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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2422#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 647 fasta sequence
[CCGCCCACGCGTCCGCTCTTTCGCAGCTCGACCTGTCGCAGTCGAAGCTGAAGCATCTGCACCCACCGACCGGCAGTGTGGCCCTGGCGCCCGCCGCCTACCTGAACGTGCTCGAGATACTGCTGCTGCACGAGAACCCGTGGCACTGCGACTGTGCGCTGCAGAAGGTGCTCCGCTACATCCACTTCTTCTCCCACTCGGACTACGAGGAGGAGGACGATACGCGCTGCGAAACGCCCCACGGGCTGGCCGCGATGCACCTGGTCGAGCTGTACTACATCGACGTGTGCGACCAGCCGGAGGAGGGCCCGGCTGGACCGACGTACGAAAAGCCGGCCTTCCTGCGCCCGGGCGCCATCTTTCTCTCCCTGCTGTCGGTCGGCATCGTCGTCGGGCTCGGCATCATCATCGGGCTGGTGATCGTGTGTCTCAAGCGCCGGCTGGCGGCCCAGGGGCTCGGCTTTACCTCCGCGCCGGTCCGCTACACCTCGGTGCGCGAAAGCACCACGTCCACCGTTTTTCAGCCGTAGAGCGTGGTGGCTTGTGGACTGTGAGTCGGCGGGAAAAAGGGAGAGACTGCAAAACGTTCCTTACACTAGGGCTGGTAGAGTAAACCGCGGTTGAACATCAAAATTCCACATTTAAGC]
[+] EMBL BM634733 [CCGCCCACGCGTCCGCTCTTTCGCAGCTCGACCTGTCGCAGTCGAAGCTGAAGCATCTGCACCCACCGACCGGCAGTGTGGCCCTGGCGCCCGCCGCCTACCTGAACGTGCTCGAGATACTGCTGCTGCACGAGAACCCGTGGCACTGCGACTGTGCGCTGCAGAAGGTGCTCCGCTACATCCACTTCTTCTCCCACTCGGACTACGAGGAGGAGGACGATACGCGCTGCGAAACGCCCCACGGGCTGGCCGCGATGCACCTGGTCGAGCTGTACTACATCGACGTGTGCGACCAGCCGGAGGAGGGCCCGGCTGGACCGACGTACGAAAAGCCGGCCTTCCTGCGCCCGGGCGCCATCTTTCTCTCCCTGCTGTCGGTCGGCATCGTCGTCGGGCTCGGCATCATCATCGGGCTGGTGATCGTGTGTCTCAAGCGCCGGCTGGCGGCCCAGGGGCTCGGCTTTACCTCCGCGCCGGTCCGCTACACCTCGGTGCGCGAAAGCACCACGTCCACCGTTTTTCAGCCGTAGAGCGTGGTGGCTTGTGGACTGTGAGTCGGCGGGAAAAAGGGAGAGACTGCAAAACGTTCCTTACACTAGGGCTGGTAGAGTAAACCGCGGTTGAACATCAAAATTCCACATTTAAGC]
consensusID : consensus_2422#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 486 fasta sequence
[TCGCCCGAGGTNTATCTGTGTNAGCTCGACTGTCGCAGTCGAAGCTGAAGCATCTGACCCACCGACCGGCAGTGTGGGCCTGCGCCCGCCGCCTACCTGAACGTGCTCGAGATACTGCTGCTGCACGAGAACCCGTGGCACTGCGACTGTGCGCTGCAAAGGTGCTCCGCTACATCCACTTCTTCTCCCACTCGGACTACGAGGAGGAGGACGATACGCGCTGCGAAACGCCCCACGGGCTGGCCTGCGATGCACCTGGTCGAGCTGTACTACATCTGACGTGTGCGACCAGCCGGAGTGAGTGGCCCGGCTGGACCGACGTACGAAAAGCCGGCTTCCTGCGCCCGGGCGCCATCTTTCTCTCCCTGCTGTCGGTCGGCATCGTCGTCGGGCTCGGATCATCATCGGGCTGGGTGATCGTGTGTCTCAAGCGCCGGCTGGGGGCCAGGGGCTCGGCTTTACCTCCGCGCCGGTCCGTACACCTCG]
[+] EMBL AL930049 [TCGCCCGAGGTNTATCTGTGTNAGCTCGACTGTCGCAGTCGAAGCTGAAGCATCTGACCCACCGACCGGCAGTGTGGGCCTGCGCCCGCCGCCTACCTGAACGTGCTCGAGATACTGCTGCTGCACGAGAACCCGTGGCACTGCGACTGTGCGCTGCAAAGGTGCTCCGCTACATCCACTTCTTCTCCCACTCGGACTACGAGGAGGAGGACGATACGCGCTGCGAAACGCCCCACGGGCTGGCCTGCGATGCACCTGGTCGAGCTGTACTACATCTGACGTGTGCGACCAGCCGGAGTGAGTGGCCCGGCTGGACCGACGTACGAAAAGCCGGCTTCCTGCGCCCGGGCGCCATCTTTCTCTCCCTGCTGTCGGTCGGCATCGTCGTCGGGCTCGGATCATCATCGGGCTGGGTGATCGTGTGTCTCAAGCGCCGGCTGGGGGCCAGGGGCTCGGCTTTACCTCCGCGCCGGTCCGTACACCTCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2422#0 CCGCCCACGCGTCCGCTCTTTCGCAGCTCGACCTGTCGCAGTCGAAGCTGAAGCATCTGC 60
consensus_2422#1 TCGCCCGAG-GTNTA-TCTGTGTNAGCTCGAC-TGTCGCAGTCGAAGCTGAAGCATCTG- 56
***** * ** *** * ******** **************************
consensus_2422#0 ACCCACCGACCGGCAGTGTGGCCCTGGCGCCCGCCGCCTACCTGAACGTGCTCGAGATAC 120
consensus_2422#1 ACCCACCGACCGGCAGTGTGGGCCTG-CGCCCGCCGCCTACCTGAACGTGCTCGAGATAC 115
********************* **** *********************************
consensus_2422#0 TGCTGCTGCACGAGAACCCGTGGCACTGCGACTGTGCGCTGCAGAAGGTGCTCCGCTACA 180
consensus_2422#1 TGCTGCTGCACGAGAACCCGTGGCACTGCGACTGTGCGCTGCA-AAGGTGCTCCGCTACA 174
******************************************* ****************
consensus_2422#0 TCCACTTCTTCTCCCACTCGGACTACGAGGAGGAGGACGATACGCGCTGCGAAACGCCCC 240
consensus_2422#1 TCCACTTCTTCTCCCACTCGGACTACGAGGAGGAGGACGATACGCGCTGCGAAACGCCCC 234
************************************************************
consensus_2422#0 ACGGGCTGGCC-GCGATGCACCTGGTCGAGCTGTACTACATC-GACGTGTGCGACCAGCC 298
consensus_2422#1 ACGGGCTGGCCTGCGATGCACCTGGTCGAGCTGTACTACATCTGACGTGTGCGACCAGCC 294
*********** ****************************** *****************
consensus_2422#0 GGAG-GAG-GGCCCGGCTGGACCGACGTACGAAAAGCCGGCCTTCCTGCGCCCGGGCGCC 356
consensus_2422#1 GGAGTGAGTGGCCCGGCTGGACCGACGTACGAAAAGCCGGC-TTCCTGCGCCCGGGCGCC 353
**** *** ******************************** ******************
consensus_2422#0 ATCTTTCTCTCCCTGCTGTCGGTCGGCATCGTCGTCGGGCTCGGCATCATCATCGGGCTG 416
consensus_2422#1 ATCTTTCTCTCCCTGCTGTCGGTCGGCATCGTCGTCGGGCTCGG-ATCATCATCGGGCTG 412
******************************************** ***************
consensus_2422#0 G-TGATCGTGTGTCTCAAGCGCCGGCTGGCGGCCCAGGGGCTCGGCTTTACCTCCGCGCC 475
consensus_2422#1 GGTGATCGTGTGTCTCAAGCGCCGGCTGGGGGCC-AGGGGCTCGGCTTTACCTCCGCGCC 471
* *************************** **** *************************
consensus_2422#0 GGTCCGCTACACCTCGGTGCGCGAAAGCACCACGTCCACCGTTTTTCAGCCGTAGAGCGT 535
consensus_2422#1 GGTCCG-TACACCTCG-------------------------------------------- 486
****** *********
consensus_2422#0 GGTGGCTTGTGGACTGTGAGTCGGCGGGAAAAAGGGAGAGACTGCAAAACGTTCCTTACA 595
consensus_2422#1 ------------------------------------------------------------
consensus_2422#0 CTAGGGCTGGTAGAGTAAACCGCGGTTGAACATCAAAATTCCACATTTAAGC 647
consensus_2422#1 ----------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||