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These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 2291 cluster # 2291       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2291#0 length = 630 sequences # 1  
consensus_2291#1 length = 166 sequences # 1  

consensusID : consensus_2291#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 630
fasta sequence
                              [TGCGTGTCGAGCCCGCACTTTCAGGTGGCCGAGCGGGCCCTGTACTACTGGAACAATGACTACATCATGTCGCTGATATCGGAAAACTCGAAGGTGATCATGCCGATCATGTTCCCCGCCCTGTACAGCAACAGCAAGTCGCACTGGAACAAAACGATCCACGGGCTGATCTACAACGCGATCAAGCTGTTCATGGAGATGAACCAGCTGCTGTTCGACGAGTGCCACCGGAAGTACCAGGCGGAGCAGGAGACGGAGCAGGAGAAGCTGGCCCAGCGGGACGCCCTGTGGCAGCAGATGGAGGATCTGGCCGCGCGGAACAGTAAGTTGACGCTGAACGACGACGAGTCGCAGCAGTCGGGCAGTGGGCGACTTTCGAGCAGCTTTAGCCACCCCCAGCAGCAACAGCAGCAGCAGCACCGACAGATGAACGGAACGTCGGGAGGTGGTGGAGTGTACGATCGGCGATCGATACAGCACAGTAGCACCTAAACGGGGGAAGGAGCGTCTAAGTCACCAAGTGGCCCCGCTCTCACATAGACACACACACACACAAACAGATAGACGGTCGGACACTATTACACTAAACAGAGCATCCTAGACTTCCATTTCCTGCGCTTCTACACACAC]

[+] EMBL BX614905             [TGCGTGTCGAGCCCGCACTTTCAGGTGGCCGAGCGGGCCCTGTACTACTGGAACAATGACTACATCATGTCGCTGATATCGGAAAACTCGAAGGTGATCATGCCGATCATGTTCCCCGCCCTGTACAGCAACAGCAAGTCGCACTGGAACAAAACGATCCACGGGCTGATCTACAACGCGATCAAGCTGTTCATGGAGATGAACCAGCTGCTGTTCGACGAGTGCCACCGGAAGTACCAGGCGGAGCAGGAGACGGAGCAGGAGAAGCTGGCCCAGCGGGACGCCCTGTGGCAGCAGATGGAGGATCTGGCCGCGCGGAACAGTAAGTTGACGCTGAACGACGACGAGTCGCAGCAGTCGGGCAGTGGGCGACTTTCGAGCAGCTTTAGCCACCCCCAGCAGCAACAGCAGCAGCAGCACCGACAGATGAACGGAACGTCGGGAGGTGGTGGAGTGTACGATCGGCGATCGATACAGCACAGTAGCACCTAAACGGGGGAAGGAGCGTCTAAGTCACCAAGTGGCCCCGCTCTCACATAGACACACACACACACAAACAGATAGACGGTCGGACACTATTACACTAAACAGAGCATCCTAGACTTCCATTTCCTGCGCTTCTACACACAC]


>consensus_2291#0 TGCGTGTCGAGCCCGCACTTTCAGGTGGCCGAGCGGGCCCTGTACTACTGGAACAATGAC TACATCATGTCGCTGATATCGGAAAACTCGAAGGTGATCATGCCGATCATGTTCCCCGCC CTGTACAGCAACAGCAAGTCGCACTGGAACAAAACGATCCACGGGCTGATCTACAACGCG ATCAAGCTGTTCATGGAGATGAACCAGCTGCTGTTCGACGAGTGCCACCGGAAGTACCAG GCGGAGCAGGAGACGGAGCAGGAGAAGCTGGCCCAGCGGGACGCCCTGTGGCAGCAGATG GAGGATCTGGCCGCGCGGAACAGTAAGTTGACGCTGAACGACGACGAGTCGCAGCAGTCG GGCAGTGGGCGACTTTCGAGCAGCTTTAGCCACCCCCAGCAGCAACAGCAGCAGCAGCAC CGACAGATGAACGGAACGTCGGGAGGTGGTGGAGTGTACGATCGGCGATCGATACAGCAC AGTAGCACCTAAACGGGGGAAGGAGCGTCTAAGTCACCAAGTGGCCCCGCTCTCACATAG ACACACACACACACAAACAGATAGACGGTCGGACACTATTACACTAAACAGAGCATCCTA GACTTCCATTTCCTGCGCTTCTACACACAC



consensusID : consensus_2291#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 166
fasta sequence
                              [CCGCCCACGCGTCCGCAAGTGGCCCCGCTCTCACACAGACACACACACACACAAACAGATAGACGGTCGGACACTATTACACTAAACAGAGCATCCTTGACTTCCATTTCCTGCGCTTCTACACACACACACACACACACACACACACAAAACACAGGGTGATATG]

[+] EMBL BM652632             [CCGCCCACGCGTCCGCAAGTGGCCCCGCTCTCACACAGACACACACACACACAAACAGATAGACGGTCGGACACTATTACACTAAACAGAGCATCCTTGACTTCCATTTCCTGCGCTTCTACACACACACACACACACACACACACACAAAACACAGGGTGATATG]


>consensus_2291#1 CCGCCCACGCGTCCGCAAGTGGCCCCGCTCTCACACAGACACACACACACACAAACAGAT AGACGGTCGGACACTATTACACTAAACAGAGCATCCTTGACTTCCATTTCCTGCGCTTCT ACACACACACACACACACACACACACACAAAACACAGGGTGATATG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2291#0      TGCGTGTCGAGCCCGCACTTTCAGGTGGCCGAGCGGGCCCTGTACTACTGGAACAATGAC 60
consensus_2291#1      ------------------------------------------------------------
                                                                                  

consensus_2291#0      TACATCATGTCGCTGATATCGGAAAACTCGAAGGTGATCATGCCGATCATGTTCCCCGCC 120
consensus_2291#1      ------------------------------------------------------------
                                                                                  

consensus_2291#0      CTGTACAGCAACAGCAAGTCGCACTGGAACAAAACGATCCACGGGCTGATCTACAACGCG 180
consensus_2291#1      ------------------------------------------------------------
                                                                                  

consensus_2291#0      ATCAAGCTGTTCATGGAGATGAACCAGCTGCTGTTCGACGAGTGCCACCGGAAGTACCAG 240
consensus_2291#1      ------------------------------------------------------------
                                                                                  

consensus_2291#0      GCGGAGCAGGAGACGGAGCAGGAGAAGCTGGCCCAGCGGGACGCCCTGTGGCAGCAGATG 300
consensus_2291#1      ------------------------------------------------------------
                                                                                  

consensus_2291#0      GAGGATCTGGCCGCGCGGAACAGTAAGTTGACGCTGAACGACGACGAGTCGCAGCAGTCG 360
consensus_2291#1      ------------------------------------------------------------
                                                                                  

consensus_2291#0      GGCAGTGGGCGACTTTCGAGCAGCTTTAGCCACCCCCAGCAGCAACAGCAGCAGCAGCAC 420
consensus_2291#1      ------------------------------------------------------------
                                                                                  

consensus_2291#0      CGACAGATGAACGGAACGTCGGGAGGTGGTGGAGTGTACGATCGGCGATCGATACAGCAC 480
consensus_2291#1      ------------------------------------------------------------
                                                                                  

consensus_2291#0      AGTAGCACCTAAACGGGGGAAGGAGCGTCTAAGTCACCAAGTGGCCCCGCTCTCACATAG 540
consensus_2291#1      ----------------------CCGCCCACGCGTCCGCAAGTGGCCCCGCTCTCACACAG 38
                                              **      ***  ******************** **

consensus_2291#0      ACACACACACACACAAACAGATAGACGGTCGGACACTATTACACTAAACAGAGCATCCTA 600
consensus_2291#1      ACACACACACACACAAACAGATAGACGGTCGGACACTATTACACTAAACAGAGCATCCTT 98
                      *********************************************************** 

consensus_2291#0      GACTTCCATTTCCTGCGCTTCTACACACAC------------------------------ 630
consensus_2291#1      GACTTCCATTTCCTGCGCTTCTACACACACACACACACACACACACACACAAAACACAGG 158
                      ******************************                              

consensus_2291#0      --------
consensus_2291#1      GTGATATG 166
                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)