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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2322#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1482 fasta sequence
[GCCACCACCGCGGCTAGCTCAGGCAGAATTGCCCCCAGGTTTTATCAGAGAACAGAGAAGTGTTTGAATTTCCCGAATCTGAGCCCGTTCTTCCCAAAATTCCACACCGGACACAGGTTTCGGTAAGACATAACCTGCTGTCTGTATGCACAACAACCAACCTCTCTGTTCTGTGCAAGCCTAGTGTGACGATTATTTACGCTGTGTGCTATATGGCTGTGGCATNACCAGCATTGGGACCGCCAGTGTAAGGCTGTAGCAGCCACAGGGAAGCACAGTGGGAAGCCAGTCAGGCAGGTGCCAAAAAACANAGGGGTACCANTTATTTCTCCTTACCAAGCTATACCCTGCGGTTNATCGCGGTTGGTTTCAGGTTAACCTGTGGTATTCCGAATGGAACGCGGAAGCCAACAGTGGCATTGGCACATTTTGCCTGGGCCCCAAGGCGAATTAAGTTTTAGGCCCCTTGGTCGCCTNGGCTTACCGGTACCCTTGTATCCNGGGTTTGGTTGCCGGGTCCTNAAAGTTAGTTAGTATGCCAAGGNTCATAGCGCCCCCGGTTGGCCGCAGCAATTATATCCAATCAGGAATTTTCCCTGGCGTNTCCCAAACCCATTNTTGAACCCTGGAATTGGTGCCNGGCCACAACCTGGGGTATTAGGCCCTGGTATCATTATGGCATTCGCAAGGGCAATTACCCTGGGGCCCAACCAAACCCAGGCGGTTTGGTAGGCATTCCCTGTTAACTGTAATAAGCCGAATAATGGCAACCAGGTTTNAACGTTTAAACCCCTACGGGNGCGGTTTCGGCAATTACCCGGGCAATCTGCCAACCCTGAGGAAGTATTAAAANCCCTCAAGGTGAGGCAACCTTCTTTCTATGGGCGTTTCAACCTGCTAACACGCACAAGGGGGGTATAACACTGAGTTTAGGCGCCCNGGGGAATAAGCNCTTTCAAATTAGGTTTATGCCTCGGCCCATGGTGNCAACTATTGGCGCCNTTAGGTATAGGCGCAGACGTCCGNGTGTGTTANGCCCAGGAGGGACATNATCCCTTTCAGGGCATTAGGTTTACGCCCCGCGGCCTCTATGGGTATTGCCACTCTGACCCAGATGCACTGACAAAANGCACAACACCGTGCAATGGTAACTTNCNTTTATTGGGCAGCACAAACAACGGACCCTGGTNGACTANGGGACCNANACGTGGNCCCACACNAACCCTGCGTGGTCACACCCGGCGAACACCTNACACTTCTCTTTGGCCCCCTGAGGAACGTTACCCCCCCANTTGGAAGGAATTGTGAANAAAACCCCGGGTTTTCGCAACAGTGCCGGGACCAGNAAAACGACGGCAGNAAACTAAAAGCGACCCANGAGGGNTANCCCAGGACACGTTCCCCATTTTGGTGCAGNNGTGGGCAAAAAAACACGCCCAAAGATATTTACACTANAAACCATATGNNGTNACACACACGGGN]
[+] EMBL AL697300 [GCCACCACCGCGGCTAGCTCAGGCAGAATTGCCCCCAGGTTTTATCAGAGAACAGAGAAGTGTTTGAATTTCCCGAATCTGAGCCCGTTCTTCCCAAAATTCCACACCGGACACAGGTTTCGGTAAGACATAACCTGCTGTCTGTATGCACAACAACCAACCTCTCTGTTCTGTGCAAGCCTAGTGTGACGATTATTTACGCTGTGTGCTATATGGCTGTGGCATNACCAGCATTGGGACCGCCAGTGTAAGGCTGTAGCAGCCACAGGGAAGCACAGTGGGAAGCCAGTCAGGCAGGTGCCAAAAAACANAGGGGTACCANTTATTTCTCCTTACCAAGCTATACCCTGCGGTTNATCGCGGTTGGTTTCAGGTTAACCTGTGGTATTCCGAATGGAACGCGGAAGCCAACAGTGGCATTGGCACATTTTGCCTGGGCCCCAAGGCGAATTAAGTTTTAGGCCCCTTGGTCGCCTNGGCTTACCGGTACCCTTGTATCCNGGGTTTGGTTGCCGGGTCCTNAAAGTTAGTTAGTATGCCAAGGNTCATAGCGCCCCCGGTTGGCCGCAGCAATTATATCCAATCAGGAATTTTCCCTGGCGTNTCCCAAACCCATTNTTGAACCCTGGAATTGGTGCCNGGCCACAACCTGGGGTATTAGGCCCTGGTATCATTATGGCATTCGCAAGGGCAATTACCCTGGGGCCCAACCAAACCCAGGCGGTTTGGTAGGCATTCCCTGTTAACTGTAATAAGCCGAATAATGGCAACCAGGTTTNAACGTTTAAACCCCTACGGGNGCGGTTTCGGCAATTACCCGGGCAATCTGCCAACCCTGAGGAAGTATTAAAANCCCTCAAGGTGAGGCAACCTTCTTTCTATGGGCGTTTCAACCTGCTAACACGCACAAGGGGGGTATAACACTGAGTTTAGGCGCCCNGGGGAATAAGCNCTTTCAAATTAGGTTTATGCCTCGGCCCATGGTGNCAACTATTGGCGCCNTTAGGTATAGGCGCAGACGTCCGNGTGTGTTANGCCCAGGAGGGACATNATCCCTTTCAGGGCATTAGGTTTACGCCCCGCGGCCTCTATGGGTATTGCCACTCTGACCCAGATGCACTGACAAAANGCACAACACCGTGCAATGGTAACTTNCNTTTATTGGGCAGCACAAACAACGGACCCTGGTNGACTANGGGACCNANACGTGGNCCCACACNAACCCTGCGTGGTCACACCCGGCGAACACCTNACACTTCTCTTTGGCCCCCTGAGGAACGTTACCCCCCCANTTGGAAGGAATTGTGAANAAAACCCCGGGTTTTCGCAACAGTGCCGGGACCAGNAAAACGACGGCAGNAAACTAAAAGCGACCCANGAGGGNTANCCCAGGACACGTTCCCCATTTTGGTGCAGNNGTGGGCAAAAAAACACGCCCAAAGATATTTACACTANAAACCATATGNNGTNACACACACGGGN]
consensusID : consensus_2322#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 645 fasta sequence
[CCGGCCAGCGAAGGCGAACGTGCGGCTAGCGAACTCGCGCGTCCGAGCAAGCGTGGTGTTTGGACAGAGTTTTCGAAGTGTGTGATACGTGCGTGGTTTCATCGTGCTGAAGAAATACTCGAAACTATCCCAATTCCGTTTGAACAATTCAAACACTTTGTCGCGTGAGCCAGCCAAGAAACCCGAACGTGAAGAGTTTTCGGGGGCTCCTAATCTAAACCTGTTTGCTGGTGTTGTTTGTGTGGATCGAAATTGTGTGATCTTCCCCATTCGATATTGAGTTTTAGAGGTGGATTTGTGGTGAAACAAGTTATTGGCCGGTACGGGCTCAGAAGTTGTGTGCCAGTTTCGGGAGTTTCGGGATTTTCGACCGGTCGGAAGTTCCTGGTTCTCCAGTGCGAAACGGGAGTGAGAGTGAGTCGGCGAGTCGTTTCCGCGTGTGGGTGATTGTGTAGAAACCGGACTCGCTCGCTGACCTGCGATAGAAAGGCTGTGGTGTGCCTATCGAGAACAGAGAAGTGTTTGAATTTCCCGAATCGAGCCCGTTCTTCCCAAAATTCCACACCGGAACAGGTTTCGGTAGACATAACCGCTGTCTGTATGCAAAAACAACCTCTCTGTTCGGAAGCTGTGGACGATTTTTAG]
[+] EMBL BM626621 [CCGGCCAGCGAAGGCGAACGTGCGGCTAGCGAACTCGCGCGTCCGAGCAAGCGTGGTGTTTGGACAGAGTTTTCGAAGTGTGTGATACGTGCGTGGTTTCATCGTGCTGAAGAAATACTCGAAACTATCCCAATTCCGTTTGAACAATTCAAACACTTTGTCGCGTGAGCCAGCCAAGAAACCCGAACGTGAAGAGTTTTCGGGGGCTCCTAATCTAAACCTGTTTGCTGGTGTTGTTTGTGTGGATCGAAATTGTGTGATCTTCCCCATTCGATATTGAGTTTTAGAGGTGGATTTGTGGTGAAACAAGTTATTGGCCGGTACGGGCTCAGAAGTTGTGTGCCAGTTTCGGGAGTTTCGGGATTTTCGACCGGTCGGAAGTTCCTGGTTCTCCAGTGCGAAACGGGAGTGAGAGTGAGTCGGCGAGTCGTTTCCGCGTGTGGGTGATTGTGTAGAAACCGGACTCGCTCGCTGACCTGCGATAGAAAGGCTGTGGTGTGCCTATCGAGAACAGAGAAGTGTTTGAATTTCCCGAATCGAGCCCGTTCTTCCCAAAATTCCACACCGGAACAGGTTTCGGTAGACATAACCGCTGTCTGTATGCAAAAACAACCTCTCTGTTCGGAAGCTGTGGACGATTTTTAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2322#0 GCCACCACCGCGGCTAGCTCAGGCAGAATTGCCCCCAGGTTTTATCAGAGAACAGAGAAG 60
consensus_2322#1 ------------------------------------------------------------
consensus_2322#0 TGTTTGAATTTCCCGAATCTGAGCCCGTTCTTCCCAAAATTCCACACCGGACACAGGTTT 120
consensus_2322#1 ------------------------------------------------------------
consensus_2322#0 CGGTAAGACATAACCTGCTGTCTGTATGCACAACAACCAACCTCTCTGTTCTGTGCAAGC 180
consensus_2322#1 ------------------------------------------------------------
consensus_2322#0 CTAGTGTGACGATTATTTACGCTGTGTGCTATATGGCTGTGGCATNACCAGCATTGGGAC 240
consensus_2322#1 ------------------------------------------------------------
consensus_2322#0 CGCCAGTGTAAGGCTGTAGCAGCCACAGGGAAGCACAGTGGGAAGCCAGTCAGGCAGGTG 300
consensus_2322#1 ------------------------------------------------------------
consensus_2322#0 CCAAAAAACANAGGGGTACCANTTATTTCTCCTTACCAAGCTATACCCTGCGGTTNATCG 360
consensus_2322#1 ------------------------------------------------------------
consensus_2322#0 CGGTTGGTTTCAGGTTAACCTGTGGTATTCCGAATGGAACGCGGAAGCCAACAGTGGCAT 420
consensus_2322#1 ------------------------------------------------------------
consensus_2322#0 TGGCACATTTTGCCTGGGCCCCAAGGCGAATTAAGTTTTAGGCCCCTTGGTCGCCTNGGC 480
consensus_2322#1 ------------------------------------------------------------
consensus_2322#0 TTACCGGTACCCTTGTATCCNGGGTTTGGTTGCCGGGTCCTNAAAGTTAGTTAGTATGCC 540
consensus_2322#1 ------------------------------------------------------------
consensus_2322#0 AAGGNTCATAGCGCCCCCGGTTGGCCGCAGCAATTATATCCAATCAGGAATTTTCCCTGG 600
consensus_2322#1 ------------------------------------------------------------
consensus_2322#0 CGTNTCCCAAACCCATTNTTGAACCCTGGAATTGGTGCCNGGCCACAACCTGGGGTATTA 660
consensus_2322#1 ------------------------------------------------------------
consensus_2322#0 GGCCCTGGTATCATTATGGCATTCGCAAGGGCAATTACCCTGGG-GCCCAACCAAACCCA 719
consensus_2322#1 ---CCGGCCAGCG--AAGGCGAACGTGCGGCTAGCGAACTCGCGCGTCCGAGCAAGCGT- 54
** * * * * *** ** ** * * * * * * ** * *** *
consensus_2322#0 GGCGGTTTGGTAGGCATTCCCTGTTAACTGTAATAAGCCGAATAATGGCAACCAGGTTTN 779
consensus_2322#1 GGTGTTTGGACAGAGTTTTCGAAGTGTGTGATACGTGCGTGGTTTCATCGTGCTGAAG-A 113
** * ** * ** ** * * ** * ** * * * *
consensus_2322#0 AACGTTTAAACCCCTACGGGNGCGGTTTCGGCAATTACCCGGGCAATCTGCCAACCCTGA 839
consensus_2322#1 AATACTCGAAACTATCCCAATTCCGTTTGAACAATT---CAAACACTTTGTCG--CGTGA 168
** * ** * * * * **** ***** * ** * ** * * ***
consensus_2322#0 GGAAGTATTAAAANCCCTCAAGGTGAGGCAACCTTCTTTCTATGGGCGTTTCAACCTGCT 899
consensus_2322#1 GCCAGC--CAAGAAACCCGAACGTGAAGAG------TTTTCGGGGGC-TCCTAATCTA-- 217
* ** ** * ** ** **** * *** **** * ** **
consensus_2322#0 AACACGCACAAGGGGGGTATAACACTGAGTTTAGGCGCCCNGGGGAATAAGCNCTTTCAA 959
consensus_2322#1 AACCTGTTTGCTGGTGTTGT--TTGTGTGGATCGAAATTGTGTGATCTTCCCCATTCGAT 275
*** * ** * * * ** * * * * * * * ** *
consensus_2322#0 ATTAGGTTT-ATGCCTCGGCCCATGGTGNCAACTATTGGCGCCNTTAGGTATAGGCGCAG 1018
consensus_2322#1 ATTGAGTTTTAGAGGTGGATTTGTGGTGAAACAAGTTATTGGCC---GGTACGGGCTCAG 332
*** **** * * * ***** * ** * * **** *** ***
consensus_2322#0 ACGTCCGNGTGTGTTANGCCCAGGAGGGACATNATCCCTTTCAGGGCATTAGGTTTACGC 1078
consensus_2322#1 AAGT---TGTGTGCCAGTTTCGGGAGTTTCGGGATTTTCGACCGGTCGGAAGTTCCTGGT 389
* ** ***** * * **** * ** * ** * ** * *
consensus_2322#0 CCCGCGGCCTCTATGGGTATTGCCACTCTGACCCAGATGCACTGACAAAANGCACAACAC 1138
consensus_2322#1 TCTCCAGTGCGAAACGGGAGTGAGAGTGAGTCGGCGAGTCGTTTCCGCG-TGTGGGTGAT 448
* * * * ** * ** * * * * ** * * * * *
consensus_2322#0 CGTGCAATGGTAACTTNCNTTTATTGGGCAGCACAAACAACGGACCCTGGTN-GACTANG 1197
consensus_2322#1 TGTGTAGAAACCGGACTCGCTCGCTGACCTGCGATAGAAA--GGCTGTGGTGTGCCTATC 506
*** * * * ** * ** * ** * * **** * ***
consensus_2322#0 GGACCNANACGTGGNCCCACACNAACCCTGCGTGGTCACACCCGGCGAACACCTNACACT 1257
consensus_2322#1 GAGAACAGAGAAGTGTTTGAATTTCCCGAATCGAGCCCGTTCTTCCCAAAATTCCACACC 566
* * * * * ** * * * * ** * ****
consensus_2322#0 TCTCTTTGGCCCCCTGAGGAACGTTACCCCCCCANTTGGAAGGAATTGTGAANAAAACCC 1317
consensus_2322#1 GGAACAGGTTTC---GGTAGACATAACCGCT--GTCTGTA------TGCAAAAACAACCT 615
* * * ** * *** * ** * ** ** * ****
consensus_2322#0 CGGGTTTTCGCAACAGTGCCGGGACCAGNAAAACGACGGCAGNAAACTAAAAGCGACCCA 1377
consensus_2322#1 CTCTGTTCGGAAGCTGTGG-ACGATTTTTAG----------------------------- 645
* ** * * * *** ** *
consensus_2322#0 NGAGGGNTANCCCAGGACACGTTCCCCATTTTGGTGCAGNNGTGGGCAAAAAAACACGCC 1437
consensus_2322#1 ------------------------------------------------------------
consensus_2322#0 CAAAGATATTTACACTANAAACCATATGNNGTNACACACACGGGN 1482
consensus_2322#1 ---------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||