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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1847#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 640 fasta sequence
[AGCAGAATCGGCACGAGGANANTGAAATGAACAATCTCGGCGACATACGCAAGCTGGCGGAGCGGGCGTGCAATCTCTACCAGCAGCACGGTTCGCCCGAATCGGGCGCCACCGTGCTGGACAAGGCGGCAAAGATACTGGAGCAGACGCACCCGGAAGACGCGCTGCAGCTGTACAAGCAGGCCGTCGACGTGGTTACGATCGAAGACTCAACGCGCCAGGGCGCCGAATACGCTAGCAAGGTGGCTCGCATCATGGTGAAGCTCGGCATGTACGATCAGGCGGCAGACGCTATACGGCGCGAAATCGGGCTGCACCAGCAGGTCGGTTCGGAGGGTGCCATCGGCCGGCTAGCGGTGGCACTGGTGCTGGTGCAGCTCGCCCGTGGCGATTATGTGGCGGCGGAGAAAGCGTTCAAGGAGTGGGGCAACTGTTGCGATGCGGCCGAAGTGCAAACGCTGGAATCGTTGCTACAGGCGTACGATGATGAGGATCCGGAACTGGCCCAGCGAGCCCTGTCGTCACCGTTCATCCGGCACATGGATGTGGAGTATGCGCGGCTGGCGCGGGATTTACCCCTCCCCAAGGGCGTCTCGATTGCACCGAAAGCGAACGTCATCGAGAATGCGGCCGCTTCGTA]
[+] EMBL BX469403 [AGCAGAATCGGCACGAGGANANTGAAATGAACAATCTCGGCGACATACGCAAGCTGGCGGAGCGGGCGTGCAATCTCTACCAGCAGCACGGTTCGCCCGAATCGGGCGCCACCGTGCTGGACAAGGCGGCAAAGATACTGGAGCAGACGCACCCGGAAGACGCGCTGCAGCTGTACAAGCAGGCCGTCGACGTGGTTACGATCGAAGACTCAACGCGCCAGGGCGCCGAATACGCTAGCAAGGTGGCTCGCATCATGGTGAAGCTCGGCATGTACGATCAGGCGGCAGACGCTATACGGCGCGAAATCGGGCTGCACCAGCAGGTCGGTTCGGAGGGTGCCATCGGCCGGCTAGCGGTGGCACTGGTGCTGGTGCAGCTCGCCCGTGGCGATTATGTGGCGGCGGAGAAAGCGTTCAAGGAGTGGGGCAACTGTTGCGATGCGGCCGAAGTGCAAACGCTGGAATCGTTGCTACAGGCGTACGATGATGAGGATCCGGAACTGGCCCAGCGAGCCCTGTCGTCACCGTTCATCCGGCACATGGATGTGGAGTATGCGCGGCTGGCGCGGGATTTACCCCTCCCCAAGGGCGTCTCGATTGCACCGAAAGCGAACGTCATCGAGAATGCGGCCGCTTCGTA]
consensusID : consensus_1847#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 619 fasta sequence
[AAAGCAGCCACCTGCTTCCGGAACGCAAAGTCGCTGGACCTGTGCCGCGACTGTCTGATGAAATCCGCCGACTGTCACCGCCAGAACCGTGCCCTGTTCCACGCGGCCAAGTGTCTCGATCAGGCGATACTGATCTGCAAGGAAATGAACAATCTCGGCGACATACGCAAGCTGGCGGAGCGGGCGTGCAATCTCTACCAGCAGCACGGTTCGCCCGAATCGGGCGCCACCGTGCTGGACAAGGCGGCAAAGATACTGGAGCAGACGCACCCGGAAGACGCGCTGCAGCTGTACAAGCAGGCCGTCGACGTGGTTACGATCGAAGACTCAACGCGCCAGGGCGCCGAATACGCTAGCAAGGTGGCTCGCATCATGGTGAAGCTCGGCATGTACGATCAGGCGGCAGACGCTATACGGCGCGAAATCGGGCTGCACCAGCAGGTCGGTTCGGAGGGTGCCATCGGCCGGCTAGCGGTGGCACTGGTGCTGGTGCAGCTCGCCCGTGGCGATTATGTGGCGGCGGAGAAAGCGTTCAAGGAGTGGGGCAACTGTTGCGATGCGGCCGAAGTGCAAACGCTGGAATCGTTGCTACAGGCGTACGATGATGAGGATCCGGAAC]
[+] EMBL BX617961 [AAAGCAGCCACCTGCTTCCGGAACGCAAAGTCGCTGGACCTGTGCCGCGACTGTCTGATGAAATCCGCCGACTGTCACCGCCAGAACCGTGCCCTGTTCCACGCGGCCAAGTGTCTCGATCAGGCGATACTGATCTGCAAGGAAATGAACAATCTCGGCGACATACGCAAGCTGGCGGAGCGGGCGTGCAATCTCTACCAGCAGCACGGTTCGCCCGAATCGGGCGCCACCGTGCTGGACAAGGCGGCAAAGATACTGGAGCAGACGCACCCGGAAGACGCGCTGCAGCTGTACAAGCAGGCCGTCGACGTGGTTACGATCGAAGACTCAACGCGCCAGGGCGCCGAATACGCTAGCAAGGTGGCTCGCATCATGGTGAAGCTCGGCATGTACGATCAGGCGGCAGACGCTATACGGCGCGAAATCGGGCTGCACCAGCAGGTCGGTTCGGAGGGTGCCATCGGCCGGCTAGCGGTGGCACTGGTGCTGGTGCAGCTCGCCCGTGGCGATTATGTGGCGGCGGAGAAAGCGTTCAAGGAGTGGGGCAACTGTTGCGATGCGGCCGAAGTGCAAACGCTGGAATCGTTGCTACAGGCGTACGATGATGAGGATCCGGAAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1847#0 ------------------------------------------------------------
consensus_1847#1 AAAGCAGCCACCTGCTTCCGGAACGCAAAGTCGCTGGACCTGTGCCGCGACTGTCTGATG 60
consensus_1847#0 ----------------------------------------------------------AG 2
consensus_1847#1 AAATCCGCCGACTGTCACCGCCAGAACCGTGCCCTGTTCCACGCGGCCAAGTGTCTCGAT 120
*
consensus_1847#0 CAGAATCGGCACGAGGANANTGAAATGAACAATCTCGGCGACATACGCAAGCTGGCGGAG 62
consensus_1847#1 CAGGCGATACTGATCTGCAAGGAAATGAACAATCTCGGCGACATACGCAAGCTGGCGGAG 180
*** * * ***************************************
consensus_1847#0 CGGGCGTGCAATCTCTACCAGCAGCACGGTTCGCCCGAATCGGGCGCCACCGTGCTGGAC 122
consensus_1847#1 CGGGCGTGCAATCTCTACCAGCAGCACGGTTCGCCCGAATCGGGCGCCACCGTGCTGGAC 240
************************************************************
consensus_1847#0 AAGGCGGCAAAGATACTGGAGCAGACGCACCCGGAAGACGCGCTGCAGCTGTACAAGCAG 182
consensus_1847#1 AAGGCGGCAAAGATACTGGAGCAGACGCACCCGGAAGACGCGCTGCAGCTGTACAAGCAG 300
************************************************************
consensus_1847#0 GCCGTCGACGTGGTTACGATCGAAGACTCAACGCGCCAGGGCGCCGAATACGCTAGCAAG 242
consensus_1847#1 GCCGTCGACGTGGTTACGATCGAAGACTCAACGCGCCAGGGCGCCGAATACGCTAGCAAG 360
************************************************************
consensus_1847#0 GTGGCTCGCATCATGGTGAAGCTCGGCATGTACGATCAGGCGGCAGACGCTATACGGCGC 302
consensus_1847#1 GTGGCTCGCATCATGGTGAAGCTCGGCATGTACGATCAGGCGGCAGACGCTATACGGCGC 420
************************************************************
consensus_1847#0 GAAATCGGGCTGCACCAGCAGGTCGGTTCGGAGGGTGCCATCGGCCGGCTAGCGGTGGCA 362
consensus_1847#1 GAAATCGGGCTGCACCAGCAGGTCGGTTCGGAGGGTGCCATCGGCCGGCTAGCGGTGGCA 480
************************************************************
consensus_1847#0 CTGGTGCTGGTGCAGCTCGCCCGTGGCGATTATGTGGCGGCGGAGAAAGCGTTCAAGGAG 422
consensus_1847#1 CTGGTGCTGGTGCAGCTCGCCCGTGGCGATTATGTGGCGGCGGAGAAAGCGTTCAAGGAG 540
************************************************************
consensus_1847#0 TGGGGCAACTGTTGCGATGCGGCCGAAGTGCAAACGCTGGAATCGTTGCTACAGGCGTAC 482
consensus_1847#1 TGGGGCAACTGTTGCGATGCGGCCGAAGTGCAAACGCTGGAATCGTTGCTACAGGCGTAC 600
************************************************************
consensus_1847#0 GATGATGAGGATCCGGAACTGGCCCAGCGAGCCCTGTCGTCACCGTTCATCCGGCACATG 542
consensus_1847#1 GATGATGAGGATCCGGAAC----------------------------------------- 619
*******************
consensus_1847#0 GATGTGGAGTATGCGCGGCTGGCGCGGGATTTACCCCTCCCCAAGGGCGTCTCGATTGCA 602
consensus_1847#1 ------------------------------------------------------------
consensus_1847#0 CCGAAAGCGAACGTCATCGAGAATGCGGCCGCTTCGTA 640
consensus_1847#1 --------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||