These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2297#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 574 fasta sequence [CCGGATGATTGTTCATAGTTTATTGTTTGGAAGAACATATGTTCAACCAAACAGTAACAGAAACGCTAAACCAACGGTGATCGATAGAGTTTCCAACAGATGATGATTGTTCATAGTTTATTGTTTCCGTTCCATTTGTTCTGCTGTGACAAAATAGATCCCATTTTAAAATGCGTTCTATGTTGATTAAAGGAAAAACACACACACACATAAGCATACAGAAGAGCTTTTCCGCGCAGTTAGAAACTCCTTTAAATAGTAATAGAAAACAATATGCCACACACACAGAATAGACAGAACACACACACACACACGCAGCAGAAATAACACAAAACAACACAGCAGCTAACAACAGCGCAGTTCTTGTTGATAAAATCCTATGGCTCACAGAGCAACAAAACAGGCAAACATAAAAAAAAGGCTATCAAATTTACAGGAAATTGAAAAGGTACGAAATAAACGTTTCTCAAGCAGTTTTGCTAACCCATTGATGTAGACCTTTAAATGCAAACGCTCTTCTTTTGGTTTGTTCGTTACCCTAGGATGTGATGAATGGATGCAGTCGGGAGTTTTG] [+] EMBL BM598585 [CCGGATGATTGTTCATAGTTTATTGTTTGGAAGAACATATGTTCAACCAAACAGTAACAGAAACGCTAAACCAACGGTGATCGATAGAGTTTCCAACAGATGATGATTGTTCATAGTTTATTGTTTCCGTTCCATTTGTTCTGCTGTGACAAAATAGATCCCATTTTAAAATGCGTTCTATGTTGATTAAAGGAAAAACACACACACACATAAGCATACAGAAGAGCTTTTCCGCGCAGTTAGAAACTCCTTTAAATAGTAATAGAAAACAATATGCCACACACACAGAATAGACAGAACACACACACACACACGCAGCAGAAATAACACAAAACAACACAGCAGCTAACAACAGCGCAGTTCTTGTTGATAAAATCCTATGGCTCACAGAGCAACAAAACAGGCAAACATAAAAAAAAGGCTATCAAATTTACAGGAAATTGAAAAGGTACGAAATAAACGTTTCTCAAGCAGTTTTGCTAACCCATTGATGTAGACCTTTAAATGCAAACGCTCTTCTTTTGGTTTGTTCGTTACCCTAGGATGTGATGAATGGATGCAGTCGGGAGTTTTG] consensusID : consensus_2297#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 290 fasta sequence [TGCAGTGAATTGTCTCTTTAAAAGCGAACGAAATCTTAAAAGGAAGAACATATGTTCAACCAAACAGTAACAGAAACGCTAAACCAACGGTGATCGATAGAGTTTCCAACAGATGATGATTGTTCATAGTTTATTGTTTCCGTTCCATTTGTTCTGCTGTGACAAAATAGATCCCATTTTAAAATGCGTTCTATGTTGATTAAAGGAAAAACACACACACACATAAGCATACAGAAGAGCTTTTCCGCGCAGTTAGAAACTCCTTTAAATAGTAATAGAAAACAATATGC] [+] EMBL BX613890 [TGCAGTGAATTGTCTCTTTAAAAGCGAACGAAATCTTAAAAGGAAGAACATATGTTCAACCAAACAGTAACAGAAACGCTAAACCAACGGTGATCGATAGAGTTTCCAACAGATGATGATTGTTCATAGTTTATTGTTTCCGTTCCATTTGTTCTGCTGTGACAAAATAGATCCCATTTTAAAATGCGTTCTATGTTGATTAAAGGAAAAACACACACACACATAAGCATACAGAAGAGCTTTTCCGCGCAGTTAGAAACTCCTTTAAATAGTAATAGAAAACAATATGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2297#0 -------------CCGGATGATTGTTCATAGTTTATTGTTTGGAAGAACATATGTTCAAC 47 consensus_2297#1 TGCAGTGAATTGTCTCTTTAAAAGCGAACGAAATCTTAAAAGGAAGAACATATGTTCAAC 60 * * * * * * ** ******************* consensus_2297#0 CAAACAGTAACAGAAACGCTAAACCAACGGTGATCGATAGAGTTTCCAACAGATGATGAT 107 consensus_2297#1 CAAACAGTAACAGAAACGCTAAACCAACGGTGATCGATAGAGTTTCCAACAGATGATGAT 120 ************************************************************ consensus_2297#0 TGTTCATAGTTTATTGTTTCCGTTCCATTTGTTCTGCTGTGACAAAATAGATCCCATTTT 167 consensus_2297#1 TGTTCATAGTTTATTGTTTCCGTTCCATTTGTTCTGCTGTGACAAAATAGATCCCATTTT 180 ************************************************************ consensus_2297#0 AAAATGCGTTCTATGTTGATTAAAGGAAAAACACACACACACATAAGCATACAGAAGAGC 227 consensus_2297#1 AAAATGCGTTCTATGTTGATTAAAGGAAAAACACACACACACATAAGCATACAGAAGAGC 240 ************************************************************ consensus_2297#0 TTTTCCGCGCAGTTAGAAACTCCTTTAAATAGTAATAGAAAACAATATGCCACACACACA 287 consensus_2297#1 TTTTCCGCGCAGTTAGAAACTCCTTTAAATAGTAATAGAAAACAATATGC---------- 290 ************************************************** consensus_2297#0 GAATAGACAGAACACACACACACACACGCAGCAGAAATAACACAAAACAACACAGCAGCT 347 consensus_2297#1 ------------------------------------------------------------ consensus_2297#0 AACAACAGCGCAGTTCTTGTTGATAAAATCCTATGGCTCACAGAGCAACAAAACAGGCAA 407 consensus_2297#1 ------------------------------------------------------------ consensus_2297#0 ACATAAAAAAAAGGCTATCAAATTTACAGGAAATTGAAAAGGTACGAAATAAACGTTTCT 467 consensus_2297#1 ------------------------------------------------------------ consensus_2297#0 CAAGCAGTTTTGCTAACCCATTGATGTAGACCTTTAAATGCAAACGCTCTTCTTTTGGTT 527 consensus_2297#1 ------------------------------------------------------------ consensus_2297#0 TGTTCGTTACCCTAGGATGTGATGAATGGATGCAGTCGGGAGTTTTG 574 consensus_2297#1 ----------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||