These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2032#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 645 fasta sequence [TCGCCCGAGGNTTAAGTTTGCTTCCTTCGCCCTGTGCGTCTTTTTGCCTGCCGTGTCAGTCACGGCGCAACTGTCGATGCGCGAGCTGGCCGAAATTACCGAAGACTATCGGGTGCGTTTCGACGAGCTGCACGAAGACAAGGAGGACTTCATTCGCCTTGCCCGCGTGCTGATCCGGGCCGAGCTGAAGGGCCTGAACGAGGCGACGCTGGTCAATCTCGGCAACGCTCGCAACGATATCGACGATATCCTGGCCGACACGCGCGAAGAGATTGCCAATGCCATTCTCGAACCGAACGCGAACGAACAGTGCCTGCTCGGACTGGTTGACCGGGTGATTGAGGAGGGCCGTCGTGCCGGCGAGGGCATGAGCTCCTGTGCCGCCGACAAGATCCAGATCAAGGAGGGACTGGGCGATGAGTTCCGAGCGCTAACCAACACGCTGCAGCGCATTGCTACCGCTGCGTCCGAGTACACGCTGTACACGTTCGCCATTCACAACTCGTTCACCGATCCGGAGGAGCACGATGGAGTGGCTGGAGGAGAACTTCGCCAACCAGGTCGAGTTACTGGGACAATGTGGCCGCGCCCGGAAGCGCAGGAAGATCTGGACAATCTGGAAATCAACGCCCGGCACTGGTGGAG] [+] EMBL AL695741 [TCGCCCGAGGNTTAAGTTTGCTTCCTTCGCCCTGTGCGTCTTTTTGCCTGCCGTGTCAGTCACGGCGCAACTGTCGATGCGCGAGCTGGCCGAAATTACCGAAGACTATCGGGTGCGTTTCGACGAGCTGCACGAAGACAAGGAGGACTTCATTCGCCTTGCCCGCGTGCTGATCCGGGCCGAGCTGAAGGGCCTGAACGAGGCGACGCTGGTCAATCTCGGCAACGCTCGCAACGATATCGACGATATCCTGGCCGACACGCGCGAAGAGATTGCCAATGCCATTCTCGAACCGAACGCGAACGAACAGTGCCTGCTCGGACTGGTTGACCGGGTGATTGAGGAGGGCCGTCGTGCCGGCGAGGGCATGAGCTCCTGTGCCGCCGACAAGATCCAGATCAAGGAGGGACTGGGCGATGAGTTCCGAGCGCTAACCAACACGCTGCAGCGCATTGCTACCGCTGCGTCCGAGTACACGCTGTACACGTTCGCCATTCACAACTCGTTCACCGATCCGGAGGAGCACGATGGAGTGGCTGGAGGAGAACTTCGCCAACCAGGTCGAGTTACTGGGACAATGTGGCCGCGCCCGGAAGCGCAGGAAGATCTGGACAATCTGGAAATCAACGCCCGGCACTGGTGGAG] consensusID : consensus_2032#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 382 fasta sequence [GATCGCCGAGGTTACTAAAACCCCCCGGTTTCGGTTTCGGCTGCTCGACGTGACAAAAAGATGAAAACGTTTGCTTCCTTCGCCCTGTGCGTCCTTTTTGCCGCCGTGTCAGTCACGGCGCAACTGTCGATGCGCGAGCTGGCCGAAATTACCGAAGACTATCGGGTGCGTTTCGACGAGCTGCACGAAGACAAGGAGGACTTCATTCGCCTTGCCCGCGTGCTGATCCGGGCCGAGCTGAAGGGCCTGAACGAGGCGACGCTGGTCAATCTCGGCAACGCTCGCAACGATATCGACGATATCCTGGCCGACACGCGCGAAGAGATTTGCCAATGCCATTCTCGAACCGAAACGCGAACGAACAGTGCCTGCTCGGACTGGT] [+] EMBL AL695342 [GATCGCCGAGGTTACTAAAACCCCCCGGTTTCGGTTTCGGCTGCTCGACGTGACAAAAAGATGAAAACGTTTGCTTCCTTCGCCCTGTGCGTCCTTTTTGCCGCCGTGTCAGTCACGGCGCAACTGTCGATGCGCGAGCTGGCCGAAATTACCGAAGACTATCGGGTGCGTTTCGACGAGCTGCACGAAGACAAGGAGGACTTCATTCGCCTTGCCCGCGTGCTGATCCGGGCCGAGCTGAAGGGCCTGAACGAGGCGACGCTGGTCAATCTCGGCAACGCTCGCAACGATATCGACGATATCCTGGCCGACACGCGCGAAGAGATTTGCCAATGCCATTCTCGAACCGAAACGCGAACGAACAGTGCCTGCTCGGACTGGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2032#0 --------------------------------------------------TCGCCCGAGG 10 consensus_2032#1 GATCGCCGAGGTTACTAAAACCCCCCGGTTTCGGTTTCGGCTGCTCGACGTGACAAAAAG 60 * * * * consensus_2032#0 NTTAA---GTTTGCTTCCTTCGCCCTGTGCGTCTTTTTGCCTGCCGTGTCAGTCACGGCG 67 consensus_2032#1 ATGAAAACGTTTGCTTCCTTCGCCCTGTGCGTCCTTTTTGCCGCCGTGTCAGTCACGGCG 120 * ** ************************* **** * ****************** consensus_2032#0 CAACTGTCGATGCGCGAGCTGGCCGAAATTACCGAAGACTATCGGGTGCGTTTCGACGAG 127 consensus_2032#1 CAACTGTCGATGCGCGAGCTGGCCGAAATTACCGAAGACTATCGGGTGCGTTTCGACGAG 180 ************************************************************ consensus_2032#0 CTGCACGAAGACAAGGAGGACTTCATTCGCCTTGCCCGCGTGCTGATCCGGGCCGAGCTG 187 consensus_2032#1 CTGCACGAAGACAAGGAGGACTTCATTCGCCTTGCCCGCGTGCTGATCCGGGCCGAGCTG 240 ************************************************************ consensus_2032#0 AAGGGCCTGAACGAGGCGACGCTGGTCAATCTCGGCAACGCTCGCAACGATATCGACGAT 247 consensus_2032#1 AAGGGCCTGAACGAGGCGACGCTGGTCAATCTCGGCAACGCTCGCAACGATATCGACGAT 300 ************************************************************ consensus_2032#0 ATCCTGGCCGACACGCGCGAAGAGATT-GCCAATGCCATTCTCGAACCGAA-CGCGAACG 305 consensus_2032#1 ATCCTGGCCGACACGCGCGAAGAGATTTGCCAATGCCATTCTCGAACCGAAACGCGAACG 360 *************************** *********************** ******** consensus_2032#0 AACAGTGCCTGCTCGGACTGGTTGACCGGGTGATTGAGGAGGGCCGTCGTGCCGGCGAGG 365 consensus_2032#1 AACAGTGCCTGCTCGGACTGGT-------------------------------------- 382 ********************** consensus_2032#0 GCATGAGCTCCTGTGCCGCCGACAAGATCCAGATCAAGGAGGGACTGGGCGATGAGTTCC 425 consensus_2032#1 ------------------------------------------------------------ consensus_2032#0 GAGCGCTAACCAACACGCTGCAGCGCATTGCTACCGCTGCGTCCGAGTACACGCTGTACA 485 consensus_2032#1 ------------------------------------------------------------ consensus_2032#0 CGTTCGCCATTCACAACTCGTTCACCGATCCGGAGGAGCACGATGGAGTGGCTGGAGGAG 545 consensus_2032#1 ------------------------------------------------------------ consensus_2032#0 AACTTCGCCAACCAGGTCGAGTTACTGGGACAATGTGGCCGCGCCCGGAAGCGCAGGAAG 605 consensus_2032#1 ------------------------------------------------------------ consensus_2032#0 ATCTGGACAATCTGGAAATCAACGCCCGGCACTGGTGGAG 645 consensus_2032#1 ---------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||