These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2258#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 593 fasta sequence [GAGGCAGATCGCACGAGGTGAGCAGGTGCACGGTGTATCGCGACATCATCCTTCTTCGGCGTGCCTGGTTCTGCTTTTGTTTTCCATTTGCGCAATCTCTTCTCGCGTCTTTTGTTGTTGTGATCGATTCGTGCGTGTGTATGTATGTGTGCAGCTCGATCAAAAACCAGAAGAGGGAAAAGGCTAGTGGATGCAAGCCAATACACGAAGGAGGTGCATGCAAGAGGAATAAACACAAAACACGGAACAATAGCAGCAGCAGCAAAACAGTAGAAGAATATCAATATAAACCAAAAGTGTGCGTGCGTGCATGTGTGGTTGTGTGTGAAGTACAACACGTGAAAGACAAAAGCAGACGCACAGAGAGGAGCAAAGTGTGTCATATACAAAAGAGGAACGAGAAGAGAGACCCTTAGGAGCGAAACATGGCGAAGGACGTGATAGAATCAAGATTGGGGCAAACAGAGAACAGAAGCCGNAACGGAACAAAGGATTGTCCAATGTAAAGGATTCGCGCGCACACGACACACAACCTTAACCTACCGAACGACGAACGTCCAGCGTGTGTGTGTGTGTGTGTGTGTGACGGTTAT] [+] EMBL AL696811 [GAGGCAGATCGCACGAGGTGAGCAGGTGCACGGTGTATCGCGACATCATCCTTCTTCGGCGTGCCTGGTTCTGCTTTTGTTTTCCATTTGCGCAATCTCTTCTCGCGTCTTTTGTTGTTGTGATCGATTCGTGCGTGTGTATGTATGTGTGCAGCTCGATCAAAAACCAGAAGAGGGAAAAGGCTAGTGGATGCAAGCCAATACACGAAGGAGGTGCATGCAAGAGGAATAAACACAAAACACGGAACAATAGCAGCAGCAGCAAAACAGTAGAAGAATATCAATATAAACCAAAAGTGTGCGTGCGTGCATGTGTGGTTGTGTGTGAAGTACAACACGTGAAAGACAAAAGCAGACGCACAGAGAGGAGCAAAGTGTGTCATATACAAAAGAGGAACGAGAAGAGAGACCCTTAGGAGCGAAACATGGCGAAGGACGTGATAGAATCAAGATTGGGGCAAACAGAGAACAGAAGCCGNAACGGAACAAAGGATTGTCCAATGTAAAGGATTCGCGCGCACACGACACACAACCTTAACCTACCGAACGACGAACGTCCAGCGTGTGTGTGTGTGTGTGTGTGTGACGGTTAT] consensusID : consensus_2258#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 179 fasta sequence [TCCGCATTGTGTCCCTGCCGGAGAATAAGCGTACTCCACATGCTAGGCTGTCCCCGTGAAAAGGCTAGTGGATGCAAGCCAATACACGAAGGAGGTGCATGCAAGAGGAATAAACACAAAACACGGAACAATAGCAGCAGCAGCAGCAGCAGCAAAACAGTAGAAGAATATCAACGATA] [+] EMBL BM590272 [TCCGCATTGTGTCCCTGCCGGAGAATAAGCGTACTCCACATGCTAGGCTGTCCCCGTGAAAAGGCTAGTGGATGCAAGCCAATACACGAAGGAGGTGCATGCAAGAGGAATAAACACAAAACACGGAACAATAGCAGCAGCAGCAGCAGCAGCAAAACAGTAGAAGAATATCAACGATA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2258#0 GAGGCAGATCGCACGAGGTGAGCAGGTGCACGGTGTATCGCGACATCATCCTTCTTCGGC 60 consensus_2258#1 ------------------------------------------------------------ consensus_2258#0 GTGCCTGGTTCTGCTTTTGTTTTCCATTTGCGCAATCTCTTCTCGCGTCTTTTGTTGTTG 120 consensus_2258#1 --------------------------------------------------------TCCG 4 * consensus_2258#0 TGATCGATTCGTGCGTGTGTATGTATGTGTGCAGCTCGATCAAAAACCAGAAGAGGGAAA 180 consensus_2258#1 CATTGTGTCCCTGCCGGAGAATAAGCGTACTCCACATGCT---AGGCTGTCCCCGTGAAA 61 * * * *** * * ** ** * * * * * * * **** consensus_2258#0 AGGCTAGTGGATGCAAGCCAATACACGAAGGAGGTGCATGCAAGAGGAATAAACACAAAA 240 consensus_2258#1 AGGCTAGTGGATGCAAGCCAATACACGAAGGAGGTGCATGCAAGAGGAATAAACACAAAA 121 ************************************************************ consensus_2258#0 CACGGAACAATAGCAGCAGCAGCAAAACAGTAGAAGAATATCAATATAA-ACCAAAAGTG 299 consensus_2258#1 CACGGAACAATAGCAGCAGCAGCAG--CAGCAGCAAAACAGTAGAAGAATATCAACGATA 179 ************************ *** ** * ** * * * ** * *** * consensus_2258#0 TGCGTGCGTGCATGTGTGGTTGTGTGTGAAGTACAACACGTGAAAGACAAAAGCAGACGC 359 consensus_2258#1 ------------------------------------------------------------ consensus_2258#0 ACAGAGAGGAGCAAAGTGTGTCATATACAAAAGAGGAACGAGAAGAGAGACCCTTAGGAG 419 consensus_2258#1 ------------------------------------------------------------ consensus_2258#0 CGAAACATGGCGAAGGACGTGATAGAATCAAGATTGGGGCAAACAGAGAACAGAAGCCGN 479 consensus_2258#1 ------------------------------------------------------------ consensus_2258#0 AACGGAACAAAGGATTGTCCAATGTAAAGGATTCGCGCGCACACGACACACAACCTTAAC 539 consensus_2258#1 ------------------------------------------------------------ consensus_2258#0 CTACCGAACGACGAACGTCCAGCGTGTGTGTGTGTGTGTGTGTGTGACGGTTAT 593 consensus_2258#1 ------------------------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||