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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2476#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 669 fasta sequence
[CCGCTCCTTGTTGGAAAGATCGCTCTGGCGAAGAAGAAACAATAAAAAAAGAAAAACTAACTCCCCAGGTCCGTTCGTGTTTGCGTGTGTGTGTGTATGTGCGTGTGAACTAATTACGCGTCGTCCCGGCTCGTCCCGCTTGGCCATCAAACATTCATAAACTCATACAAACTCACACTAGCAAAAACCTTTTTTCCGGCACCAGCTGATGCATACCAGGTGCAGTGAGAGTGAGTGAATGAGGGAAACGGTGGTGAACTAATCAGTGTTCAATACCAGCACCGGCAACGCCGTATTCATCGCCATCCTCATCCACACGCCAAGCGCTTCCTCCTGCAGCGACGCACCCAACTGCTCACAGTCCGGCAACTCGGAACGGTGTGCCGCCGCTGTGTGTGCCTGTGTCTGCCCTTAACCTTCTGCTCCGCGCTCGCGACCGCAGAGGCGACGACTGGACGCCGCCGCCGCCCATCCACCGTAGTGGAACGGTTTAGATGCACCGGCGACCACCGTGCTGCTGCGTACGACAACGCCGACGAGCAGCTCCGTGAGCGTGGCGTGCCGCTGGGACAACCACCGTTCGCGCTTTTTAATGCTTCTCTGACGCTCTTGCCGTCCCGCTCCGTTACTGCTGGCCTGCCGCTGCTGCTGCTGCTGCTACTGTTGCTG]
[+] EMBL BM647891 [CCGCTCCTTGTTGGAAAGATCGCTCTGGCGAAGAAGAAACAATAAAAAAAGAAAAACTAACTCCCCAGGTCCGTTCGTGTTTGCGTGTGTGTGTGTATGTGCGTGTGAACTAATTACGCGTCGTCCCGGCTCGTCCCGCTTGGCCATCAAACATTCATAAACTCATACAAACTCACACTAGCAAAAACCTTTTTTCCGGCACCAGCTGATGCATACCAGGTGCAGTGAGAGTGAGTGAATGAGGGAAACGGTGGTGAACTAATCAGTGTTCAATACCAGCACCGGCAACGCCGTATTCATCGCCATCCTCATCCACACGCCAAGCGCTTCCTCCTGCAGCGACGCACCCAACTGCTCACAGTCCGGCAACTCGGAACGGTGTGCCGCCGCTGTGTGTGCCTGTGTCTGCCCTTAACCTTCTGCTCCGCGCTCGCGACCGCAGAGGCGACGACTGGACGCCGCCGCCGCCCATCCACCGTAGTGGAACGGTTTAGATGCACCGGCGACCACCGTGCTGCTGCGTACGACAACGCCGACGAGCAGCTCCGTGAGCGTGGCGTGCCGCTGGGACAACCACCGTTCGCGCTTTTTAATGCTTCTCTGACGCTCTTGCCGTCCCGCTCCGTTACTGCTGGCCTGCCGCTGCTGCTGCTGCTGCTACTGTTGCTG]
consensusID : consensus_2476#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 659 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGCTCCGTGAGCGTGGCGTGCCGCTGGGACAACCACCGTTCGCGCTTTTTAATGCTTCTCTGACGCTCTTGCCGTCCCGCTCCGTTACTGCTGGCCTGCCGCTGCTGCTGCTGCTGCTACTGTTGCTGACACGATCCGTGCCACCGGACGGACTGCTCTGACCTCGCCTGAGTGAGTGAGCGGGTGTGTGGGTGTGTGTGTGCATGCGCTTCCCTAGCGAGCCGGTTCGGCAGAAGTGCAAGAAGGCAGCCGCCAGCCAAACACCGCAACAGCGGACAGTACGTTTCCCGCCCGCAGCTTAAGCTTCTCTTTAACCCCTACACGCTACTCTTTTTGCGCGCAGTACCAAACGTGGACCTTCGCCGGACAAAATGGCACCAACGACAACAATCGAAACCGTCACCATCACGCGACCACTGAAGGTCATTGCGTTCATCTGTGGCGTAATTGTCATCATTCTCATGATACTGGCCCTCACCTCCACCGACTGGCTGATGGCGGAGAGCTGGCGCCAGGGCCTGTTTGTGCACTGCATCGAGGAGGGGTACGAGCTGCCGCTACCGTTCAACCTGCAGGATCCGGCCGGCTGCTATCCAAGCCGCGATGTCGCCTACATCAAGGCGACGGCGGCGCT]
[+] EMBL BM595718 [CCGCGGACGCGTGGGCGGACGCGTGGGCTCCGTGAGCGTGGCGTGCCGCTGGGACAACCACCGTTCGCGCTTTTTAATGCTTCTCTGACGCTCTTGCCGTCCCGCTCCGTTACTGCTGGCCTGCCGCTGCTGCTGCTGCTGCTACTGTTGCTGACACGATCCGTGCCACCGGACGGACTGCTCTGACCTCGCCTGAGTGAGTGAGCGGGTGTGTGGGTGTGTGTGTGCATGCGCTTCCCTAGCGAGCCGGTTCGGCAGAAGTGCAAGAAGGCAGCCGCCAGCCAAACACCGCAACAGCGGACAGTACGTTTCCCGCCCGCAGCTTAAGCTTCTCTTTAACCCCTACACGCTACTCTTTTTGCGCGCAGTACCAAACGTGGACCTTCGCCGGACAAAATGGCACCAACGACAACAATCGAAACCGTCACCATCACGCGACCACTGAAGGTCATTGCGTTCATCTGTGGCGTAATTGTCATCATTCTCATGATACTGGCCCTCACCTCCACCGACTGGCTGATGGCGGAGAGCTGGCGCCAGGGCCTGTTTGTGCACTGCATCGAGGAGGGGTACGAGCTGCCGCTACCGTTCAACCTGCAGGATCCGGCCGGCTGCTATCCAAGCCGCGATGTCGCCTACATCAAGGCGACGGCGGCGCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2476#0 ----CCGCTCCTTGTTGGAAAGATCGCTCTGGCGAAGAAGAAACAATAAAAAAAGAAAAA 56
consensus_2476#1 CCGCGGACGCGTGGGCGGACGCGTGGGCTCCGTGAGCGTGGCGTGCCGCTGGGACAACCA 60
* * * * *** * * * ** * * ** *
consensus_2476#0 CTAACTCCCCAGGTCCGTTCGTGTTTGCGTGTGTGTGTGTATGTGCGTGTGAACTAATTA 116
consensus_2476#1 CCGTTCGCGCTTTTTAATGCTTCTCTG-ACGCTCTTGCCGTCCCGCTCCGTTACTGCTGG 119
* * * * * * * * ** * ** ** *** *
consensus_2476#0 CGCGTCGTCCCGGCTCGTCCCGCT--TGGCCATCAAAC-ATTCATAAACTCATACAAACT 173
consensus_2476#1 CCTGCCGCTGCTGCTGCTGCTGCTACTGTTGCTGACACGATCCGTGCCACCGGACGGACT 179
* * ** * *** * * *** ** * * ** ** * * * ** ***
consensus_2476#0 ----CACACTAGCAAAAACCTTTTTTCCGGCACCAGCTGATGCATAC-CAGGTGCAGTGA 228
consensus_2476#1 GCTCTGACCTCGCCTGAGTGAGTGAGCGGGTGTGTGGGTGTGTGTGTGCATGCGCTTCCC 239
** ** * * * ** * ** * ** * **
consensus_2476#0 GAGTGAGTGAATGAGGGAAACGGTGGTGAACTAATCAGTGTTCAATACCAGCACCGGCAA 288
consensus_2476#1 TAGCGAGCCGGTTCGGCAGA-AGTG--CAAGAAGGCAGCCGCCAGC-CAAACACCG-CAA 294
** *** * ** * * *** ** * *** ** * * ***** ***
consensus_2476#0 CGCCGTATTCATCGCCATCCTCATCCACACGCCAAGCGCTTCCTCCTGCAGCGACGCACC 348
consensus_2476#1 CAGCGGA--CAGTACGTTTCCCGCCCGCAGCTTAAGC---TTCTCTTTAACCCCTACACG 349
* ** * ** * * * * ** ** **** * *** * * * ***
consensus_2476#0 CAACTGCTCACAGTCCGGCAACTCGGAACGGTGTGCCGCCGCTGTGTGTGCCTGTGTCTG 408
consensus_2476#1 CTACTCTTTTTG--CGCGCAGTACCAAACG-TGGACCTTCGCCGGACAAAATGGCACCAA 406
* *** * * *** * **** ** ** *** * * *
consensus_2476#0 CCCTTAACCTTCTGCTCCGCGCTCGCGACCGCAGAGGCGACGACTGGACGCCGCCGCCGC 468
consensus_2476#1 CGAC-AACAATCGAAACCG---TCACCATCAC----GCGACCACTGAAGGTCATTGC-GT 457
* *** ** *** ** * * * * ***** **** * * * ** *
consensus_2476#0 CCATCCAC--CGTAGTGG--AACGGTTTAGATGCACCGGCGACCACCGTGCTGCTGCGTA 524
consensus_2476#1 TCATCTGTGGCGTAATTGTCATCATTCTCATGATACTGGCCCTCACC--TCCACCGACTG 515
**** **** * * * * * * ** *** **** * * * *
consensus_2476#0 CGACAACGCCGACGAGCAGCTCCGTGAGCGTGGCGTGCCGCTGGGACAACCACCGTTCGC 584
consensus_2476#1 -GCTGATGGCGGAGAGCTGGCGCCAGGGCCTGTTTGTGCACTGCATCGAGGAGGGGTACG 574
* * * ** **** * * * ** ** * *** * * * * *
consensus_2476#0 GCTTTTTAATGCTTCTCTGAC-GCTCTTGCCGTCCCGCT-CCGTTACTGCTGGCCTGCCG 642
consensus_2476#1 AGCTGCCGCTACCGTTCAACCTGCAGGATCCGGCCGGCTGCTATCCAAGCCGCGATGTCG 634
* * * ** * ** *** ** *** * * ** * ** **
consensus_2476#0 CTGCTGCTGCTGCTGCTACTGTTGCTG 669
consensus_2476#1 CCTACATCAAGGCGACGGCGGC-GCT- 659
* ** * * * ***
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||