cluster # 2690

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Anopheles gambiae
cluster # 2690 cluster # 2690 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2690#0 length = 680 sequences # 1

consensus_2690#1 length = 639 sequences # 1

consensusID : consensus_2690#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 680
fasta sequence

                              [CCGGAACATTACGGAGGTGCCGGGCAGCGAGGTGCCGGACTCGTCCAGCTTCCACAGCAACGAAAGCAATGAATCGCACCCGAAAGCTAGTCTTCTTCCGCCGATTCTAGGACCGGTAGATTCGACGCGAGACATCGAAACGCTGAACGAGGATAACGAGTCGGAGTACGTGGACGACTCGGAGTGTGATCAGAGTGAGCAGCCGCTTTCGTTGGGCTTCGAGCAGAACTCCTCCATATCCTGCCTGAACCCGCTCGACAGTGGCAGTGAAGACTATAGATTTAACACAGCTGATAGTTATCTGCGTCATCCGAACAGCTACTTGCCGAAGTATAACATACAGAGCGAAACGGAGGGCGAAAATGTGCCACTGACGGGCCGGAAGCCGCTGAACGGGCTCGAGATCGGCCGGCACCAGCTGGTCGAGTCGGACGACGACGACGTCGAGTCGTACGGCTTTCCCCAAACGCGCCGGAACCGTCGCGAACCCAGTGATATCGATTTAGTTTTAAAAACTGACGAAGGCAGCTCTCTGCTAAGCCATTCCCGCACGCTGAACAGCTCCAATCACTCGAACAGTGATCTCTCCACCCAGCTGTGCGAGATCGATGACTCCGAGTACGAGGAGAGCCATCATCAGCAGCAGCAACCCCCGCACCACCATCCCCATCATCATCATC]

[+] EMBL BM592632             [CCGGAACATTACGGAGGTGCCGGGCAGCGAGGTGCCGGACTCGTCCAGCTTCCACAGCAACGAAAGCAATGAATCGCACCCGAAAGCTAGTCTTCTTCCGCCGATTCTAGGACCGGTAGATTCGACGCGAGACATCGAAACGCTGAACGAGGATAACGAGTCGGAGTACGTGGACGACTCGGAGTGTGATCAGAGTGAGCAGCCGCTTTCGTTGGGCTTCGAGCAGAACTCCTCCATATCCTGCCTGAACCCGCTCGACAGTGGCAGTGAAGACTATAGATTTAACACAGCTGATAGTTATCTGCGTCATCCGAACAGCTACTTGCCGAAGTATAACATACAGAGCGAAACGGAGGGCGAAAATGTGCCACTGACGGGCCGGAAGCCGCTGAACGGGCTCGAGATCGGCCGGCACCAGCTGGTCGAGTCGGACGACGACGACGTCGAGTCGTACGGCTTTCCCCAAACGCGCCGGAACCGTCGCGAACCCAGTGATATCGATTTAGTTTTAAAAACTGACGAAGGCAGCTCTCTGCTAAGCCATTCCCGCACGCTGAACAGCTCCAATCACTCGAACAGTGATCTCTCCACCCAGCTGTGCGAGATCGATGACTCCGAGTACGAGGAGAGCCATCATCAGCAGCAGCAACCCCCGCACCACCATCCCCATCATCATCATC]




>consensus_2690#0
CCGGAACATTACGGAGGTGCCGGGCAGCGAGGTGCCGGACTCGTCCAGCTTCCACAGCAA
CGAAAGCAATGAATCGCACCCGAAAGCTAGTCTTCTTCCGCCGATTCTAGGACCGGTAGA
TTCGACGCGAGACATCGAAACGCTGAACGAGGATAACGAGTCGGAGTACGTGGACGACTC
GGAGTGTGATCAGAGTGAGCAGCCGCTTTCGTTGGGCTTCGAGCAGAACTCCTCCATATC
CTGCCTGAACCCGCTCGACAGTGGCAGTGAAGACTATAGATTTAACACAGCTGATAGTTA
TCTGCGTCATCCGAACAGCTACTTGCCGAAGTATAACATACAGAGCGAAACGGAGGGCGA
AAATGTGCCACTGACGGGCCGGAAGCCGCTGAACGGGCTCGAGATCGGCCGGCACCAGCT
GGTCGAGTCGGACGACGACGACGTCGAGTCGTACGGCTTTCCCCAAACGCGCCGGAACCG
TCGCGAACCCAGTGATATCGATTTAGTTTTAAAAACTGACGAAGGCAGCTCTCTGCTAAG
CCATTCCCGCACGCTGAACAGCTCCAATCACTCGAACAGTGATCTCTCCACCCAGCTGTG
CGAGATCGATGACTCCGAGTACGAGGAGAGCCATCATCAGCAGCAGCAACCCCCGCACCA
CCATCCCCATCATCATCATC

consensusID : consensus_2690#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 639
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCGTAACATACAGAGCGAAACGGAGGGCGAAAATGTGCCACTGACGGGCCGGAAGCCGCTGAACGGGCTCGAGATCGGCCGGCACCAGCTGGTCGAGTCGGACGACGACGACGTCGAGTCGTACGGCTTTCCCCAAACGCGCCGGAACCGTCGCGAACCCAGTGATATCGATTTAGTTTTAAAAACTGACGAAGGCAGCTCTCTGCTAAGCCATTCCCGCACGCTGAACAGCTCCAATCACTCGAACAGTGATCTCTCCACCCAGCTGTGCGAGATCGATGACTCCGAGTACGAGGAGAGCCATCATCAGCAGCAGCAACCCCCGCACCACCATCCCCATCATCATCATCATCACCAGCATCACCATCATCAGCTCCTGCCACCGCAGGCGAACGTGTCGGCCGGTGGTTCGTCCGGAGGTGGCAGTGTCGCTTCGACCAGCGCCGGCAGTACCGGTGCGACCGCCAAACCGAAGCAACAGAAGGTCAAGTGGAGCAACGTCGTCCAGCAGACGGAAGTTTGACAGCGGCAGCTAATCGATGACAGCAGCAGCAGCAGCAGCACCCGCCCACAGGTGGCGCTAACAGATAAGACTTATTTTACTACTTCTATTAC]

[+] EMBL BM584959             [CCGCCCACGCGTCCGCCCACGCGTCCGTAACATACAGAGCGAAACGGAGGGCGAAAATGTGCCACTGACGGGCCGGAAGCCGCTGAACGGGCTCGAGATCGGCCGGCACCAGCTGGTCGAGTCGGACGACGACGACGTCGAGTCGTACGGCTTTCCCCAAACGCGCCGGAACCGTCGCGAACCCAGTGATATCGATTTAGTTTTAAAAACTGACGAAGGCAGCTCTCTGCTAAGCCATTCCCGCACGCTGAACAGCTCCAATCACTCGAACAGTGATCTCTCCACCCAGCTGTGCGAGATCGATGACTCCGAGTACGAGGAGAGCCATCATCAGCAGCAGCAACCCCCGCACCACCATCCCCATCATCATCATCATCACCAGCATCACCATCATCAGCTCCTGCCACCGCAGGCGAACGTGTCGGCCGGTGGTTCGTCCGGAGGTGGCAGTGTCGCTTCGACCAGCGCCGGCAGTACCGGTGCGACCGCCAAACCGAAGCAACAGAAGGTCAAGTGGAGCAACGTCGTCCAGCAGACGGAAGTTTGACAGCGGCAGCTAATCGATGACAGCAGCAGCAGCAGCAGCACCCGCCCACAGGTGGCGCTAACAGATAAGACTTATTTTACTACTTCTATTAC]




>consensus_2690#1
CCGCCCACGCGTCCGCCCACGCGTCCGTAACATACAGAGCGAAACGGAGGGCGAAAATGT
GCCACTGACGGGCCGGAAGCCGCTGAACGGGCTCGAGATCGGCCGGCACCAGCTGGTCGA
GTCGGACGACGACGACGTCGAGTCGTACGGCTTTCCCCAAACGCGCCGGAACCGTCGCGA
ACCCAGTGATATCGATTTAGTTTTAAAAACTGACGAAGGCAGCTCTCTGCTAAGCCATTC
CCGCACGCTGAACAGCTCCAATCACTCGAACAGTGATCTCTCCACCCAGCTGTGCGAGAT
CGATGACTCCGAGTACGAGGAGAGCCATCATCAGCAGCAGCAACCCCCGCACCACCATCC
CCATCATCATCATCATCACCAGCATCACCATCATCAGCTCCTGCCACCGCAGGCGAACGT
GTCGGCCGGTGGTTCGTCCGGAGGTGGCAGTGTCGCTTCGACCAGCGCCGGCAGTACCGG
TGCGACCGCCAAACCGAAGCAACAGAAGGTCAAGTGGAGCAACGTCGTCCAGCAGACGGA
AGTTTGACAGCGGCAGCTAATCGATGACAGCAGCAGCAGCAGCAGCACCCGCCCACAGGT
GGCGCTAACAGATAAGACTTATTTTACTACTTCTATTAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2690#0      CCGGAACATTACGGAGGTGCCGGGCAGCGAGGTGCCGGACTCGTCCAGCTTCCACAGCAA 60
consensus_2690#1      ------------------------------------------------------------
                                                                                  

consensus_2690#0      CGAAAGCAATGAATCGCACCCGAAAGCTAGTCTTCTTCCGCCGATTCTAGGACCGGTAGA 120
consensus_2690#1      ------------------------------------------------------------
                                                                                  

consensus_2690#0      TTCGACGCGAGACATCGAAACGCTGAACGAGGATAACGAGTCGGAGTACGTGGACGACTC 180
consensus_2690#1      ------------------------------------------------------------
                                                                                  

consensus_2690#0      GGAGTGTGATCAGAGTGAGCAGCCGCTTTCGTTGGGCTTCGAGCAGAACTCCTCCATATC 240
consensus_2690#1      ------------------------------------------------------------
                                                                                  

consensus_2690#0      CTGCCTGAACCCGCTCGACAGTGGCAGTGAAGACTATAGATTTAACACAGCTGATAGTTA 300
consensus_2690#1      ------------------------------------------------------------
                                                                                  

consensus_2690#0      TCTGCGTCATCCGAACAGCTACTTGCCGAAGTATAACATACAGAGCGAAACGGAGGGCGA 360
consensus_2690#1      ------CCGCCCACGCGTCCGCCCACGCGTCCGTAACATACAGAGCGAAACGGAGGGCGA 54
                             *  **   *  *  *   *       ***************************

consensus_2690#0      AAATGTGCCACTGACGGGCCGGAAGCCGCTGAACGGGCTCGAGATCGGCCGGCACCAGCT 420
consensus_2690#1      AAATGTGCCACTGACGGGCCGGAAGCCGCTGAACGGGCTCGAGATCGGCCGGCACCAGCT 114
                      ************************************************************

consensus_2690#0      GGTCGAGTCGGACGACGACGACGTCGAGTCGTACGGCTTTCCCCAAACGCGCCGGAACCG 480
consensus_2690#1      GGTCGAGTCGGACGACGACGACGTCGAGTCGTACGGCTTTCCCCAAACGCGCCGGAACCG 174
                      ************************************************************

consensus_2690#0      TCGCGAACCCAGTGATATCGATTTAGTTTTAAAAACTGACGAAGGCAGCTCTCTGCTAAG 540
consensus_2690#1      TCGCGAACCCAGTGATATCGATTTAGTTTTAAAAACTGACGAAGGCAGCTCTCTGCTAAG 234
                      ************************************************************

consensus_2690#0      CCATTCCCGCACGCTGAACAGCTCCAATCACTCGAACAGTGATCTCTCCACCCAGCTGTG 600
consensus_2690#1      CCATTCCCGCACGCTGAACAGCTCCAATCACTCGAACAGTGATCTCTCCACCCAGCTGTG 294
                      ************************************************************

consensus_2690#0      CGAGATCGATGACTCCGAGTACGAGGAGAGCCATCATCAGCAGCAGCAACCCCCGCACCA 660
consensus_2690#1      CGAGATCGATGACTCCGAGTACGAGGAGAGCCATCATCAGCAGCAGCAACCCCCGCACCA 354
                      ************************************************************

consensus_2690#0      CCATCCCCATCATCATCATC---------------------------------------- 680
consensus_2690#1      CCATCCCCATCATCATCATCATCACCAGCATCACCATCATCAGCTCCTGCCACCGCAGGC 414
                      ********************                                        

consensus_2690#0      ------------------------------------------------------------
consensus_2690#1      GAACGTGTCGGCCGGTGGTTCGTCCGGAGGTGGCAGTGTCGCTTCGACCAGCGCCGGCAG 474
                                                                                  

consensus_2690#0      ------------------------------------------------------------
consensus_2690#1      TACCGGTGCGACCGCCAAACCGAAGCAACAGAAGGTCAAGTGGAGCAACGTCGTCCAGCA 534
                                                                                  

consensus_2690#0      ------------------------------------------------------------
consensus_2690#1      GACGGAAGTTTGACAGCGGCAGCTAATCGATGACAGCAGCAGCAGCAGCAGCACCCGCCC 594
                                                                                  

consensus_2690#0      ---------------------------------------------
consensus_2690#1      ACAGGTGGCGCTAACAGATAAGACTTATTTTACTACTTCTATTAC 639