCAGTCACCAGTGGTCAAATAGATCCTCCCACTACTACGGTAGCACCGGCC ACCACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACCACTACTGTGGCA CCGACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACAGTGGCATCTGGA CCAGTAACCACTACCGGAAGTACCGATACAACGACACCTTCAAGTGCCCCACAGGATGTG AAAGCTGCCCTCGTACCAGTGTTGTTGGGAGCATACGTGGCAATGTCGATACTAGTCAAC TAATTGTACCATGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTG GTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAA AACCTCACTCGAAAA



consensusID : consensus_10454#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 198
fasta sequence
                              [CCGGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTATATGGCGATACTAGTCAACTAATTGTACCGTGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTC]

[+] EMBL BM612355             [CCGGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTATATGGCGATACTAGTCAACTAATTGTACCGTGCGGTAAACATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTC]
[+] EMBL BM655301             [                                                                                          AAGATATCATTACTTTAAGTAGTCTACTTTCAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTC]


>consensus_10454#4 CCGGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTATATGGCG ATACTAGTCAACTAATTGTACCGTGCGGTAAACATATCATTACTTTAAGTAGTCTACTTT CAACATAGTTTGGTGCGACTGAAAAACGTGTGAAGAAGCGGTTTGGTAACACAAAATAAA TTTAAATGTAAAAACCTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10454#1      ACCGGTCTAAAAGCTGCGGAATTCCTCGAGCACTGTTGGCCTACTGGAATAGTGACCTAC 60
consensus_10454#4      ------------------------------------------------------------
consensus_10454#2      ----------------------------------CCGCCCACGCGTCCGCCCACGCGTCC 26
consensus_10454#3      ------------------------------------------------ACCCACGCGTCC 12
consensus_10454#0      ----------------------------------------------TGTCAGCAGATNGG 14
                                                                                   

consensus_10454#1      AGAACATTCCCGATTGCAGCCACAGAACGCAGCAGCTTGCGTAGAA--AAGAAACAAACC 118
consensus_10454#4      ------------------------------------------------------------
consensus_10454#2      GGAACATTCCCGATTGCAGTCACAGAACGCAGCAGCTTGCGTAGAA--AAGAAACAAACC 84
consensus_10454#3      GGAACATTCCCGATTGCAGTCACAGAACGCAGCAGCTTGCGTAGAA--AAGAAACAAACC 70
consensus_10454#0      CCCGGGCTTACGATTGCAGTCACAGAACACAGCAGCTTGTCGTAGATAAAGAAACAAACC 74
                                                                                   

consensus_10454#1      CAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCG 178
consensus_10454#4      ------------------------------------------------------------
consensus_10454#2      AAAAACATACAAACATGTTGAAAGTTGTTGTGCGACTAGTGACTGTTTGTGTCCTGCTCG 144
consensus_10454#3      AAAAACATACAAACATGTTGAAAGTTGTTGTGGGACTAGTGACTGTTTGTGTCCTGCTCG 130
consensus_10454#0      AAAAACATACAAACATGTTGAAAGTTGTNTGTGGGACTAGTGACGGTTATGTAGTACCTG 134
                                                                                   

consensus_10454#1      CAGT------CACCAGTGGTCAA-ATAGATCCTCCCACTACTACGGTAGCACCGGCCACC 231
consensus_10454#4      ------------------------------------------------------------
consensus_10454#2      CAGT------CACCAGTGGTCAA-ATAGATCCTCCCACTACTACGGTAGCACCGGCCACC 197
consensus_10454#3      CAGT------CACCAGTGGTCAA-ATAGATCCTCCCACTACTACGGTAGCACCGGCCACC 183
consensus_10454#0      CTACGCAGTACACCAGTGGTCAACATAGATCCTCCCACTACTACGGTAGCACCTGANCAC 194
                                                                                   

consensus_10454#1      ACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACTACTACTGTGGCACCG 291
consensus_10454#4      ------------------------------------------------------------
consensus_10454#2      ACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACCACTACTGTGGCACCG 257
consensus_10454#3      ACCACGGTAGCACCGACCACCACTACGGTAGCACCGACCACTACCACTACTGTGGCACCG 243
consensus_10454#0      CACANGGTAGCACCGAC-ACCACCACGGTAGCACCTGACCACACCACGGTAGCACCGACC 253
                                                                                   

consensus_10454#1      ACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACA-GTGGCACCTGGACA 350
consensus_10454#4      ------------------------------------------------------------
consensus_10454#2      ACCACTACCACTACTGTGGCACCTGGACAAACAACCACCACCACA-GTGGCACCTGGACA 316
consensus_10454#3      ACCACTACCACTACTGTGGCACCT-------------------------------GGACA 272
consensus_10454#0      ATACCACTNAATGTGGNACCGACCANCAGCGANGTAACTGTAGGACACCTGGACAAGNCA 313
                                                                                   

consensus_10454#1      AACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAAC 410
consensus_10454#4      ------------------------------------------------------------
consensus_10454#2      AACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAAC 376
consensus_10454#3      AACAACCACCACCACAGTGGCATCTGGACCAGTAACCACTACCGGAAGTACCGATACAAC 332
consensus_10454#0      AGCCACCACCACAGNTGGNCACCTGGACCCAGTAAANCCACCTANCGGGAAGTAACCGAG 373
                                                                                   

consensus_10454#1      GACACCTTCAAGTGCCCC--ACAGGATGT---GAAAGCTGCCCTCGT-ACCAGTGTTGTT 464
consensus_10454#4      ----------------CC--GGCGACTGA---AAAACGTGTGAA-GA-AGCGGTTTGGTA 37
consensus_10454#2      GACACCTTCAAGTGCCCC--ACAGGATGT---GAAAGCTGCCCTCGT-ACCAGTGTTGTT 430
consensus_10454#3      GACACCTTCAAGTGCCCC--ACAGGATGT---GAAAGCTGCCCTCGT-ACCAGTGTTGTT 386
consensus_10454#0      TAACACAGNGGACAACNCTTACCAAGTGGCCCACNAGGAATGTTAGACAAAGGCTTAGNN 433
                                        *        **       *         *  *   *  * *  

consensus_10454#1      GGG-AGCATACGTGGCAAT----GTCGATACTAGTCAACTAATTGTACCATGCGGTAAAC 519
consensus_10454#4      ACACAAAATAAATTTATAT----GGCGATACTAGTCAACTAATTGTACCGTGCGGTAAAC 93
consensus_10454#2      GGG-AGCATACGTGGCAAT----GTCGATACTAGTCAACTAATTGTACCGTGCGGTAAAC 485
consensus_10454#3      GGG-AGCATACGTGGCAAT----GTCGATACTAGTCAACTAATTGTACCATGCGGTAAAC 441
consensus_10454#0      CCTTACGGTAACCCAGAGTAGTANACGTNACTAGGCAAGCCATAACGTTGGGANACAATG 493
                           *   **        *      **  ***** ***   **        *    **  

consensus_10454#1      ATATCA---TTACTTTAAGTAGTCTACTTTCAACATAGT--TTGGTGCGACTGAAAAACG 574
consensus_10454#4      ATATCA---TTACTTTAAGTAGTCTACTTTCAACATAGT--TTGGTGCGACTGAAAAACG 148
consensus_10454#2      ATATCA---TTACTTTAAGTAGTCTACTTTCAACATAGT--TTGGTGCGACTGAAAAACG 540
consensus_10454#3      ATATCA---TTACTTTAAGTAGTCTACTTTCAACATAGT--TTGGTGCGACTGAAAAACG 496
consensus_10454#0      GTACCAGACTAACCTNAAGTCCAAAACATAAAANTTANTGGTAAAACCCAGGTAAGCACC 553
                        ** **   * ** * ****     ** *  **  ** *  *     * *   **  ** 

consensus_10454#1      TGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTCAAAAAAAAAA 634
consensus_10454#4      TGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTC---------- 198
consensus_10454#2      TGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTCCACGTAAAAA 600
consensus_10454#3      TGTGAAGAAGCGGTTTGGTAACACAAAATAAATTTAAATGTAAAAACCTCACTCGAAAA- 555
consensus_10454#0      GGNGTTCACAAACATTAATNCCACTACTCANACTCACCTACACACGGTTCAGGTCCCCTT 613
                        * *   *      **  *  *** *   * * * *  *  * *    **          

consensus_10454#1      AAAAAAAAAAGGCCACATGTGCCCGAGCTGGAGGGGGCGTCCGCTAGACTAGTCT----- 689
consensus_10454#4      ------------------------------------------------------------
consensus_10454#2      AAAAAAAAAAAAAAAAAAAAAGGCCACCTGTGC--------------------------- 633
consensus_10454#3      ------------------------------------------------------------
consensus_10454#0      ACANCTTTCAACCAACACCCACTTTAACCGCGCAAAACANCGGGGGNTTCTAGNCCCGCA 673
                                                                                   

consensus_10454#1      ------------------------------------------------------------
consensus_10454#4      ------------------------------------------------------------
consensus_10454#2      ------------------------------------------------------------
consensus_10454#3      ------------------------------------------------------------
consensus_10454#0      NCGCCTNTGGCACACCAGCACAACACAGGTCNNAGNTNCAGACCAGATCTAACAAGCACC 733
                                                                                   

consensus_10454#1      ------------------------------------------------------------
consensus_10454#4      ------------------------------------------------------------
consensus_10454#2      ------------------------------------------------------------
consensus_10454#3      ------------------------------------------------------------
consensus_10454#0      CGGCGACACATCTGGCGTAACCACCCCAACCCATGCAAACATNTACANCNGATNTCTCNT 793
                                                                                   

consensus_10454#1      ------------------------------------------------------------
consensus_10454#4      ------------------------------------------------------------
consensus_10454#2      ------------------------------------------------------------
consensus_10454#3      ------------------------------------------------------------
consensus_10454#0      CAACGNATCCTACGGTCACGACGACNCACAGAANCCCCTACACGNACATCCAACACCNNC 853
                                                                                   

consensus_10454#1      ------------------------------------------------------
consensus_10454#4      ------------------------------------------------------
consensus_10454#2      ------------------------------------------------------
consensus_10454#3      ------------------------------------------------------
consensus_10454#0      CACGCACCACNACACACTGAACNATCANANCACCCACCGCTCGANCCCATTCTG 907
                                                                             




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)