These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2291#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 630 fasta sequence [TGCGTGTCGAGCCCGCACTTTCAGGTGGCCGAGCGGGCCCTGTACTACTGGAACAATGACTACATCATGTCGCTGATATCGGAAAACTCGAAGGTGATCATGCCGATCATGTTCCCCGCCCTGTACAGCAACAGCAAGTCGCACTGGAACAAAACGATCCACGGGCTGATCTACAACGCGATCAAGCTGTTCATGGAGATGAACCAGCTGCTGTTCGACGAGTGCCACCGGAAGTACCAGGCGGAGCAGGAGACGGAGCAGGAGAAGCTGGCCCAGCGGGACGCCCTGTGGCAGCAGATGGAGGATCTGGCCGCGCGGAACAGTAAGTTGACGCTGAACGACGACGAGTCGCAGCAGTCGGGCAGTGGGCGACTTTCGAGCAGCTTTAGCCACCCCCAGCAGCAACAGCAGCAGCAGCACCGACAGATGAACGGAACGTCGGGAGGTGGTGGAGTGTACGATCGGCGATCGATACAGCACAGTAGCACCTAAACGGGGGAAGGAGCGTCTAAGTCACCAAGTGGCCCCGCTCTCACATAGACACACACACACACAAACAGATAGACGGTCGGACACTATTACACTAAACAGAGCATCCTAGACTTCCATTTCCTGCGCTTCTACACACAC] [+] EMBL BX614905 [TGCGTGTCGAGCCCGCACTTTCAGGTGGCCGAGCGGGCCCTGTACTACTGGAACAATGACTACATCATGTCGCTGATATCGGAAAACTCGAAGGTGATCATGCCGATCATGTTCCCCGCCCTGTACAGCAACAGCAAGTCGCACTGGAACAAAACGATCCACGGGCTGATCTACAACGCGATCAAGCTGTTCATGGAGATGAACCAGCTGCTGTTCGACGAGTGCCACCGGAAGTACCAGGCGGAGCAGGAGACGGAGCAGGAGAAGCTGGCCCAGCGGGACGCCCTGTGGCAGCAGATGGAGGATCTGGCCGCGCGGAACAGTAAGTTGACGCTGAACGACGACGAGTCGCAGCAGTCGGGCAGTGGGCGACTTTCGAGCAGCTTTAGCCACCCCCAGCAGCAACAGCAGCAGCAGCACCGACAGATGAACGGAACGTCGGGAGGTGGTGGAGTGTACGATCGGCGATCGATACAGCACAGTAGCACCTAAACGGGGGAAGGAGCGTCTAAGTCACCAAGTGGCCCCGCTCTCACATAGACACACACACACACAAACAGATAGACGGTCGGACACTATTACACTAAACAGAGCATCCTAGACTTCCATTTCCTGCGCTTCTACACACAC] consensusID : consensus_2291#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 166 fasta sequence [CCGCCCACGCGTCCGCAAGTGGCCCCGCTCTCACACAGACACACACACACACAAACAGATAGACGGTCGGACACTATTACACTAAACAGAGCATCCTTGACTTCCATTTCCTGCGCTTCTACACACACACACACACACACACACACACAAAACACAGGGTGATATG] [+] EMBL BM652632 [CCGCCCACGCGTCCGCAAGTGGCCCCGCTCTCACACAGACACACACACACACAAACAGATAGACGGTCGGACACTATTACACTAAACAGAGCATCCTTGACTTCCATTTCCTGCGCTTCTACACACACACACACACACACACACACACAAAACACAGGGTGATATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2291#0 TGCGTGTCGAGCCCGCACTTTCAGGTGGCCGAGCGGGCCCTGTACTACTGGAACAATGAC 60 consensus_2291#1 ------------------------------------------------------------ consensus_2291#0 TACATCATGTCGCTGATATCGGAAAACTCGAAGGTGATCATGCCGATCATGTTCCCCGCC 120 consensus_2291#1 ------------------------------------------------------------ consensus_2291#0 CTGTACAGCAACAGCAAGTCGCACTGGAACAAAACGATCCACGGGCTGATCTACAACGCG 180 consensus_2291#1 ------------------------------------------------------------ consensus_2291#0 ATCAAGCTGTTCATGGAGATGAACCAGCTGCTGTTCGACGAGTGCCACCGGAAGTACCAG 240 consensus_2291#1 ------------------------------------------------------------ consensus_2291#0 GCGGAGCAGGAGACGGAGCAGGAGAAGCTGGCCCAGCGGGACGCCCTGTGGCAGCAGATG 300 consensus_2291#1 ------------------------------------------------------------ consensus_2291#0 GAGGATCTGGCCGCGCGGAACAGTAAGTTGACGCTGAACGACGACGAGTCGCAGCAGTCG 360 consensus_2291#1 ------------------------------------------------------------ consensus_2291#0 GGCAGTGGGCGACTTTCGAGCAGCTTTAGCCACCCCCAGCAGCAACAGCAGCAGCAGCAC 420 consensus_2291#1 ------------------------------------------------------------ consensus_2291#0 CGACAGATGAACGGAACGTCGGGAGGTGGTGGAGTGTACGATCGGCGATCGATACAGCAC 480 consensus_2291#1 ------------------------------------------------------------ consensus_2291#0 AGTAGCACCTAAACGGGGGAAGGAGCGTCTAAGTCACCAAGTGGCCCCGCTCTCACATAG 540 consensus_2291#1 ----------------------CCGCCCACGCGTCCGCAAGTGGCCCCGCTCTCACACAG 38 ** *** ******************** ** consensus_2291#0 ACACACACACACACAAACAGATAGACGGTCGGACACTATTACACTAAACAGAGCATCCTA 600 consensus_2291#1 ACACACACACACACAAACAGATAGACGGTCGGACACTATTACACTAAACAGAGCATCCTT 98 *********************************************************** consensus_2291#0 GACTTCCATTTCCTGCGCTTCTACACACAC------------------------------ 630 consensus_2291#1 GACTTCCATTTCCTGCGCTTCTACACACACACACACACACACACACACACAAAACACAGG 158 ****************************** consensus_2291#0 -------- consensus_2291#1 GTGATATG 166 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||