cluster # 241

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 241 cluster # 241 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_241#0 length = 685 sequences # 1

consensus_241#1 length = 636 sequences # 1

consensusID : consensus_241#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 685
fasta sequence

                              [CCGCAGGTGCCAAAGGTGAAAGGGGTCATCAAGGGGCGCACGGACAAACGGGACCGAAAGGACCGCCCGGCATACCGGGCATACCGGGACTCCCCGGCCAGACGGGCGCCTCCGGACCGAAGGGTGAGAAGGGTAACACGGGCGAATCGGGCCCACCCGGTCCACCGGGACCGCCCGGCATGGTCATGCACACCGAGGGTGGCCGAAACGGAACGACCGATCAGTGTCAGTGTCAGCCGGGGCCACCCGGGCCACCGGGCGCACGCGGTCCATCCGGATACGATGGTGCGCCCGGACTTCCGGGCGAAACCGGACTTCCGGGCCATCCGGGTCTGCCGGGCGACAAGGGCGAACGGGGACTGCCCGGGCCGAAGGGCGAGAAGGGGCCGGAGTTTATCATCAACGAGAACGCAGCATTCAACTCGTCGCGGGCTAACAAAGGAGAGAAAGGCGAGCGTGGACAGCGTGGACGCCGGGGGAAGACGGGCCCACCGGGACCGATTGGGCCACCCGGCAAGCCTGGCGGTATGGGTGAAACGTGGCCGGGACGACCGGGACCAAAGGGAGACCAGGGGACCGAAAGGTGAAAAAGGCGACAGTATGGCGATGCGGGGCCTCAAAGGCGATAAAGGCGAACGTTGGCATGAATGGACGCGATGGACTGCCGGGCCCACCGGGTCTGCCC]

[+] EMBL BM627056             [CCGCAGGTGCCAAAGGTGAAAGGGGTCATCAAGGGGCGCACGGACAAACGGGACCGAAAGGACCGCCCGGCATACCGGGCATACCGGGACTCCCCGGCCAGACGGGCGCCTCCGGACCGAAGGGTGAGAAGGGTAACACGGGCGAATCGGGCCCACCCGGTCCACCGGGACCGCCCGGCATGGTCATGCACACCGAGGGTGGCCGAAACGGAACGACCGATCAGTGTCAGTGTCAGCCGGGGCCACCCGGGCCACCGGGCGCACGCGGTCCATCCGGATACGATGGTGCGCCCGGACTTCCGGGCGAAACCGGACTTCCGGGCCATCCGGGTCTGCCGGGCGACAAGGGCGAACGGGGACTGCCCGGGCCGAAGGGCGAGAAGGGGCCGGAGTTTATCATCAACGAGAACGCAGCATTCAACTCGTCGCGGGCTAACAAAGGAGAGAAAGGCGAGCGTGGACAGCGTGGACGCCGGGGGAAGACGGGCCCACCGGGACCGATTGGGCCACCCGGCAAGCCTGGCGGTATGGGTGAAACGTGGCCGGGACGACCGGGACCAAAGGGAGACCAGGGGACCGAAAGGTGAAAAAGGCGACAGTATGGCGATGCGGGGCCTCAAAGGCGATAAAGGCGAACGTTGGCATGAATGGACGCGATGGACTGCCGGGCCCACCGGGTCTGCCC]




>consensus_241#0
CCGCAGGTGCCAAAGGTGAAAGGGGTCATCAAGGGGCGCACGGACAAACGGGACCGAAAG
GACCGCCCGGCATACCGGGCATACCGGGACTCCCCGGCCAGACGGGCGCCTCCGGACCGA
AGGGTGAGAAGGGTAACACGGGCGAATCGGGCCCACCCGGTCCACCGGGACCGCCCGGCA
TGGTCATGCACACCGAGGGTGGCCGAAACGGAACGACCGATCAGTGTCAGTGTCAGCCGG
GGCCACCCGGGCCACCGGGCGCACGCGGTCCATCCGGATACGATGGTGCGCCCGGACTTC
CGGGCGAAACCGGACTTCCGGGCCATCCGGGTCTGCCGGGCGACAAGGGCGAACGGGGAC
TGCCCGGGCCGAAGGGCGAGAAGGGGCCGGAGTTTATCATCAACGAGAACGCAGCATTCA
ACTCGTCGCGGGCTAACAAAGGAGAGAAAGGCGAGCGTGGACAGCGTGGACGCCGGGGGA
AGACGGGCCCACCGGGACCGATTGGGCCACCCGGCAAGCCTGGCGGTATGGGTGAAACGT
GGCCGGGACGACCGGGACCAAAGGGAGACCAGGGGACCGAAAGGTGAAAAAGGCGACAGT
ATGGCGATGCGGGGCCTCAAAGGCGATAAAGGCGAACGTTGGCATGAATGGACGCGATGG
ACTGCCGGGCCCACCGGGTCTGCCC

consensusID : consensus_241#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 636
fasta sequence

                              [CCGCCCACGCGTCCGGGCGACAGTATGGCGATGCGGGGCCTCAAAGGCGATAAAGGCGAACGTGGCATGAATGGACGCGATGGACTGCCGGGCCCACCGGGTCTGCCCGCTGCCTCCGGTGACGGTGGCGTACAGTACATCCCCATGCCCGGCCCGCCGGGACCACCGGGACCTCCCGGACAGCCCGGCCCGCCCGGGCTGTCCATCGTCGGCGAGAAGGGTGAGCCCGGGATGGATTCGCGCAGTCCCTTCTACAGTGATTCGCAGCATGGATTTTACGGTCGTCCGGGAGGTCGGTCCAGTTTGGACGAGCTGAAGGCACTGCGAGAGCTCAAACACCACAAGGACTACGAAGACAGCACGCTCGGACCGCCGGGACCGCCGGGACCGCCAGGACCGCCGGGACCGGCCGGACGACCGCTGCACGACAGTGACGAGATACCGAACAGCTACGGGGCCAACGTACGCATCGTGCCCGGCGCAGTTACTTTCCAGAATGCAGAAACGATGTCAAAGATGTCTTCCACGACTCCCGTCGGTACGCTCGCTTACATAATTGACGAGGAAGCACTTCTGGTACGAGTGAACAAGGGCTGGCAGTACATTGCACTTGGAACGCTCGTGCCGATTGCAACG]

[+] EMBL BM634691             [CCGCCCACGCGTCCGGGCGACAGTATGGCGATGCGGGGCCTCAAAGGCGATAAAGGCGAACGTGGCATGAATGGACGCGATGGACTGCCGGGCCCACCGGGTCTGCCCGCTGCCTCCGGTGACGGTGGCGTACAGTACATCCCCATGCCCGGCCCGCCGGGACCACCGGGACCTCCCGGACAGCCCGGCCCGCCCGGGCTGTCCATCGTCGGCGAGAAGGGTGAGCCCGGGATGGATTCGCGCAGTCCCTTCTACAGTGATTCGCAGCATGGATTTTACGGTCGTCCGGGAGGTCGGTCCAGTTTGGACGAGCTGAAGGCACTGCGAGAGCTCAAACACCACAAGGACTACGAAGACAGCACGCTCGGACCGCCGGGACCGCCGGGACCGCCAGGACCGCCGGGACCGGCCGGACGACCGCTGCACGACAGTGACGAGATACCGAACAGCTACGGGGCCAACGTACGCATCGTGCCCGGCGCAGTTACTTTCCAGAATGCAGAAACGATGTCAAAGATGTCTTCCACGACTCCCGTCGGTACGCTCGCTTACATAATTGACGAGGAAGCACTTCTGGTACGAGTGAACAAGGGCTGGCAGTACATTGCACTTGGAACGCTCGTGCCGATTGCAACG]




>consensus_241#1
CCGCCCACGCGTCCGGGCGACAGTATGGCGATGCGGGGCCTCAAAGGCGATAAAGGCGAA
CGTGGCATGAATGGACGCGATGGACTGCCGGGCCCACCGGGTCTGCCCGCTGCCTCCGGT
GACGGTGGCGTACAGTACATCCCCATGCCCGGCCCGCCGGGACCACCGGGACCTCCCGGA
CAGCCCGGCCCGCCCGGGCTGTCCATCGTCGGCGAGAAGGGTGAGCCCGGGATGGATTCG
CGCAGTCCCTTCTACAGTGATTCGCAGCATGGATTTTACGGTCGTCCGGGAGGTCGGTCC
AGTTTGGACGAGCTGAAGGCACTGCGAGAGCTCAAACACCACAAGGACTACGAAGACAGC
ACGCTCGGACCGCCGGGACCGCCGGGACCGCCAGGACCGCCGGGACCGGCCGGACGACCG
CTGCACGACAGTGACGAGATACCGAACAGCTACGGGGCCAACGTACGCATCGTGCCCGGC
GCAGTTACTTTCCAGAATGCAGAAACGATGTCAAAGATGTCTTCCACGACTCCCGTCGGT
ACGCTCGCTTACATAATTGACGAGGAAGCACTTCTGGTACGAGTGAACAAGGGCTGGCAG
TACATTGCACTTGGAACGCTCGTGCCGATTGCAACG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_241#0      ----------CCGCAGGTGCCA--AAGGTGAAAGGGGTCATCAAGGGGCGCACGGACAAA 48
consensus_241#1      CCGCCCACGCGTCCGGGCGACAGTATGGCGATGCGGGGCCTCAAAGGCGATAAAGGCGAA 60
                                  * ** * **  * ** **   *** * **** **    *  * * **

consensus_241#0      CGGGAC-CGAAAGGACCGCCCGGCATACCGGGCATACCGGGACTCCCCGGCCAGACGGGC 107
consensus_241#1      CGTGGCATGAATGGACGCGATGGACTGCCGGGCCCACCGGGTCTGCCCGC---------T 111
                     ** * *  *** ****     **  * ******  ****** ** ****           

consensus_241#0      GCCTCCGGACCGAAGGGTGAGAAGGGTAACACGGGCGAATCGGGCCCACCCGGTCCACCG 167
consensus_241#1      GCCTCCGG--TGACGGTGGCGTACAGTA-CATCCCCATGCCCGGCCCGCCGGGACCACCG 168
                     ********   ** **  * * *  *** **    *    * ***** ** ** ******

consensus_241#0      GGACCGCCCGGCATGGTCATGCACACCGAGGGTGGCCGAAACGGAACGACCGATCAGTGT 227
consensus_241#1      GGACCTCCCGG-ACAGCCCGGCCCGCCCGGGCTGTCCATCGTCGG-----CGAGAAGGGT 222
                     ***** ***** *  * *  ** * **  ** ** **      *      ***  ** **

consensus_241#0      CAGTGTCAGCCGGGGCCACCCGGGCCACCGGGCGCACGCGGTCCATCCGGATACGATGGT 287
consensus_241#1      GAGCCCGGGATGGATTCGCGCAGTCCCTTCTACAGTGATTCGCAGCATGGATTTTACGGT 282
                      **     *  **   * * * * **      *         *     ****   * ***

consensus_241#0      GCGCCCGGACTTCCGGGCGAAACCGGAC---TTCCGGGCCATCCGGGTCTGCCGG-GCGA 343
consensus_241#1      -CGTCCGGGAGGTCGGTCCAGTTTGGACGAGCTGAAGGCACTGCGAGAGCTCAAACACCA 341
                      ** ****     *** * *    ****    *   ***  * ** *    *     * *

consensus_241#0      CAAGGGCGAACGGGGACTGCCCGGGCCGAAGGGCGAGAAGGGGCCGGAGTTTATCATCAA 403
consensus_241#1      CAAGGACTA-CGAAGACAGCACGCTCGGACCGCCGGGACCG--CCGGG-------ACCGC 391
                     ***** * * **  *** ** **  * **  * ** **  *  ****        * *  

consensus_241#0      CGAGAACGCAGCATTCAACTCGTCGCGGGCTAACAAAGGAGAGAAAGGCGAGCGTGGACA 463
consensus_241#1      CAGGACCGCCGGGACCGGCCGGACG---ACCGCTGCACGACAGTGACGAGATACCGAACA 448
                     *  ** *** *    *  *  * **    *      * ** **  * * **    * ***

consensus_241#0      GCGTGGACGCCGGGGGAAGACGGGCCCACCGGGACCGATTGGGCCACCCGGCAAGCCTGG 523
consensus_241#1      GCTACGGGGCCA-------ACGTACGCATCGTGCCCGGCGCAGTTACTTTCCAGAA-TGC 500
                     **   *  ***        ***  * ** ** * ***     *  **    **    ** 

consensus_241#0      CGGTATGG-GTGAAACGTGGCCGGGACGACCGGGACCAAAGGGAGACCAGGGGACCGAAA 582
consensus_241#1      AGAAACGATGTCAAAGATGTCTTCCACGACT---CCCGTCGGTACGCTCGCTTAC---AT 554
                      *  * *  ** ***  ** *    *****     **   ** *  *  *   **   * 

consensus_241#0      GGTGAAAAAGGCGACAGTATGGCGATGCGGGGCCTCAAAGGCGATAAAGGCGAACGTTGG 642
consensus_241#1      AATTGACGAGGAAGCACTTC--TGGTACGAGTGAACAAGGGC--TGGCAGTACATTGCAC 610
                       *  *  ***   ** *     * * ** *    *** ***  *    *   *      

consensus_241#0      CATGAATGGACGCGATGGACTGCCGGGCCCACCGGGTCTGCCC 685
consensus_241#1      TTGGAACGCTCGTG-CCGATTGCAACG---------------- 636
                        *** *  ** *   ** ***   *