These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2591#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 740 fasta sequence [TGAAAAATATTGCACCTTAGTGCTAATTTTATATTCAGAAGGAACGACTTCTGCCGTATTGCTTAGTGACAAATTTGTGTAGTAAAACAACCCAATTTGAATAGACGGTACACAAATAAGAGTACACAAATAAAACATAAGAATAACTTGTTTATGCCTCATTCATACTCAATGATAAAAAAGCTGCATTTTACAATCAATTTTGATGGTAGCTTTATAACATGCAAGTAGTTTCAGTAGGTTCGGTTGGCATTATCAAACGGAGTTGGAACGACATCAAACGGTACAGCAGGCAATGGATTTGTTTTGATTTTGCGCGAGATGAGTATCGTTTATTCCCCAAATACTGCGATTCTTTTACTTCTTGGTTTTGTGGCCACTTCTTCGAATATCATATAACACGGTTGGTGGGACGTCACATCATCCGATATTGTTATGCGTACGCGTTCTTGCATGACATGAAGTTCGTATTGATTTATTTTTTTATCCATTCAAAGGAAAGCCTAGTTTGTGATACAACAGGGACACAAGACGACGCGATCAAAAGTTTTGTTGTAGAATGTTATTTCAAAAATGTGCTTTATGAGATAAGTTCTATTTGATAATGTTATGATTAGAAAGGGAAATATTCGAATCTTAAAATAATATATGAGAAAATAATAACAAATCTTCAAAGCTTGTATTTATTGTTGTTAAAAATATAGTTTTACTTTATATTATTTAACATTGAATGCACATGA] [+] EMBL BX608549 [TGAAAAATATTGCACCTTAGTGCTAATTTTATATTCAGAAGGAACGACTTCTGCCGTATTGCTTAGTGACAAATTTGTGTAGTAAAACAACCCAATTTGAATAGACGGTACACAAATAAGAGTACACAAATAAAACATAAGAATAACTTGTTTATGCCTCATTCATACTCAATGATAAAAAAGCTGCATTTTACAATCAATTTTGATGGTAGCTTTATAACATGCAAGTAGTTTCAGTAGGTTCGGTTGGCATTATCAAACGGAGTTGGAACGACATCAAACGGTACAGCAGGCAATGGATTTGTTTTGATTTTGCGCGAGATGAGTATCGTTTATTCCCCAAATACTGCGATTCTTTTACTTCTTGGTTTTGTGGCCACTTCTTCGAATATCATATAACACGGTTGGTGGGACGTCACATCATCCGATATTGTTATGCGTACGCGTTCTTGCATGACATGAAGTTCGTATTGATTTATTTTTTTATCCATTCAAAGGAAAGCCTAGTTTGTGATACAACAGGGACACAAGACGACGCGATCAAAAGTTTTGTTGTAGAATGTTATTTCAAAAATGTGCTTTATGAGATAAGTTCTATTTGATAATGTTATGATTAGAAAGGGAAATATTCGAATCTTAAAATAATATATGAGAAAATAATAACAAATCTTCAAAGCTTGTATTTATTGTTGTTAAAAATATAGTTTTACTTTATATTATTTAACATTGAATGCACATGA] consensusID : consensus_2591#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 99 fasta sequence [CCGCCCACGCGTCCGGTAGAATGTTATTTCAAAAATGTGCTTTATGAGATAAGTTCTATTTGATAATGTTATGATTAGAAAGGGTATGATTCGAATCTT] [+] EMBL BM637358 [CCGCCCACGCGTCCGGTAGAATGTTATTTCAAAAATGTGCTTTATGAGATAAGTTCTATTTGATAATGTTATGATTAGAAAGGGTATGATTCGAATCTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2591#0 TGAAAAATATTGCACCTTAGTGCTAATTTTATATTCAGAAGGAACGACTTCTGCCGTATT 60 consensus_2591#1 ------------------------------------------------------------ consensus_2591#0 GCTTAGTGACAAATTTGTGTAGTAAAACAACCCAATTTGAATAGACGGTACACAAATAAG 120 consensus_2591#1 ------------------------------------------------------------ consensus_2591#0 AGTACACAAATAAAACATAAGAATAACTTGTTTATGCCTCATTCATACTCAATGATAAAA 180 consensus_2591#1 ------------------------------------------------------------ consensus_2591#0 AAGCTGCATTTTACAATCAATTTTGATGGTAGCTTTATAACATGCAAGTAGTTTCAGTAG 240 consensus_2591#1 ------------------------------------------------------------ consensus_2591#0 GTTCGGTTGGCATTATCAAACGGAGTTGGAACGACATCAAACGGTACAGCAGGCAATGGA 300 consensus_2591#1 ------------------------------------------------------------ consensus_2591#0 TTTGTTTTGATTTTGCGCGAGATGAGTATCGTTTATTCCCCAAATACTGCGATTCTTTTA 360 consensus_2591#1 ------------------------------------------------------------ consensus_2591#0 CTTCTTGGTTTTGTGGCCACTTCTTCGAATATCATATAACACGGTTGGTGGGACGTCACA 420 consensus_2591#1 ------------------------------------------------------------ consensus_2591#0 TCATCCGATATTGTTATGCGTACGCGTTCTTGCATGACATGAAGTTCGTATTGATTTATT 480 consensus_2591#1 ------------------------------------------------------------ consensus_2591#0 TTTTTATCCATTCAAAGGAAAGCCTAGTTTGTGATACAACAGGGACACAAGACGACGCGA 540 consensus_2591#1 --------------------------------------------------------CCGC 4 ** consensus_2591#0 TCAAAAGTTTTGTTGTAGAATGTTATTTCAAAAATGTGCTTTATGAGATAAGTTCTATTT 600 consensus_2591#1 CCACGCGTCCGG---TAGAATGTTATTTCAAAAATGTGCTTTATGAGATAAGTTCTATTT 61 ** ** * ********************************************* consensus_2591#0 GATAATGTTATGATTAGAAAGGGAAATATTCGAATCTTAAAATAATATATGAGAAAATAA 660 consensus_2591#1 GATAATGTTATGATTAGAAAGGGTATGATTCGAATCTT---------------------- 99 *********************** * *********** consensus_2591#0 TAACAAATCTTCAAAGCTTGTATTTATTGTTGTTAAAAATATAGTTTTACTTTATATTAT 720 consensus_2591#1 ------------------------------------------------------------ consensus_2591#0 TTAACATTGAATGCACATGA 740 consensus_2591#1 -------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||