These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2086#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 633 fasta sequence [CCGACAGATTACGCCGTACCGACAGTGTGTGTATCCTGCCGTGGCTTCAGGCTTCAAAAGTTCAAACCCACAAAAACCAAATCAATCCCCCAGGAAAACAAAAGTAAACCATCAAAGCAATCGACGGTGGGGAAGACAGTAACAGTGCGTCTACCGCGGAGTCCGCAGTCGGAGAAGGTTTTTGACACATACGCACCCAAACGCCGTATAGTGTGTTACGTCAGCTGAATGAGTGAGTGGAAAGGAGAAAAAACCAACAGCAACAACAACAGAAAGGAAAATCCAAATTTTGCCGGTTCAAAAGCAGAAGCAACATTTAAGAGAAACGGTACCTAATTCTGCACTGAAAACAGTGCTCTAGTGCTCTAGGTGAAGTTTACAAACGTAAATAATATTGTGCAAGTTTCTGTGTGAGTGCATCAGTGGTCCTTAAAAAAATACCACCCAAACCGCCCAAGGTTGTGGCCGACAAGTGACGAAGAAGCGAGAGGCATCTTCTTGGAAGAATGTTTGTGAAGGAAGAAAAACGGTGCTAAAATTGCAAATGCAAGCATCCGAGCGTGAAAGGCATCGGAACGCCAGTTCTTGGGCCAGTATATCCTGGTGACCCGATTTAAAACCGAGCGCCCCTGT] [+] EMBL BM591246 [CCGACAGATTACGCCGTACCGACAGTGTGTGTATCCTGCCGTGGCTTCAGGCTTCAAAAGTTCAAACCCACAAAAACCAAATCAATCCCCCAGGAAAACAAAAGTAAACCATCAAAGCAATCGACGGTGGGGAAGACAGTAACAGTGCGTCTACCGCGGAGTCCGCAGTCGGAGAAGGTTTTTGACACATACGCACCCAAACGCCGTATAGTGTGTTACGTCAGCTGAATGAGTGAGTGGAAAGGAGAAAAAACCAACAGCAACAACAACAGAAAGGAAAATCCAAATTTTGCCGGTTCAAAAGCAGAAGCAACATTTAAGAGAAACGGTACCTAATTCTGCACTGAAAACAGTGCTCTAGTGCTCTAGGTGAAGTTTACAAACGTAAATAATATTGTGCAAGTTTCTGTGTGAGTGCATCAGTGGTCCTTAAAAAAATACCACCCAAACCGCCCAAGGTTGTGGCCGACAAGTGACGAAGAAGCGAGAGGCATCTTCTTGGAAGAATGTTTGTGAAGGAAGAAAAACGGTGCTAAAATTGCAAATGCAAGCATCCGAGCGTGAAAGGCATCGGAACGCCAGTTCTTGGGCCAGTATATCCTGGTGACCCGATTTAAAACCGAGCGCCCCTGT] consensusID : consensus_2086#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 613 fasta sequence [CCGCCCACGCGTCCGCAAATCTTCCGACCGGACGGTGTGCGTGCTTTGGGTTCGTCCCGCTGGTTTGTGGCAGATGACACTTGTGACTTCGCGATCGCGCAAACTGTTTCGAAAAAGGACGCACGGCCCCAATCGTTTCCATTGCGCTGTGCAAAGGTTCCCAGGAGAAATAAAAAAATAACCGTATAGTGTGTTACGTCAGCTGAATGAGTGAGTGGAAAGGAGAAAAAACCAACAGCAACAACAACAGAAAGGAAAATCCAAATTTTGCCGGTTCAAAAGCAGAAGCAACATTTAAGAGAAACGGTACCTAATTCTGCACTGAAAACAGTGCTCTAGTGCTCTAGGTGAAGTTTACAAACGTAAATAATATTGTGCAAGTTTCTGTGTGAGTGCATCAGTGGTCCTTAAAAAAATACCACCCAAACCGCCCAAGGTTGTGGCCGACAAGTGACGAAGAAGCGAGAGGCATCTTCTTGGAAGAATGTTTGTGAAGGAAGAAAAACGGTGCTAAAATTGCAAATGCAAGCATCCGAGCGTGAAAGGCATCGGAAACGCCAGTTCTTGGGCCAGTATATCCTGGTGACCCGATTTAAAACCGAGCGCCCCTGTA] [+] EMBL BM651856 [CCGCCCACGCGTCCGCAAATCTTCCGACCGGACGGTGTGCGTGCTTTGGGTTCGTCCCGCTGGTTTGTGGCAGATGACACTTGTGACTTCGCGATCGCGCAAACTGTTTCGAAAAAGGACGCACGGCCCCAATCGTTTCCATTGCGCTGTGCAAAGGTTCCCAGGAGAAATAAAAAAATAACCGTATAGTGTGTTACGTCAGCTGAATGAGTGAGTGGAAAGGAGAAAAAACCAACAGCAACAACAACAGAAAGGAAAATCCAAATTTTGCCGGTTCAAAAGCAGAAGCAACATTTAAGAGAAACGGTACCTAATTCTGCACTGAAAACAGTGCTCTAGTGCTCTAGGTGAAGTTTACAAACGTAAATAATATTGTGCAAGTTTCTGTGTGAGTGCATCAGTGGTCCTTAAAAAAATACCACCCAAACCGCCCAAGGTTGTGGCCGACAAGTGACGAAGAAGCGAGAGGCATCTTCTTGGAAGAATGTTTGTGAAGGAAGAAAAACGGTGCTAAAATTGCAAATGCAAGCATCCGAGCGTGAAAGGCATCGGAAACGCCAGTTCTTGGGCCAGTATATCCTGGTGACCCGATTTAAAACCGAGCGCCCCTGTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2086#0 CCGACAGATTACGCCGTACCGACAGTGTGTGTATCCTGCCGTGGCTTCAGGCTTCAAAAG 60 consensus_2086#1 -------------CCGC-CCACGCGTCCGCAAATCTTCCGACCGGAC--GGTGTGCGTGC 44 *** ** ** * *** * * * ** * consensus_2086#0 TTCAAACCCACAAAAACCAAATCAATCCCCCAGGAAAACAAAAGTAAACCATCAAAGCAA 120 consensus_2086#1 TTTGGGTTCGT-----CCCGCTGGTTTGTGGCAGATGACACTTGTGACTTCGCGATCGCG 99 ** * ** * * ** *** ** * * * consensus_2086#0 TCGACGGTGGGGAAGACAGTAACAGTGCGTCTACCGCGGAGTCCGCAGTCGGAGAAGGTT 180 consensus_2086#1 CAAACTGTTTCGAAAAAGGACGCACGGCCCCAATCGTTTCCATTGCGCTGTGCAAAGGTT 159 ** ** *** * * ** ** * * ** ** * * ****** consensus_2086#0 TTTGACACATACGCACCCAAACGCCGTATAGTGTGTTACGTCAGCTGAATGAGTGAGTGG 240 consensus_2086#1 CCCAGGAGAAATAAAAA-AATAACCGTATAGTGTGTTACGTCAGCTGAATGAGTGAGTGG 218 * * * * ** ************************************* consensus_2086#0 AAAGGAGAAAAAACCAACAGCAACAACAACAGAAAGGAAAATCCAAATTTTGCCGGTTCA 300 consensus_2086#1 AAAGGAGAAAAAACCAACAGCAACAACAACAGAAAGGAAAATCCAAATTTTGCCGGTTCA 278 ************************************************************ consensus_2086#0 AAAGCAGAAGCAACATTTAAGAGAAACGGTACCTAATTCTGCACTGAAAACAGTGCTCTA 360 consensus_2086#1 AAAGCAGAAGCAACATTTAAGAGAAACGGTACCTAATTCTGCACTGAAAACAGTGCTCTA 338 ************************************************************ consensus_2086#0 GTGCTCTAGGTGAAGTTTACAAACGTAAATAATATTGTGCAAGTTTCTGTGTGAGTGCAT 420 consensus_2086#1 GTGCTCTAGGTGAAGTTTACAAACGTAAATAATATTGTGCAAGTTTCTGTGTGAGTGCAT 398 ************************************************************ consensus_2086#0 CAGTGGTCCTTAAAAAAATACCACCCAAACCGCCCAAGGTTGTGGCCGACAAGTGACGAA 480 consensus_2086#1 CAGTGGTCCTTAAAAAAATACCACCCAAACCGCCCAAGGTTGTGGCCGACAAGTGACGAA 458 ************************************************************ consensus_2086#0 GAAGCGAGAGGCATCTTCTTGGAAGAATGTTTGTGAAGGAAGAAAAACGGTGCTAAAATT 540 consensus_2086#1 GAAGCGAGAGGCATCTTCTTGGAAGAATGTTTGTGAAGGAAGAAAAACGGTGCTAAAATT 518 ************************************************************ consensus_2086#0 GCAAATGCAAGCATCCGAGCGTGAAAGGCATCGGAA-CGCCAGTTCTTGGGCCAGTATAT 599 consensus_2086#1 GCAAATGCAAGCATCCGAGCGTGAAAGGCATCGGAAACGCCAGTTCTTGGGCCAGTATAT 578 ************************************ *********************** consensus_2086#0 CCTGGTGACCCGATTTAAAACCGAGCGCCCCTGT- 633 consensus_2086#1 CCTGGTGACCCGATTTAAAACCGAGCGCCCCTGTA 613 ********************************** |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||