These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1900#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 291 fasta sequence [ATCGNCACGAGGTGTTAAGAGAACATCCATCTGCAGTCGANAGCTTGCCCGGGTTCCGAGTCGAGGTGGCACCATCAAGAAACATGATGATCTCGAACACGACCGGCAGCGGGTTCGGCGTTGACCGCCGCGCCAGTAGCCGCCAAATCGCGCCGGCACCGAAGACGACGGGTGCGAACGATGCTAGACGTGTTGAACCTAGTTCCTGTACAGAGGAGATAACTTGGCGAAGGACGACGATTTAGGAAGTTTGTCGCGTGTGAGTGGAGTTAAACCTCCCCAAGGGGGGTC] [+] EMBL BX469468 [ATCGNCACGAGGTGTTAAGAGAACATCCATCTGCAGTCGANAGCTTGCCCGGGTTCCGAGTCGAGGTGGCACCATCAAGAAACATGATGATCTCGAACACGACCGGCAGCGGGTTCGGCGTTGACCGCCGCGCCAGTAGCCGCCAAATCGCGCCGGCACCGAAGACGACGGGTGCGAACGATGCTAGACGTGTTGAACCTAGTTCCTGTACAGAGGAGATAACTTGGCGAAGGACGACGATTTAGGAAGTTTGTCGCGTGTGAGTGGAGTTAAACCTCCCCAAGGGGGGTC] consensusID : consensus_1900#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 177 fasta sequence [GATGGTAGCGGCGGTCGCGAAGATCACCTCCATCCCGGCGTCGGTCGTNATCAGCAAGAAGGCGGAAGAGAACATCCATCTGCAGTCGAAGCTGGCCCGGCTCGCAGTCCGNGGTGGCCACCATCAAGAACATGATGATCTCGNAACACGACCGGCAGCGGGTTCGGCGTNACCCGC] [+] EMBL BX619134 [GATGGTAGCGGCGGTCGCGAAGATCACCTCCATCCCGGCGTCGGTCGTNATCAGCAAGAAGGCGGAAGAGAACATCCATCTGCAGTCGAAGCTGGCCCGGCTCGCAGTCCGNGGTGGCCACCATCAAGAACATGATGATCTCGNAACACGACCGGCAGCGGGTTCGGCGTNACCCGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1900#0 -------------------------------------------------ATCGNCACGAG 11 consensus_1900#1 GATGGTAGCGGCGGTCGCGAAGATCACCTCCATCCCGGCGTCGGTCGTNATCAGCAAGAA 60 *** ** ** consensus_1900#0 GTGTTAAGAGAACATCCATCTGCAGTCGANAGCTTGCCCGGGTTCCGAGTCGAGGTGGC- 70 consensus_1900#1 GGCGGAAGAGAACATCCATCTGCAGTCGAA-GCTGGCCCGGCTCGCAGTCCGNGGTGGCC 119 * ************************ *** ****** * * ** ****** consensus_1900#0 ACCATCAAGAAACATGATGATCTCGAA-CACGACCGGCAGCGGGTTCGGCGTTGACCGCC 129 consensus_1900#1 ACCATCAAGAA-CATGATGATCTCGNAACACGACCGGCAGCGGGTTCGGCGTNACCCGC- 177 *********** ************* * ************************ **** consensus_1900#0 GCGCCAGTAGCCGCCAAATCGCGCCGGCACCGAAGACGACGGGTGCGAACGATGCTAGAC 189 consensus_1900#1 ------------------------------------------------------------ consensus_1900#0 GTGTTGAACCTAGTTCCTGTACAGAGGAGATAACTTGGCGAAGGACGACGATTTAGGAAG 249 consensus_1900#1 ------------------------------------------------------------ consensus_1900#0 TTTGTCGCGTGTGAGTGGAGTTAAACCTCCCCAAGGGGGGTC 291 consensus_1900#1 ------------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||