These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2572#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 410 fasta sequence [CCCAGGGANTTNGCGGGCTGCCCATCATGCTCGCCGGCAAGGCATACGTTCAACAGTGGCGGACTGTGTCTAAAGAACCCGGAAGATATGGCCAAGTATCGGGCGAGCATTGCCGGCGCTGCGACGGTGGTAGCGACGATTCGGGCAGCTGCCGCCCTATCTCTGCCCGTTAACCTGGTTGGGCTGATCCCGCTGTGCGAGAACATGCCCTCGGGAATGGCCTTCAAGCCGGGCGACGTGATTACGGCAATGAACGGGAAGACGGTGGCGGTGCACGACACCAACAATGCCGGCCGGCTGATGCTAGCCGACGCGTTCGTGTACGGGCAGACCACTTTCAAGCCGAAAATTGTCGTCGACGTGGCCACGCTCTCGGACGGCATTGTGCATGCGCTCGGTGGTGCTGCTAG] [+] EMBL AL933283 [CCCAGGGANTTNGCGGGCTGCCCATCATGCTCGCCGGCAAGGCATACGTTCAACAGTGGCGGACTGTGTCTAAAGAACCCGGAAGATATGGCCAAGTATCGGGCGAGCATTGCCGGCGCTGCGACGGTGGTAGCGACGATTCGGGCAGCTGCCGCCCTATCTCTGCCCGTTAACCTGGTTGGGCTGATCCCGCTGTGCGAGAACATGCCCTCGGGAATGGCCTTCAAGCCGGGCGACGTGATTACGGCAATGAACGGGAAGACGGTGGCGGTGCACGACACCAACAATGCCGGCCGGCTGATGCTAGCCGACGCGTTCGTGTACGGGCAGACCACTTTCAAGCCGAAAATTGTCGTCGACGTGGCCACGCTCTCGGACGGCATTGTGCATGCGCTCGGTGGTGCTGCTAG] consensusID : consensus_2572#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 385 fasta sequence [ACCAGCTTGCGGATGGAAAAGCATGTCTGCTTCTGTCGTCGCCCGGAGCTCGTGCGAGCCGCCGATCTTCCTCGAGATCAGCTACTGTGGCGATGACAAGGCGGGCCGCCCCATCATGCTCGCCGGCAAGGGCATGACGTTCAACAGTGGCGGACTGTGTCTAAAGAACCCGGAAGATATGGCCAAGTATCGGGCGAGCATTGCCGGCGCTGCGACGGTGGTAGCGACGATTCGGGCAGGCTGCCGCCCTATCTCTGCCCGTTAACCTGGGTTGGGCTGATCCCGCTGTGCGAGAACATGCCCTCGGGAATGGGCTTCAAGCCGGGCGACGTGATTACGGCAATGAACGGGAAGACGGTGGCGGTGCACGAAACCAAAAAATGCC] [+] EMBL AL934577 [ACCAGCTTGCGGATGGAAAAGCATGTCTGCTTCTGTCGTCGCCCGGAGCTCGTGCGAGCCGCCGATCTTCCTCGAGATCAGCTACTGTGGCGATGACAAGGCGGGCCGCCCCATCATGCTCGCCGGCAAGGGCATGACGTTCAACAGTGGCGGACTGTGTCTAAAGAACCCGGAAGATATGGCCAAGTATCGGGCGAGCATTGCCGGCGCTGCGACGGTGGTAGCGACGATTCGGGCAGGCTGCCGCCCTATCTCTGCCCGTTAACCTGGGTTGGGCTGATCCCGCTGTGCGAGAACATGCCCTCGGGAATGGGCTTCAAGCCGGGCGACGTGATTACGGCAATGAACGGGAAGACGGTGGCGGTGCACGAAACCAAAAAATGCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2572#0 ------------------------------------------------------------ consensus_2572#1 ACCAGCTTGCGGATGGAAAAGCATGTCTGCTTCTGTCGTCGCCCGGAGCTCGTGCGAGCC 60 consensus_2572#0 ----------------------------CCCAGGGANTTNGCGGGCTGCCC-ATCATGCT 31 consensus_2572#1 GCCGATCTTCCTCGAGATCAGCTACTGTGGCGATGACAAGGCGGGCCGCCCCATCATGCT 120 * ** ****** **** ******** consensus_2572#0 CGCCGGCAAGG-CAT-ACGTTCAACAGTGGCGGACTGTGTCTAAAGAACCCGGAAGATAT 89 consensus_2572#1 CGCCGGCAAGGGCATGACGTTCAACAGTGGCGGACTGTGTCTAAAGAACCCGGAAGATAT 180 *********** *** ******************************************** consensus_2572#0 GGCCAAGTATCGGGCGAGCATTGCCGGCGCTGCGACGGTGGTAGCGACGATTCGGGCAG- 148 consensus_2572#1 GGCCAAGTATCGGGCGAGCATTGCCGGCGCTGCGACGGTGGTAGCGACGATTCGGGCAGG 240 *********************************************************** consensus_2572#0 CTGCCGCCCTATCTCTGCCCGTTAACCTGG-TTGGGCTGATCCCGCTGTGCGAGAACATG 207 consensus_2572#1 CTGCCGCCCTATCTCTGCCCGTTAACCTGGGTTGGGCTGATCCCGCTGTGCGAGAACATG 300 ****************************** ***************************** consensus_2572#0 CCCTCGGGAATGGCCTTCAAGCCGGGCGACGTGATTACGGCAATGAACGGGAAGACGGTG 267 consensus_2572#1 CCCTCGGGAATGGGCTTCAAGCCGGGCGACGTGATTACGGCAATGAACGGGAAGACGGTG 360 ************* ********************************************** consensus_2572#0 GCGGTGCACGACACCAACAA-TGCCGGCCGGCTGATGCTAGCCGACGCGTTCGTGTACGG 326 consensus_2572#1 GCGGTGCACGAAACCAAAAAATGCC----------------------------------- 385 *********** ***** ** **** consensus_2572#0 GCAGACCACTTTCAAGCCGAAAATTGTCGTCGACGTGGCCACGCTCTCGGACGGCATTGT 386 consensus_2572#1 ------------------------------------------------------------ consensus_2572#0 GCATGCGCTCGGTGGTGCTGCTAG 410 consensus_2572#1 ------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||