These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2529#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 486 fasta sequence [CTCGTCGCGATTGCGATTGCTGGGTCACTAACCCTGTGCTGTTTGTTTGATTTGATCGTGTTGAAAAGCGCAGAGTGTGATTTCTCAATATTCCAGCTCAAAAATAGCAACTTGCGTATCGGTCCAAAGCCCTTTTTTGGTTGATAGCCTCTTTTTTGTTGATAGAATCTCACTTCTTCATGTGCAGTGGTGTTATCATCTGCCGTTGGTGTATGTGTGTGCGTGTGTTCATGTTTCTGTCTGTACAGCAGCACTATTATGAACATTGAAGCAGAACGTACCGCGACGGAGTATCTGGTCGACCAGGGTGTGCCGACGGCCAATGCCAACAAATCGCTGCTCAGCTTTCTCGCAATCAACGCTCTCGAGCTGAGTGCACCCGCCAGTCCCGTCCTGCTAGAATGTAACACTCCAACCGTTCCTCCCGGCTGGCTGCAGCTGTCCGGCCATCCAAAAAGCCATCGCCCCTCTAGCCAATGGGATCGT] [+] EMBL CNS08M3N [CTCGTCGCGATTGCGATTGCTGGGTCACTAACCCTGTGCTGTTTGTTTGATTTGATCGTGTTGAAAAGCGCAGAGTGTGATTTCTCAATATTCCAGCTCAAAAATAGCAACTTGCGTATCGGTCCAAAGCCCTTTTTTGGTTGATAGCCTCTTTTTTGTTGATAGAATCTCACTTCTTCATGTGCAGTGGTGTTATCATCTGCCGTTGGTGTATGTGTGTGCGTGTGTTCATGTTTCTGTCTGTACAGCAGCACTATTATGAACATTGAAGCAGAACGTACCGCGACGGAGTATCTGGTCGACCAGGGTGTGCCGACGGCCAATGCCAACAAATCGCTGCTCAGCTTTCTCGCAATCAACGCTCTCGAGCTGAGTGCACCCGCCAGTCCCGTCCTGCTAGAATGTAACACTCCAACCGTTCCTCCCGGCTGGCTGCAGCTGTCCGGCCATCCAAAAAGCCATCGCCCCTCTAGCCAATGGGATCGT] consensusID : consensus_2529#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 223 fasta sequence [CCGCGAGATACGGACGCCACACGGCGCTAGGGCACCTTTCCTCGTCGCGATTGCGATTGCTGGGTCACTAACCCTGTGCTGTTTGTTCGATTTGATCGTGTTGAAAAGGCAGAGTGTGATTTCTCAATATTCCAGCTCAAAAATAGCAACTTGCATATCGGTCCAAAGCCCTTTTTTGGTTGATAGAATCTCACATTTCTTCATGTGCAGTGGTGTTATCATC] [+] EMBL BM594370 [CCGCGAGATACGGACGCCACACGGCGCTAGGGCACCTTTCCTCGTCGCGATTGCGATTGCTGGGTCACTAACCCTGTGCTGTTTGTTCGATTTGATCGTGTTGAAAAGGCAGAGTGTGATTTCTCAATATTCCAGCTCAAAAATAGCAACTTGCATATCGGTCCAAAGCCCTTTTTTGGTTGATAGAATCTCACATTTCTTCATGTGCAGTGGTGTTATCATC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2529#0 ----------------------------------------CTCGTCGCGATTGCGATTGC 20 consensus_2529#1 CCGCGAGATACGGACGCCACACGGCGCTAGGGCACCTTTCCTCGTCGCGATTGCGATTGC 60 ******************** consensus_2529#0 TGGGTCACTAACCCTGTGCTGTTTGTTTGATTTGATCGTGTTGAAAAGCGCAGAGTGTGA 80 consensus_2529#1 TGGGTCACTAACCCTGTGCTGTTTGTTCGATTTGATCGTGTTGAAAAG-GCAGAGTGTGA 119 *************************** ******************** *********** consensus_2529#0 TTTCTCAATATTCCAGCTCAAAAATAGCAACTTGCGTATCGGTCCAAAGCCCTTTTTTGG 140 consensus_2529#1 TTTCTCAATATTCCAGCTCAAAAATAGCAACTTGCATATCGGTCCAAAGCCCTTTTTTGG 179 *********************************** ************************ consensus_2529#0 TTGATAGCCTCTTTTTTGTTGATAGAATCTCACTTCTTCATGTGCAGTGGTGTTATCATC 200 consensus_2529#1 TTGATAGAATCT----------------CACATTTCTTCATGTGCAGTGGTGTTATCATC 223 ******* *** * ** *************************** consensus_2529#0 TGCCGTTGGTGTATGTGTGTGCGTGTGTTCATGTTTCTGTCTGTACAGCAGCACTATTAT 260 consensus_2529#1 ------------------------------------------------------------ consensus_2529#0 GAACATTGAAGCAGAACGTACCGCGACGGAGTATCTGGTCGACCAGGGTGTGCCGACGGC 320 consensus_2529#1 ------------------------------------------------------------ consensus_2529#0 CAATGCCAACAAATCGCTGCTCAGCTTTCTCGCAATCAACGCTCTCGAGCTGAGTGCACC 380 consensus_2529#1 ------------------------------------------------------------ consensus_2529#0 CGCCAGTCCCGTCCTGCTAGAATGTAACACTCCAACCGTTCCTCCCGGCTGGCTGCAGCT 440 consensus_2529#1 ------------------------------------------------------------ consensus_2529#0 GTCCGGCCATCCAAAAAGCCATCGCCCCTCTAGCCAATGGGATCGT 486 consensus_2529#1 ---------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||