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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1769#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 639 fasta sequence
[GAATCCCNCGAGGTCGCATTGAAGGACTTGACATGAGCGGCAGTTTGAACTATTCGCCTTAATCCCACCATGGGACGCTTCCAGGCGAACCCATCCCCATTTGCCGACTGTCCGACCTGCCTCGCGCAAAGCGTTATTCTACGAGGTACTGGGCTTCTCCATCCGCATTGCGCACACAATAACCGATACGAGCCATATTGTTGTTTTACCACCTTTTTTGTGAAACTGTTTGTTGTTGTTTTCTTCGTCCCCATTGCCCGATTCAGCTTGGCCGGCTCTGGGCTCTGGACCGGGTTGACCATTCAATCCCCGGTTACTAATCCGGTGGCTTAACGGTCTGGAAGGAATCCGATTTTATTGTTTATTTCTTTTTTATGGCTTTTTAAACGGTGCCGTGCTTTCGCTGTGCGAGTTGATGTAGTTTTTTTTTGTTGTGTGGCAAAACGTGTACGAATTGTTGGATTTAATGCTGAGGAAAAGTCACAAGTGAGCCGTTGATGCGGCGTGCCGGTTTTGATCATATTGGTTGAGGGTTGGCTGAATTATTTACTACCCCGCAATGGTGGTGCCAGCGGTGCCAATAAAAACAACCATTACACCTACCTGAAGGAGTTCCGCGTGGAGCAGTGCCCCTCCTTT]
[+] EMBL AL932386 [GAATCCCNCGAGGTCGCATTGAAGGACTTGACATGAGCGGCAGTTTGAACTATTCGCCTTAATCCCACCATGGGACGCTTCCAGGCGAACCCATCCCCATTTGCCGACTGTCCGACCTGCCTCGCGCAAAGCGTTATTCTACGAGGTACTGGGCTTCTCCATCCGCATTGCGCACACAATAACCGATACGAGCCATATTGTTGTTTTACCACCTTTTTTGTGAAACTGTTTGTTGTTGTTTTCTTCGTCCCCATTGCCCGATTCAGCTTGGCCGGCTCTGGGCTCTGGACCGGGTTGACCATTCAATCCCCGGTTACTAATCCGGTGGCTTAACGGTCTGGAAGGAATCCGATTTTATTGTTTATTTCTTTTTTATGGCTTTTTAAACGGTGCCGTGCTTTCGCTGTGCGAGTTGATGTAGTTTTTTTTTGTTGTGTGGCAAAACGTGTACGAATTGTTGGATTTAATGCTGAGGAAAAGTCACAAGTGAGCCGTTGATGCGGCGTGCCGGTTTTGATCATATTGGTTGAGGGTTGGCTGAATTATTTACTACCCCGCAATGGTGGTGCCAGCGGTGCCAATAAAAACAACCATTACACCTACCTGAAGGAGTTCCGCGTGGAGCAGTGCCCCTCCTTT]
consensusID : consensus_1769#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 417 fasta sequence
[CCGCGTCAACCGATCCAACGAAATCTTTGTTTACTACGCAAACGGAGAAGCCCAACCATTACACCTACCTGAAGGAGTTCCGCGTGGAGCAGTGCCCCTCCTTTCTGCAGCACAAGTGCAACCAGCACCGGCCGTTCGTCTGCTTCAACTGGCACTTTATGAACCAGCGGCGGCGGCGCCCGGTCCGGCGGCGCGACGGCTCGTTCAACTACAGCGCGGACAACTACTGCCCGAAGTACGACGAGACGACCGGCATCTGTCCGGACGGGGACGACTGTCCGTTTCTGCACCGGACGGCGGGCGATACCGAGCGGCGCTACCATCTGCGCTACTACAAAACGTGCATGTGCGTGCACGATACGGACGCGCGCGGCTACTGCGTGAAGAACGGGCATCACTGTGCGTTCGCGCACGGCA]
[+] EMBL BM595124 [CCGCGTCAACCGATCCAACGAAATCTTTGTTTACTACGCAAACGGAGAAGCCCAACCATTACACCTACCTGAAGGAGTTCCGCGTGGAGCAGTGCCCCTCCTTTCTGCAGCACAAGTGCAACCAGCACCGGCCGTTCGTCTGCTTCAACTGGCACTTTATGAACCAGCGGCGGCGGCGCCCGGTCCGGCGGCGCGACGGCTCGTTCAACTACAGCGCGGACAACTACTGCCCGAAGTACGACGAGACGACCGGCATCTGTCCGGACGGGGACGACTGTCCGTTTCTGCACCGGACGGCGGGCGATACCGAGCGGCGCTACCATCTGCGCTACTACAAAACGTGCATGTGCGTGCACGATACGGACGCGCGCGGCTACTGCGTGAAGAACGGGCATCACTGTGCGTTCGCGCACGGCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1769#0 GAATCCCNCGAGGTCGCATTGAAGGACTTGACATGAGCGGCAGTTTGAACTATTCGCCTT 60
consensus_1769#1 -----------------------------------------------------CCGCGTC 7
*** *
consensus_1769#0 AATCCCACCATGGGACGCTTCCAGGCGAACCCATCCCCATTTGCC-GACTGTCCGACCTG 119
consensus_1769#1 AACCGATCCAACGAAATCTTTGTTTACTACGCAAACGGAGAAGCCCAACCATTACACCTA 67
** * *** * * *** ** ** * * *** ** * ****
consensus_1769#0 CCTCGCGCAAAGCGTTATTCTACGAGGTACTGGGCTTCTCCATCCGCATTGCGCACACAA 179
consensus_1769#1 CCTGAAGGAG-------TTCCGCGTGGAGCAGTGCCCCTCCTTTC-TGCAGCACA-AGTG 118
*** * * *** ** ** * * ** **** * * ** ** *
consensus_1769#0 TAACCGATACGAGCCATATTGTTGTTTTACCACCTTTTTTGTGAAACTGTTTGTTGTTGT 239
consensus_1769#1 CAACCAGCACCGGCCGTTCGTCTGCTTCAACTGGCACTTTATGAACCAGCG----GCGGC 174
**** ** *** * ** ** * * *** **** * * * *
consensus_1769#0 TTTCTTCGTCCCCATTGCCCGATTCAGCTTGGCCGGCTCTGGGCTCTGGACCGGGTTGAC 299
consensus_1769#1 GGCGCCCGGTCCGGCGGCGCGA--CGGCTCGTTCAACTACAG--CGCGGAC---AACTAC 227
** ** ** *** * *** * * ** * **** **
consensus_1769#0 CATTCAATCCCCGGTTACTAATCCGGTGGCTTAACGGTCTGGAAGGAATCCGATTTTATT 359
consensus_1769#1 TGCCCGAAGTACGACGAGACGACCGGCATCT-----GTCCGGACGGGGACG------ACT 276
* * ** * **** ** *** *** ** * * *
consensus_1769#0 GTTTATTTCTTTTTT--ATGGCTTTTTAAACGGTGCCGTGCTTTCGCTGTGCGAGTTGAT 417
consensus_1769#1 GTCCGTTTCTGCACCGGACGGCGGGCGATACCGAGCGGCGCT---ACCATCTGCGCTACT 333
** ***** * *** * ** * ** * *** * * * * * *
consensus_1769#0 GTAGTTTTTTTTTGTTGTGTGGCAAAACGTGTACGAATTGTTGGATTTAATGC-TGAGGA 476
consensus_1769#1 ACAAAACGTGCATGT-GCGTGC----ACG-ATACGGACGCGCGCGGCTACTGCGTGAAGA 387
* * *** * *** *** **** * * ** *** *** **
consensus_1769#0 AAAGTCACAAGTGAGCCGTTGATGCGGCGTGCCGGTTTTGATCATATTGGTTGAGGGTTG 536
consensus_1769#1 ACGGGCATCACTGTGC-GTTCGCGCACGGCA----------------------------- 417
* * ** * ** ** *** ** *
consensus_1769#0 GCTGAATTATTTACTACCCCGCAATGGTGGTGCCAGCGGTGCCAATAAAAACAACCATTA 596
consensus_1769#1 ------------------------------------------------------------
consensus_1769#0 CACCTACCTGAAGGAGTTCCGCGTGGAGCAGTGCCCCTCCTTT 639
consensus_1769#1 -------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||