These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2079#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 660 fasta sequence [CCGGACCCGCTAAGATGAGAACAAGATAATTGAGGCAGATTTTCTTAGCTATCTTGGCACAGAAAGGATGACGAAGAGCGCGCCTCATCCAAGACTGGAGTTACGTAAGAACCGTGAATTTTAACGCAAATTTAGCGAATGAACAAGTAACAACTTCTACGTGTGTGGTGGCAAATGTTAGGCATCCTCGCATTTGTTTAAAACTGTCCCGTGGGTTTTGTATGAATATGAGTTAGATTGTCCTTTGTATGAAATATGCTAACTTTTTTTTGCATCAAAAGTTGCATAAACAATTTTTAAATTGGAATTAGCTGAACAGATCATGTTTAAACGTATTATAATTAATTATACGAAATACTTAGTAAAATATTTTCCTTTAATGGATATTCTGAGCAAAATTGGTTCCTTCTTGGTAATGCTTGAATTATATTTTTCAATATTCAAAAATGTTATTGGAGCATAAAGCATAGAGGTGAATCGTGTTTTGCTAAGCGGAAAAAATACCATTACAGTAGAAAAAGGATTTTTTGGCTCTAATTATGTTCGTTCATACTAACAGGATCGCGGATATATGCAACACATCCCGTTGAACTATTAAGCATGCAGTTGTACATTCATGAAGTGGTGGGATAGAACACCTAACTGAATGGGTTTTAGATG] [+] EMBL BM651574 [CCGGACCCGCTAAGATGAGAACAAGATAATTGAGGCAGATTTTCTTAGCTATCTTGGCACAGAAAGGATGACGAAGAGCGCGCCTCATCCAAGACTGGAGTTACGTAAGAACCGTGAATTTTAACGCAAATTTAGCGAATGAACAAGTAACAACTTCTACGTGTGTGGTGGCAAATGTTAGGCATCCTCGCATTTGTTTAAAACTGTCCCGTGGGTTTTGTATGAATATGAGTTAGATTGTCCTTTGTATGAAATATGCTAACTTTTTTTTGCATCAAAAGTTGCATAAACAATTTTTAAATTGGAATTAGCTGAACAGATCATGTTTAAACGTATTATAATTAATTATACGAAATACTTAGTAAAATATTTTCCTTTAATGGATATTCTGAGCAAAATTGGTTCCTTCTTGGTAATGCTTGAATTATATTTTTCAATATTCAAAAATGTTATTGGAGCATAAAGCATAGAGGTGAATCGTGTTTTGCTAAGCGGAAAAAATACCATTACAGTAGAAAAAGGATTTTTTGGCTCTAATTATGTTCGTTCATACTAACAGGATCGCGGATATATGCAACACATCCCGTTGAACTATTAAGCATGCAGTTGTACATTCATGAAGTGGTGGGATAGAACACCTAACTGAATGGGTTTTAGATG] consensusID : consensus_2079#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 371 fasta sequence [CCGCTTTTTTTTGCATCAAAAGTTGCATAAACAATTTTTAAATTGGAATTAGCTGAACAGATAATGTTCTTAGTAAAATATTTTCCTTTAATGGATATTCTGAGCAAAATTGGTTCCTTCTTGGTAATGCTTGAATTATATTTTTCAATATTCAAAAATGTTATTGGAGCATAAAGCATAGAGGTGAATCGTGTTTTGCTAAGCGGAAAAAATACCATTACAGTAGAAAAAGGATTTTTTGGCTCTAATTATGTTCGTTCATACTAACAGGATCGCGGATATATGCAACACATCCCGTTGAACTATTAAGCATGCAGTTGTACATTCATGAAGTGGTGGGATAGAACACCTAACTGAATGGGTTTTAGATG] [+] EMBL BM635772 [CCGCTTTTTTTTGCATCAAAAGTTGCATAAACAATTTTTAAATTGGAATTAGCTGAACAGATAATGTTCTTAGTAAAATATTTTCCTTTAATGGATATTCTGAGCAAAATTGGTTCCTTCTTGGTAATGCTTGAATTATATTTTTCAATATTCAAAAATGTTATTGGAGCATAAAGCATAGAGGTGAATCGTGTTTTGCTAAGCGGAAAAAATACCATTACAGTAGAAAAAGGATTTTTTGGCTCTAATTATGTTCGTTCATACTAACAGGATCGCGGATATATGCAACACATCCCGTTGAACTATTAAGCATGCAGTTGTACATTCATGAAGTGGTGGGATAGAACACCTAACTGAATGGGTTTTAGATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2079#0 CCGGACCCGCTAAGATGAGAACAAGATAATTGAGGCAGATTTTCTTAGCTATCTTGGCAC 60 consensus_2079#1 ------------------------------------------------------------ consensus_2079#0 AGAAAGGATGACGAAGAGCGCGCCTCATCCAAGACTGGAGTTACGTAAGAACCGTGAATT 120 consensus_2079#1 ------------------------------------------------------------ consensus_2079#0 TTAACGCAAATTTAGCGAATGAACAAGTAACAACTTCTACGTGTGTGGTGGCAAATGTTA 180 consensus_2079#1 ------------------------------------------------------------ consensus_2079#0 GGCATCCTCGCATTTGTTTAAAACTGTCCCGTGGGTTTTGTATGAATATGAGTTAGATTG 240 consensus_2079#1 ------------------------------------------------------------ consensus_2079#0 TCCTTTGTATGAAATATGCTAACTTTTTTTTGCATCAAAAGTTGCATAAACAATTTTTAA 300 consensus_2079#1 -------------------CCGCTTTTTTTTGCATCAAAAGTTGCATAAACAATTTTTAA 41 ************************************** consensus_2079#0 ATTGGAATTAGCTGAACAGATCATGTTTAAACGTATTATAATTAATTATACGAAATACTT 360 consensus_2079#1 ATTGGAATTAGCTGAACAGATAATGTT------------------------------CTT 71 ********************* ***** *** consensus_2079#0 AGTAAAATATTTTCCTTTAATGGATATTCTGAGCAAAATTGGTTCCTTCTTGGTAATGCT 420 consensus_2079#1 AGTAAAATATTTTCCTTTAATGGATATTCTGAGCAAAATTGGTTCCTTCTTGGTAATGCT 131 ************************************************************ consensus_2079#0 TGAATTATATTTTTCAATATTCAAAAATGTTATTGGAGCATAAAGCATAGAGGTGAATCG 480 consensus_2079#1 TGAATTATATTTTTCAATATTCAAAAATGTTATTGGAGCATAAAGCATAGAGGTGAATCG 191 ************************************************************ consensus_2079#0 TGTTTTGCTAAGCGGAAAAAATACCATTACAGTAGAAAAAGGATTTTTTGGCTCTAATTA 540 consensus_2079#1 TGTTTTGCTAAGCGGAAAAAATACCATTACAGTAGAAAAAGGATTTTTTGGCTCTAATTA 251 ************************************************************ consensus_2079#0 TGTTCGTTCATACTAACAGGATCGCGGATATATGCAACACATCCCGTTGAACTATTAAGC 600 consensus_2079#1 TGTTCGTTCATACTAACAGGATCGCGGATATATGCAACACATCCCGTTGAACTATTAAGC 311 ************************************************************ consensus_2079#0 ATGCAGTTGTACATTCATGAAGTGGTGGGATAGAACACCTAACTGAATGGGTTTTAGATG 660 consensus_2079#1 ATGCAGTTGTACATTCATGAAGTGGTGGGATAGAACACCTAACTGAATGGGTTTTAGATG 371 ************************************************************ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||