These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1130#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 483 fasta sequence [CCGCAATGACCGGCGTGACGCTGGTGGTGCGTCAGCAGCGCGATCTGGCGGACCCGCTGCAGCCGGCTGTGCCGGTCCCGCACCACCGGTACCAGGAGCGCTTCCTCAGCTACGACGATCACGTCCGGTTCGGTGGGCTCGGCGGCAGCAGCCCACCCGACCTGGACCCGAACGGGCAGCAGCAGCAGCAGCAGCAGCACTACTATCACTACACGCACAGCAAGCGGCAGGCGGCACTGGAGGAAGGACCGGCCCCGTCGGCCGCCGACATCGAGGAGGCCCGGATACGGCGCTCCCTCTACGACAGCAGCTCGTACGTGCCGCGGTACATCAACGCCACCGGCTGGCTGCGGATCGAGGAGGGCAGCCCCGCCGCCGCCGCCGCCAACCCCGTCGGCAGCTCGATCGATCACGAGAAGCGCGACTACGTGCGACAGATGATGGTGCACGCCTGGAGCAACTACAAGCTGTACGCGTGGGGCA] [+] EMBL BM585322 [CCGCAATGACCGGCGTGACGCTGGTGGTGCGTCAGCAGCGCGATCTGGCGGACCCGCTGCAGCCGGCTGTGCCGGTCCCGCACCACCGGTACCAGGAGCGCTTCCTCAGCTACGACGATCACGTCCGGTTCGGTGGGCTCGGCGGCAGCAGCCCACCCGACCTGGACCCGAACGGGCAGCAGCAGCAGCAGCAGCAGCACTACTATCACTACACGCACAGCAAGCGGCAGGCGGCACTGGAGGAAGGACCGGCCCCGTCGGCCGCCGACATCGAGGAGGCCCGGATACGGCGCTCCCTCTACGACAGCAGCTCGTACGTGCCGCGGTACATCAACGCCACCGGCTGGCTGCGGATCGAGGAGGGCAGCCCCGCCGCCGCCGCCGCCAACCCCGTCGGCAGCTCGATCGATCACGAGAAGCGCGACTACGTGCGACAGATGATGGTGCACGCCTGGAGCAACTACAAGCTGTACGCGTGGGGCA] consensusID : consensus_1130#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 207 fasta sequence [TTGCCCCACGCGTACAGCTTGTAGTTGCTCCAGGCGTGCACCATCATCTCCTTCACTTTGTTGCGCTTCTCCCGCACGGCCCGGTCCGGGTCCTCGCCGACGGACGCGTTAAAGTGCAGCCCGGCCGGGGCGCGCGCCTTCTCGCCGCGCCTGTCCCCGCCCGCCACCTCCTGCAGCTGGCCTTCCTCCTGTTCCGGGGCGTGCTGC] [+] EMBL AGA283569 [TTGCCCCACGCGTACAGCTTGTAGTTGCTCCAGGCGTGCACCATCATCTCCTTCACTTTGTTGCGCTTCTCCCGCACGGCCCGGTCCGGGTCCTCGCCGACGGACGCGTTAAAGTGCAGCCCGGCCGGGGCGCGCGCCTTCTCGCCGCGCCTGTCCCCGCCCGCCACCTCCTGCAGCTGGCCTTCCTCCTGTTCCGGGGCGTGCTGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1130#0 CCGCAATGACCGGCGTGACGCTGGTGGT-GCGTCAGCAGCGCGATCTGGCGGACCCGCTG 59 consensus_1130#1 ---TTGCCCCACGCGTACAGCTTGTAGTTGCTCCAG--GCGTGCACCATC--ATCTCCTT 53 * **** *** ** ** ** *** *** * * * * * ** consensus_1130#0 CAGCCGGCTGTGCCGGTCCCGCACCACCGGTACCAGGAGCGCTTCCTCAGCTACGACGAT 119 consensus_1130#1 CACTTTGTTGCGCTTCTCCCGCACGGCCCGGTCCGGGT---CCTCGCCGACGGACGCGTT 110 ** * ** ** ******** ** * ** ** * ** * * ** * consensus_1130#0 CACGTCCGGTTCGGTGGGCTCGGCGGCAGCAGCCCACCCGACCTGGACCCGAACGGGCAG 179 consensus_1130#1 AAAGTGCAGCCCGGCCGGGGCGC--GCGCCTTCTCGCCGCGCCTGTCCCCGC-CCGCCAC 167 * ** * * *** ** ** ** * * * ** **** **** * * ** consensus_1130#0 CAGCAGCAGCAGCAGCAGCACTACTATCACTACACGCACAGCAAGCGGCAGGCGGCACTG 239 consensus_1130#1 CTCCTGCAGCTG--GCCTTCCTCCTGTTCCGGGGCGTGCTGC------------------ 207 * * ***** * ** ** ** * * ** * ** consensus_1130#0 GAGGAAGGACCGGCCCCGTCGGCCGCCGACATCGAGGAGGCCCGGATACGGCGCTCCCTC 299 consensus_1130#1 ------------------------------------------------------------ consensus_1130#0 TACGACAGCAGCTCGTACGTGCCGCGGTACATCAACGCCACCGGCTGGCTGCGGATCGAG 359 consensus_1130#1 ------------------------------------------------------------ consensus_1130#0 GAGGGCAGCCCCGCCGCCGCCGCCGCCAACCCCGTCGGCAGCTCGATCGATCACGAGAAG 419 consensus_1130#1 ------------------------------------------------------------ consensus_1130#0 CGCGACTACGTGCGACAGATGATGGTGCACGCCTGGAGCAACTACAAGCTGTACGCGTGG 479 consensus_1130#1 ------------------------------------------------------------ consensus_1130#0 GGCA 483 consensus_1130#1 ---- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||