These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2573#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 508 fasta sequence [TCGGCCCAGAAACTCTCACTGAAAGACGCCAAGTGATCGTGTGTGGTGATAAACTGTGTGATTTTTTAGTCATGGAGCGCTTTCTACTACTGTTGCTGTTCGTGGCGATCGTGCTCGGTGAAACAGCGAACGAAACCTACGTCACCAAGTACGATAACATCGATCTGGAGGAAATTTTCAGCAGCAAACGTTTGATGGACAACTACATGAACTGTCTGAAAAACGTTGGTCCTTGTACGCCCGACGGCCGAAGCTGAAAGACAACCTTCCCGATGCGCTGATGAGCGATTGCGTGAAATGCTCCGAAAAGCAACGGATCGGTTCGGACAAGGTGATCAACGTTCATCGTCGCCAACCGGCCGGACGATTTCGCGATCCTCGAGCAGCTGTACGATCCGACCGGCGAGTACCGGCGGAAGTACATGCCAGTCGGACGCACTGGCCGAGCACGGTGAACGCACGGAAAGGACCCGCGGACCTTACTCCGGTTCCGCACCCCCGGGCCGCA] [+] EMBL AL934568 [TCGGCCCAGAAACTCTCACTGAAAGACGCCAAGTGATCGTGTGTGGTGATAAACTGTGTGATTTTTTAGTCATGGAGCGCTTTCTACTACTGTTGCTGTTCGTGGCGATCGTGCTCGGTGAAACAGCGAACGAAACCTACGTCACCAAGTACGATAACATCGATCTGGAGGAAATTTTCAGCAGCAAACGTTTGATGGACAACTACATGAACTGTCTGAAAAACGTTGGTCCTTGTACGCCCGACGGCCGAAGCTGAAAGACAACCTTCCCGATGCGCTGATGAGCGATTGCGTGAAATGCTCCGAAAAGCAACGGATCGGTTCGGACAAGGTGATCAACGTTCATCGTCGCCAACCGGCCGGACGATTTCGCGATCCTCGAGCAGCTGTACGATCCGACCGGCGAGTACCGGCGGAAGTACATGCCAGTCGGACGCACTGGCCGAGCACGGTGAACGCACGGAAAGGACCCGCGGACCTTACTCCGGTTCCGCACCCCCGGGCCGCA] consensusID : consensus_2573#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 251 fasta sequence [GTTTTTAGTAATGGAGCGCTTTCTACTACTGTTGTTGTTCGTGGCGATCGTGCTCGGTGAAACAGCGAACGAAACCTACGTCACCAAGTACGATAACATCGATCTGGAGGAAATTTTCAGCAGCAAACGTTTGATGGACAACTACATGAACTGTCTGAAAAACGTTGGTCCTTGTACGCCCGACGGCCGAGAGCTGAAAGGTAGGTTGGTGTGGGCGTGAAAGGCTTGCCTCGCGCTCGTGCTCGACCCGG] [-] EMBL BM639912 [GTTTTTAGTAATGGAGCGCTTTCTACTACTGTTGTTGTTCGTGGCGATCGTGCTCGGTGAAACAGCGAACGAAACCTACGTCACCAAGTACGATAACATCGATCTGGAGGAAATTTTCAGCAGCAAACGTTTGATGGACAACTACATGAACTGTCTGAAAAACGTTGGTCCTTGTACGCCCGACGGCCGAGAGCTGAAAGGTAGGTTGGTGTGGGCGTGAAAGGCTTGCCTCGCGCTCGTGCTCGACCCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2573#0 TCGGCCCAGAAACTCTCACTGAAAGACGCCAAGTGATCGTGTGTGGTGATAAACTGTGTG 60 consensus_2573#1 ------------------------------------------------------------ consensus_2573#0 ATTTTTTAGTCATGGAGCGCTTTCTACTACTGTTGCTGTTCGTGGCGATCGTGCTCGGTG 120 consensus_2573#1 -GTTTTTAGTAATGGAGCGCTTTCTACTACTGTTGTTGTTCGTGGCGATCGTGCTCGGTG 59 ******** ************************ ************************ consensus_2573#0 AAACAGCGAACGAAACCTACGTCACCAAGTACGATAACATCGATCTGGAGGAAATTTTCA 180 consensus_2573#1 AAACAGCGAACGAAACCTACGTCACCAAGTACGATAACATCGATCTGGAGGAAATTTTCA 119 ************************************************************ consensus_2573#0 GCAGCAAACGTTTGATGGACAACTACATGAACTGTCTGAAAAACGTTGGTCCTTGTACGC 240 consensus_2573#1 GCAGCAAACGTTTGATGGACAACTACATGAACTGTCTGAAAAACGTTGGTCCTTGTACGC 179 ************************************************************ consensus_2573#0 CCGACGGCCGA-AGCTGAAAGACAACCTTCCCGATGCGCTGATGAGCGATTGCGTGAAAT 299 consensus_2573#1 CCGACGGCCGAGAGCTGAAAGGTAG------------GTTGGTGTGGGCGTGAAAGGCTT 227 *********** ********* * * ** ** * * ** * * consensus_2573#0 GCTCCGAAAAGCAACGGATCGGTTCGGACAAGGTGATCAACGTTCATCGTCGCCAACCGG 359 consensus_2573#1 GCCTCGC---GCTCGTGCTCGACCCGG--------------------------------- 251 ** ** ** * *** *** consensus_2573#0 CCGGACGATTTCGCGATCCTCGAGCAGCTGTACGATCCGACCGGCGAGTACCGGCGGAAG 419 consensus_2573#1 ------------------------------------------------------------ consensus_2573#0 TACATGCCAGTCGGACGCACTGGCCGAGCACGGTGAACGCACGGAAAGGACCCGCGGACC 479 consensus_2573#1 ------------------------------------------------------------ consensus_2573#0 TTACTCCGGTTCCGCACCCCCGGGCCGCA 508 consensus_2573#1 ----------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||