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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2199#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1125 fasta sequence
[ANCACCAGCAGATACCCGCTTTAGCACAGAAATTTTATCCCCAAAATAACTCTTCCGTACGCGCATGCAGTGGACGAGCGTTTGTGTTGAGCCGTTCGAACTGTTGTCTATTGACCGGGGACTAGAATCAAGTGTATTGTGTGCTGNACTAACGGACGGGGCCGTGATTTTTATTCCTTTCTTGGAAGCAAACGAAATATTAAAACATCATCCAACGGAAAGGACCATGGCGAAACAGTGAAGCCAATCTTGGACCACAACCAGGAACGGGGCAGNCAGGAACCCAGGATTGTAATGCAAGGATTACCGGGCTGCTGGAAAAGGTTCAAACGGCATTCGGAGCCAGCCCCTAAGACTTAATNTGGTCCAGACTNTTGGGGNCACAAGCACTGTGTGCACACAATTGNANACAAAGGCCCTCGGGTACTTCACAAAAATTNCCAACGTTCCTAACGTTANTCTNCGGTTGGTTCCCGGACTTAATATATTCTTAAGGGAACACCTTGGCNGGCCCACAAGGTGGAAGGTATCTTCAAAGCGGATTGGGTGAACCNGCAACAAAANGGGCACACCATTGGCCCCATACCTGGCATTCCTCGGGGGNATTGACAAAGGACAAAACCTTTACCAGGCACCTTCCCAAAAGNATATGGTAGGGCCGACANACTATCCGCAACAGGNACACTTCAANCATNTACAACCNGAATACACAAAGAGAAAGCGGAATTACTTGAACACGGAAAGAAAGACCANGTGCCTNAAACATAACCAGTAANNATTGTNACCNTGATCCCCGTCACACAANAGCAANACACNGCAAACCCGCACAAAACANCCGCCAACCCGAGAATAGGGGGACNCCGCNCCACCAAACAAAGGCCCTNAAGAACCCCCGNGAAACNCCANACAAAGACAGACNCACACCCACCNAAAACCACNCGCCAANGAACNNAACAACANGACATAAACGGGACCACACGNACGAGAAACCCAANAACACGACACTGNCCGGAACCAACACCANCCGCACNACCCGGACCATAAAAACGCGCCCNACNCNAACCNCGACAGAGCAACGCACGNANCNCNACACACAGACACGACAAANNCGCGCANACCAGCCCA]
[+] EMBL AL696486 [ANCACCAGCAGATACCCGCTTTAGCACAGAAATTTTATCCCCAAAATAACTCTTCCGTACGCGCATGCAGTGGACGAGCGTTTGTGTTGAGCCGTTCGAACTGTTGTCTATTGACCGGGGACTAGAATCAAGTGTATTGTGTGCTGNACTAACGGACGGGGCCGTGATTTTTATTCCTTTCTTGGAAGCAAACGAAATATTAAAACATCATCCAACGGAAAGGACCATGGCGAAACAGTGAAGCCAATCTTGGACCACAACCAGGAACGGGGCAGNCAGGAACCCAGGATTGTAATGCAAGGATTACCGGGCTGCTGGAAAAGGTTCAAACGGCATTCGGAGCCAGCCCCTAAGACTTAATNTGGTCCAGACTNTTGGGGNCACAAGCACTGTGTGCACACAATTGNANACAAAGGCCCTCGGGTACTTCACAAAAATTNCCAACGTTCCTAACGTTANTCTNCGGTTGGTTCCCGGACTTAATATATTCTTAAGGGAACACCTTGGCNGGCCCACAAGGTGGAAGGTATCTTCAAAGCGGATTGGGTGAACCNGCAACAAAANGGGCACACCATTGGCCCCATACCTGGCATTCCTCGGGGGNATTGACAAAGGACAAAACCTTTACCAGGCACCTTCCCAAAAGNATATGGTAGGGCCGACANACTATCCGCAACAGGNACACTTCAANCATNTACAACCNGAATACACAAAGAGAAAGCGGAATTACTTGAACACGGAAAGAAAGACCANGTGCCTNAAACATAACCAGTAANNATTGTNACCNTGATCCCCGTCACACAANAGCAANACACNGCAAACCCGCACAAAACANCCGCCAACCCGAGAATAGGGGGACNCCGCNCCACCAAACAAAGGCCCTNAAGAACCCCCGNGAAACNCCANACAAAGACAGACNCACACCCACCNAAAACCACNCGCCAANGAACNNAACAACANGACATAAACGGGACCACACGNACGAGAAACCCAANAACACGACACTGNCCGGAACCAACACCANCCGCACNACCCGGACCATAAAAACGCGCCCNACNCNAACCNCGACAGAGCAACGCACGNANCNCNACACACAGACACGACAAANNCGCGCANACCAGCCCA]
consensusID : consensus_2199#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 656 fasta sequence
[CCGCTGAATGCTGCGCACAGCAAAATTTTATCCAAAATAACCTCTTCCGACCGTGCAGTGCAGTGGGCGAGCGTTTGTGTTGAGCCGTTCGAACTGTTGTCTATTGACCGGCACTAGGAATCAAGTGTATAGTGTGCTGTACTACCGCACGGGGTCGTGATTTTTATTCCTTTCTGCAAGCAAAAGCAATATTAAAACATCATCAAACGAAGCGACATGGCAAACAGTGAAGCAATTCTGGACACACAGACGGCCACCCAGACCCAGATGACGCAAGATACGGCGCTGGAAAGTCAACCGATCGAGCACCCTAGCTATGGCCAGCTGCTGGGCAAGCATGTGAAAATGAAAAGCCTCGACCTGCGCCACAGTGAGTTTAAGGTGGGACGAGAAGGCACATGCCATCTGATCTTGGATGAAGACAACCTTCCGCCCTCCAAGTTGTGCCGAATTTCGAAGCACCACTTCACGATCAAGAAGGATCTGAACGACACAACCAGCCCTACCTACATACATGACCATTCCCGAAACGGAACGTACGTAAACGGGCGACTGATTGGGCCGAACAAATGCATGATCCTGCAAGCACAACGATATCATCTCGATCGCGGGCGTCAGCATACGGGCCTTCGTGTACTACGATCTGCGGTACAGCA]
[+] EMBL BM602168 [CCGCTGAATGCTGCGCACAGCAAAATTTTATCCAAAATAACCTCTTCCGACCGTGCAGTGCAGTGGGCGAGCGTTTGTGTTGAGCCGTTCGAACTGTTGTCTATTGACCGGCACTAGGAATCAAGTGTATAGTGTGCTGTACTACCGCACGGGGTCGTGATTTTTATTCCTTTCTGCAAGCAAAAGCAATATTAAAACATCATCAAACGAAGCGACATGGCAAACAGTGAAGCAATTCTGGACACACAGACGGCCACCCAGACCCAGATGACGCAAGATACGGCGCTGGAAAGTCAACCGATCGAGCACCCTAGCTATGGCCAGCTGCTGGGCAAGCATGTGAAAATGAAAAGCCTCGACCTGCGCCACAGTGAGTTTAAGGTGGGACGAGAAGGCACATGCCATCTGATCTTGGATGAAGACAACCTTCCGCCCTCCAAGTTGTGCCGAATTTCGAAGCACCACTTCACGATCAAGAAGGATCTGAACGACACAACCAGCCCTACCTACATACATGACCATTCCCGAAACGGAACGTACGTAAACGGGCGACTGATTGGGCCGAACAAATGCATGATCCTGCAAGCACAACGATATCATCTCGATCGCGGGCGTCAGCATACGGGCCTTCGTGTACTACGATCTGCGGTACAGCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2199#0 ANCACCAGCAGATACCCGCTTTAGCACAGAAATTTTATCCCCAAAATAAC-TCTTCCGTA 59
consensus_2199#1 ----CCGCTGAATGCTGCGCACAGCA---AAATTTTATC--CAAAATAACCTCTTCCGAC 51
** ** * **** ********** ********* *******
consensus_2199#0 CGCGCA-TGCAGTGGACGAGCGTTTGTGTTGAGCCGTTCGAACTGTTGTCTATTGACCGG 118
consensus_2199#1 CGTGCAGTGCAGTGGGCGAGCGTTTGTGTTGAGCCGTTCGAACTGTTGTCTATTGACCGG 111
** *** ******** ********************************************
consensus_2199#0 GGACTAGAATCAAGTGTATTGTGTGCTGNACTAACGGACGGGGCCGTGATTTTTATTCCT 178
consensus_2199#1 CACTAGGAATCAAGTGTATAGTGTGCTGTACTACCGCACGGGGTCGTGATTTTTATTCCT 171
************* ******** **** ** ****** ****************
consensus_2199#0 TTCTTGGAAGCAAACGAAATATTAAAACATCATCCAACGGAAAGGACCATGGCGAAACAG 238
consensus_2199#1 TTCT-GCAAGCAAAAGCAATATTAAAACATCATCAAACGAAGCGA--CATGGC-AAACAG 227
**** * ******* * ***************** **** * * ****** ******
consensus_2199#0 TGAAGCCAATCTTGGACCACAACCAGGAACGGGGCAGNCAGGAACCCAGGATT--GTAAT 296
consensus_2199#1 TGAAGCAATTCTGGACACACAGACGGCCACCCAGACCCAGATGACGCAAGATACGGCGCT 287
****** * *** * **** * * ** * ** ** *** * *
consensus_2199#0 GCAAGGATTACCGGGCTGCTGGAAAAGGTTCAAACGGCATTCGGAGCCAGCCCCTAAGAC 356
consensus_2199#1 GGAAAGTCAACCGATCGAGCACCCTAGCTATGGCCAGC-TGCTGGGCAAGCATGTGAAAA 346
* ** * **** * ** * * ** * * * ** *** * * *
consensus_2199#0 TTAATNTGGTCCAGACTNTTGGGGNCACAAGCACTGTGTGCACACAATTGNANACAAAGG 416
consensus_2199#1 TGAAAA--GCCTCGACCT---GCGCCACAGTGAGTTTAAGGTGGGACGAGAAGGCACATG 401
* ** * * *** * * **** * * * * * * * ** * *
consensus_2199#0 CCCTCGGGTACTTCACAAAAATTNCCAACGTTCCTAACGTTANTCTNCGGTTGGTTCCCG 476
consensus_2199#1 CCATCTGATCTTGGATGAAGA----CAACCTTCCGCCCTCCAAGTTGTGCCGAATTTCGA 457
** ** * * * * ** * **** **** * * * * ** *
consensus_2199#0 GACTTAATATATTCTTAAGGGAACACCTTGGCNGGCCCACAAGGTGGAAGGTATCTTCAA 536
consensus_2199#1 AGCACCACTTCACGATCAAGAAGGATCTGAACGACACAACCAGCCCTACC-TACATACAT 516
* * * * * * * * ** * * ** ** * ** * **
consensus_2199#0 AGCGGATTGGGTGA--ACCNGCAACAAAANGGGCACACCATTGGCCCCATACCTGGCATT 594
consensus_2199#1 GACCATTCCCGAAACGGAACGTACGTAAACGGGCGACTGATTGGGCCGAACAAATGCATG 576
* * * * * * *** **** ***** ** * ****
consensus_2199#0 CCTCGGGGGNATTGACAAAGGACAAAACCTTTACCAGGCACCTTCCCAAAAGNATATGGT 654
consensus_2199#1 ATCCTGCAAGCACAAC----GATATCATCTCGATCGCGGGCGTCAGCATACGGGCCTTCG 632
* * ** ** * * ** * * * * * ** * * *
consensus_2199#0 AGGGCCGACANACTATCCGCAACAGGNACACTTCAANCATNTACAACCNGAATACACAAA 714
consensus_2199#1 TGTAC---TACGATCTGCGGTACAGCA--------------------------------- 656
* * * * * ** ****
consensus_2199#0 GAGAAAGCGGAATTACTTGAACACGGAAAGAAAGACCANGTGCCTNAAACATAACCAGTA 774
consensus_2199#1 ------------------------------------------------------------
consensus_2199#0 ANNATTGTNACCNTGATCCCCGTCACACAANAGCAANACACNGCAAACCCGCACAAAACA 834
consensus_2199#1 ------------------------------------------------------------
consensus_2199#0 NCCGCCAACCCGAGAATAGGGGGACNCCGCNCCACCAAACAAAGGCCCTNAAGAACCCCC 894
consensus_2199#1 ------------------------------------------------------------
consensus_2199#0 GNGAAACNCCANACAAAGACAGACNCACACCCACCNAAAACCACNCGCCAANGAACNNAA 954
consensus_2199#1 ------------------------------------------------------------
consensus_2199#0 CAACANGACATAAACGGGACCACACGNACGAGAAACCCAANAACACGACACTGNCCGGAA 1014
consensus_2199#1 ------------------------------------------------------------
consensus_2199#0 CCAACACCANCCGCACNACCCGGACCATAAAAACGCGCCCNACNCNAACCNCGACAGAGC 1074
consensus_2199#1 ------------------------------------------------------------
consensus_2199#0 AACGCACGNANCNCNACACACAGACACGACAAANNCGCGCANACCAGCCCA 1125
consensus_2199#1 ---------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||