These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1665#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 262 fasta sequence [CTGTCCCCGGCACCACGTGTCACGCACATCCGGAAGCCGTCGGTGCAGCGGGATCAGATCTGACACGTACTGATTGAGACCCTGCTCGTTCCAACCCTTCAGCACCAGCTCCCGAACGTTCGGCGGTAACACATCCGGCAGTTTCACCGGCAGTGCCATATCACCGGGCGATCCATCCGGGTCCGGTGAACCAACGGCTAGTCGGGCAGCATTCAGTATGAGATGGAGCGCCTCCTCCAGCGTTGCCGTATCGTTGGACGGG] [+] EMBL CNS09539 [CTGTCCCCGGCACCACGTGTCACGCACATCCGGAAGCCGTCGGTGCAGCGGGATCAGATCTGACACGTACTGATTGAGACCCTGCTCGTTCCAACCCTTCAGCACCAGCTCCCGAACGTTCGGCGGTAACACATCCGGCAGTTTCACCGGCAGTGCCATATCACCGGGCGATCCATCCGGGTCCGGTGAACCAACGGCTAGTCGGGCAGCATTCAGTATGAGATGGAGCGCCTCCTCCAGCGTTGCCGTATCGTTGGACGGG] consensusID : consensus_1665#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 170 fasta sequence [GTCAGAGCAGAACCCGCCGCACCGACGGCCTCCGGATGTGCGTGACACGTGGTGCCGGGGACAGGAGCAGGAGCGACGGCGGCGTAATGTTGGTCCCGGGACATTGCCCCGCGCGGCCATAGTGATCGTGTTCGACAATGAGGCCAGGTCGGTGTTGCAGCGTACCGTAC] [+] EMBL CNS09538 [GTCAGAGCAGAACCCGCCGCACCGACGGCCTCCGGATGTGCGTGACACGTGGTGCCGGGGACAGGAGCAGGAGCGACGGCGGCGTAATGTTGGTCCCGGGACATTGCCCCGCGCGGCCATAGTGATCGTGTTCGACAATGAGGCCAGGTCGGTGTTGCAGCGTACCGTAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1665#0 CTGTCCCCGGCACCACGTGTCACGCACATCCGGAAGCCGTCGGTGCAGCGGGATCAGATC 60 consensus_1665#1 ------------------------------------------------------------ consensus_1665#0 TGACACGTACTGATTGAGACCCTGCTCGTTCCAACCCTTCAGCACCAGCTCCCGAACGTT 120 consensus_1665#1 -----------------------GTCAGAGCAGAACCCGCCGCACCGACGGCCTCCGGAT 37 * * * * ** * ***** * ** * * consensus_1665#0 CGGCGGTAACACATC-CGGCAGTTTCACCGGCAGT-GCCATATCACCGGGCGATCCATCC 178 consensus_1665#1 GTGCG-TGACACGTGGTGCCGGGGACAGGAGCAGGAGCGACGGCGGCGTAATGTTGGTCC 96 *** * **** * * * * ** **** ** * * ** * *** consensus_1665#0 GGGTCCGGTGAACCA-ACGGCTAGTCGGGCAGCATTCAGTA-TGAGATGGAGCGCCTCCT 236 consensus_1665#1 CGGGACATTGCCCCGCGCGGCCATAGTGATCGTGTTCGACAATGAGGCCAGGTCGGTGTT 156 ** * ** ** **** * * * *** * **** * * * consensus_1665#0 CCAGCGTTGCCGTATCGTTGGACGGG 262 consensus_1665#1 GCAGCGT-ACCGTAC----------- 170 ****** ***** |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||