These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2100#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 486 fasta sequence [GTGTGTGTGTTGGAGAAACAATCGTTTTGCTACAGACGGAGTTTTTTTGCGAAACGTTGAATCCGATGGTAGTACAATCAAACAAACACAGAGAGAAAGAGAGACAGCTAGGGGCGAAAGCAAGTGGTGTCACACGTTTACTTAATCGAACTGCAGCGAATGCGGGTTTTTGTCTTATGAAAAATGGCACATTCTCTTTCTGTGGAGAGCAGTATTGCAAAGTCGATGTGTATGTGTGTGCGTGTGTGTGTGTGTGTCATTACTTTCGTTGAAATGCGATTGATTGCGTCCGGTTTGGTGAGGGTGCGTGATGAAAATCAAAAGAGAGCGGAAGACACAGGGCGAACAAAAACTCAAGTGCAATCACCATCGCTCCCACAAACCCACACAGCCACAAACACACACACACACTCAATTACATATATTCCACCACCTCACTGTGCATGGGGTGGAGCCGCCCGGTCGTGCCATGTTGTGTTGTGTGAG] [+] EMBL CNS09ONN [GTGTGTGTGTTGGAGAAACAATCGTTTTGCTACAGACGGAGTTTTTTTGCGAAACGTTGAATCCGATGGTAGTACAATCAAACAAACACAGAGAGAAAGAGAGACAGCTAGGGGCGAAAGCAAGTGGTGTCACACGTTTACTTAATCGAACTGCAGCGAATGCGGGTTTTTGTCTTATGAAAAATGGCACATTCTCTTTCTGTGGAGAGCAGTATTGCAAAGTCGATGTGTATGTGTGTGCGTGTGTGTGTGTGTGTCATTACTTTCGTTGAAATGCGATTGATTGCGTCCGGTTTGGTGAGGGTGCGTGATGAAAATCAAAAGAGAGCGGAAGACACAGGGCGAACAAAAACTCAAGTGCAATCACCATCGCTCCCACAAACCCACACAGCCACAAACACACACACACACTCAATTACATATATTCCACCACCTCACTGTGCATGGGGTGGAGCCGCCCGGTCGTGCCATGTTGTGTTGTGTGAG] consensusID : consensus_2100#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 307 fasta sequence [GAGGTNTTAACACACACNCAGNAANCGAGCAGACACGCTAGGGGCGAACAGAAGCTGGCTGTCCGCCACGTATTACTCTAATCAAACTGCAGCGAATGCGGGTTTTTGTCTCATGAAAAACTGGCACATTCTCTTTCTGTGGAGAGCAGTATTGCAAAATCCATGTGTATGCTGTGTGCGTAGTGCTGTGTGTAGTAATTACTNTTCGATGAACATGCGACTTGACTTGCGTCCGGTNTCGGGTGAGGGTGCGCTGATGANAAATCAACATAGAGAACGGAGGACACAGGGCGAACAANAAACACAA] [+] EMBL AL695759 [GAGGTNTTAACACACACNCAGNAANCGAGCAGACACGCTAGGGGCGAACAGAAGCTGGCTGTCCGCCACGTATTACTCTAATCAAACTGCAGCGAATGCGGGTTTTTGTCTCATGAAAAACTGGCACATTCTCTTTCTGTGGAGAGCAGTATTGCAAAATCCATGTGTATGCTGTGTGCGTAGTGCTGTGTGTAGTAATTACTNTTCGATGAACATGCGACTTGACTTGCGTCCGGTNTCGGGTGAGGGTGCGCTGATGANAAATCAACATAGAGAACGGAGGACACAGGGCGAACAANAAACACAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2100#0 GTGTGTGTGTTGGAGAAACAATCGTTTTGCTACAGACGGAGTTTTTTTGCGAAACGTTGA 60 consensus_2100#1 ------------------------------------------------------------ consensus_2100#0 ATCCGATGGTAGTACAATCAAACAAACACAGAGAGAAAGAG-AGACA-GCTAGGGGCGAA 118 consensus_2100#1 ------------GAGGTNTTAACACACACNCAGNAANCGAGCAGACACGCTAGGGGCGAA 48 * **** **** ** * *** ***** ************ consensus_2100#0 AGCAAGTGG------TGTCACACGTTTACTTAATCGAACTGCAGCGAATGCGGGTTTTTG 172 consensus_2100#1 CAGAAGCTGGCTGTCCGCCACGTATTACTCTAATCAAACTGCAGCGAATGCGGGTTTTTG 108 *** * * *** ** ***** ************************ consensus_2100#0 TCTTATGAAAAA-TGGCACATTCTCTTTCTGTGGAGAGCAGTATTGCAAAGTCGATGTGT 231 consensus_2100#1 TCTCATGAAAAACTGGCACATTCTCTTTCTGTGGAGAGCAGTATTGCAAAATCCATGTGT 168 *** ******** ************************************* ** ****** consensus_2100#0 ATG-TGTGTGCGTGTGTGTGTGTGT-GTCATTACTTT-CGTTGAA-ATGCGA-TTGA-TT 285 consensus_2100#1 ATGCTGTGTGCGTAGTGCTGTGTGTAGTAATTACTNTTCGATGAACATGCGACTTGACTT 228 *** ********* ******* ** ****** * ** **** ****** **** ** consensus_2100#0 GCGTCCGGTTT--GGTGAGGGTGCG-TGATGAAAATCAAA---AGAGAGCGGAAGACACA 339 consensus_2100#1 GCGTCCGGTNTCGGGTGAGGGTGCGCTGATGANAAATCAACATAGAGAACGGAGGACACA 288 ********* * ************ ****** ** ** ***** **** ****** consensus_2100#0 GGGCGAACAAAAA-CTCAAGTGCAATCACCATCGCTCCCACAAACCCACACAGCCACAAA 398 consensus_2100#1 GGGCGAACAANAAACACAA----------------------------------------- 307 ********** ** * *** consensus_2100#0 CACACACACACACTCAATTACATATATTCCACCACCTCACTGTGCATGGGGTGGAGCCGC 458 consensus_2100#1 ------------------------------------------------------------ consensus_2100#0 CCGGTCGTGCCATGTTGTGTTGTGTGAG 486 consensus_2100#1 ---------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||