These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2030#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 641 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGCGCGCAGCCCCCACAGAACGCCTCGATGCGAGTACGTCGTGTGCGGGCAAACCGGAAAGCAACAAACCGATTTCTCGGCTGGTACGGCTCGCGGATATCGTAACAGCCCTGGCGGTCATCGACCGTGAGTGTACTGGTGCGGCCGGACCGATGGATCAACCCAAGTCCACCGGAACACGCGCCACCGGTGGCGGTGGCGGCGGCGGCGGCGGTGGCGGTGGTCGCGACAAACCCGACAAACAGCGGCAACAGCAGCAGCAGCAGCAGCAATCCCGCAAGGACAAGAAGGATAAGGGCGGCAAATCGGGCGGCTCGAAGCGCAACAAAAAGAACAAGAAGGATGCGCCGGCGCCCATGGACCCGGGTGGTGATACGCCGCCTACCGCCCACCATGACGGAGGCACTGTTCTGCGAGCAGATCGCGGTCGATGGGAAGCTGCCGGCGAACGATGAGTTTTACTTCGTCGGGCCGGACTGGACGCTCGGACAAAATGCGTCGTGCCGGGCGTACATCAACTTCACCAACCCGGCGGAACATCTTCCGGTTCACGGACAGCTACGACGGGTACACGTTCGTGGACAGCAAGGGCATGAAGTACCAGGCGGTGGTGGAG] [+] EMBL BM601779 [CCGCCCACGCGTCCGCCCACGCGTCCGCGCGCAGCCCCCACAGAACGCCTCGATGCGAGTACGTCGTGTGCGGGCAAACCGGAAAGCAACAAACCGATTTCTCGGCTGGTACGGCTCGCGGATATCGTAACAGCCCTGGCGGTCATCGACCGTGAGTGTACTGGTGCGGCCGGACCGATGGATCAACCCAAGTCCACCGGAACACGCGCCACCGGTGGCGGTGGCGGCGGCGGCGGCGGTGGCGGTGGTCGCGACAAACCCGACAAACAGCGGCAACAGCAGCAGCAGCAGCAGCAATCCCGCAAGGACAAGAAGGATAAGGGCGGCAAATCGGGCGGCTCGAAGCGCAACAAAAAGAACAAGAAGGATGCGCCGGCGCCCATGGACCCGGGTGGTGATACGCCGCCTACCGCCCACCATGACGGAGGCACTGTTCTGCGAGCAGATCGCGGTCGATGGGAAGCTGCCGGCGAACGATGAGTTTTACTTCGTCGGGCCGGACTGGACGCTCGGACAAAATGCGTCGTGCCGGGCGTACATCAACTTCACCAACCCGGCGGAACATCTTCCGGTTCACGGACAGCTACGACGGGTACACGTTCGTGGACAGCAAGGGCATGAAGTACCAGGCGGTGGTGGAG] consensusID : consensus_2030#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 465 fasta sequence [GCCCGTACTGATCGTCACCATTTTCACGCGCAGCCCCCACAGAACGCCTCGATGCGAGTACGTCGTGTGCGGGCAAACCGGAAAGCAACAAACCGATTTCTCGGCTGGTACGGCTCGCGGATATCGTAACAGCCCTGGCGGTCATCGACCGTGAGTGTACTGGTGCGGCCGGACCGATGGATCAACCCAAGTCCACCGGAACACGCGCCACCGGTGGCGGCGGCGGCGGCGGTGGCGGTGGTCGCGACAAACCCGATAAACAGCGGCAACAACAGCAGCAGCAGCAGCAGCAATCCCGCAAGGACAAGAAGGATAAGGGCGGCAAATCGGGCAGCTCGAAGCGCAACAAGCAAGAACAAGAAGGATGCGCCGGCGCCCATGACGCGGGTGGGTGATACGCCGCCTACCGCCCCACCATGACGGAGGCACTGTTCTGCGAGCAGATCGCGGTCGATGGGGNAAGCT] [+] EMBL BX619433 [GCCCGTACTGATCGTCACCATTTTCACGCGCAGCCCCCACAGAACGCCTCGATGCGAGTACGTCGTGTGCGGGCAAACCGGAAAGCAACAAACCGATTTCTCGGCTGGTACGGCTCGCGGATATCGTAACAGCCCTGGCGGTCATCGACCGTGAGTGTACTGGTGCGGCCGGACCGATGGATCAACCCAAGTCCACCGGAACACGCGCCACCGGTGGCGGCGGCGGCGGCGGTGGCGGTGGTCGCGACAAACCCGATAAACAGCGGCAACAACAGCAGCAGCAGCAGCAGCAATCCCGCAAGGACAAGAAGGATAAGGGCGGCAAATCGGGCAGCTCGAAGCGCAACAAGCAAGAACAAGAAGGATGCGCCGGCGCCCATGACGCGGGTGGGTGATACGCCGCCTACCGCCCCACCATGACGGAGGCACTGTTCTGCGAGCAGATCGCGGTCGATGGGGNAAGCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2030#0 CCGCCCACGC-GTCCGCCCACGCGTCCGCGCGCAGCCCCCACAGAACGCCTCGATGCGAG 59 consensus_2030#1 --GCCCGTACTGATCGTCACCATTTTCACGCGCAGCCCCCACAGAACGCCTCGATGCGAG 58 **** * * ** * * * * ******************************** consensus_2030#0 TACGTCGTGTGCGGGCAAACCGGAAAGCAACAAACCGATTTCTCGGCTGGTACGGCTCGC 119 consensus_2030#1 TACGTCGTGTGCGGGCAAACCGGAAAGCAACAAACCGATTTCTCGGCTGGTACGGCTCGC 118 ************************************************************ consensus_2030#0 GGATATCGTAACAGCCCTGGCGGTCATCGACCGTGAGTGTACTGGTGCGGCCGGACCGAT 179 consensus_2030#1 GGATATCGTAACAGCCCTGGCGGTCATCGACCGTGAGTGTACTGGTGCGGCCGGACCGAT 178 ************************************************************ consensus_2030#0 GGATCAACCCAAGTCCACCGGAACACGCGCCACCGGTGGCGGTGGCGGCGGCGGCGGCGG 239 consensus_2030#1 GGATCAACCCAAGTCCACCGGAACACGCGCCACCGGTGGCGG------CGGCGGCGGCGG 232 ****************************************** ************ consensus_2030#0 TGGCGGTGGTCGCGACAAACCCGACAAACAGCGGCAACA---GCAGCAGCAGCAGCAGCA 296 consensus_2030#1 TGGCGGTGGTCGCGACAAACCCGATAAACAGCGGCAACAACAGCAGCAGCAGCAGCAGCA 292 ************************ ************** ****************** consensus_2030#0 ATCCCGCAAGGACAAGAAGGATAAGGGCGGCAAATCGGGCGGCTCGAAGCGCAACAAA-A 355 consensus_2030#1 ATCCCGCAAGGACAAGAAGGATAAGGGCGGCAAATCGGGCAGCTCGAAGCGCAACAAGCA 352 **************************************** **************** * consensus_2030#0 AGAACAAGAAGGATGCGCCGGCGCCCATGGACCCGGGTGGTGATACGCCGCCTACCGCCC 415 consensus_2030#1 AGAACAAGAAGGATGCGCCGGCGCCCATGACGCGGGTGGGTGATACGCCGCCTACCGCCC 412 ***************************** * ** ********************** consensus_2030#0 -ACCATGACGGAGGCACTGTTCTGCGAGCAGATCGCGGTCGATGGG--AAGCTGCCGGCG 472 consensus_2030#1 CACCATGACGGAGGCACTGTTCTGCGAGCAGATCGCGGTCGATGGGGNAAGCT------- 465 ********************************************* ***** consensus_2030#0 AACGATGAGTTTTACTTCGTCGGGCCGGACTGGACGCTCGGACAAAATGCGTCGTGCCGG 532 consensus_2030#1 ------------------------------------------------------------ consensus_2030#0 GCGTACATCAACTTCACCAACCCGGCGGAACATCTTCCGGTTCACGGACAGCTACGACGG 592 consensus_2030#1 ------------------------------------------------------------ consensus_2030#0 GTACACGTTCGTGGACAGCAAGGGCATGAAGTACCAGGCGGTGGTGGAG 641 consensus_2030#1 ------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||