cluster # 2725

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Anopheles gambiae
cluster # 2725 cluster # 2725 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2725#0 length = 710 sequences # 1

consensus_2725#1 length = 153 sequences # 1

consensusID : consensus_2725#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 710
fasta sequence

                              [CCGCCCTGCAGTACTGGGGCCGGGCCGCGGCCCAGGGCTACTCGGCGGCGCAGGTAAAGCTCGGCGACTACCACTACTACGGCATGGGTACACTGATCGACTACGAGATGGCTGCCTCCCACTACAGGATGGCTTCCGAGCAGCAGAACAACGCGCAAGCGATGTTCAATCTCGGCTACATGCACGAGCAGGGGCTCGGTATGAAGAAGGACATTCATCTGGCGAAGCGGTGCTACGATTTGGCCGCGGACTCGAGCGTCGACGCGAAGGTCCCGGTAACGCTGGCCCTCATCAAGCTGCAGCTGCTCTTCAAGCTGGAATCACTGAAAGAGACGCCGTTGAAAATCATCTTCAACCTGGATGAAAATATTGCCTCGAACTGGGACCTGTACCTGATCACGGTCATCACGATACTGTGCGGTGCGGTGCTGTACTTCCGGCGCCCAGTACCGCGTGCCCCACCGGCACCGAACCAAACCGGTGCCGCCACCACCACTGGTGGCAGCAGCCAGCAGGCACCGCCGTCCCCGGCCAGGACCGACCGCGATGACGCACCAGCAACGCCCGCCGCCCCGTCCGGGTCCACCGGCGAGCAGGAGCACCGGGCAGCTGCCAGCGCCAGAAATGCAACAGCAGAAAACCGGGCAAATCGCAATACCGAGCCAGCAGATGCCACGTTAAATGAAAACGTTGAGTAGAGAGGCACATAT]

[+] EMBL BM655232             [CCGCCCTGCAGTACTGGGGCCGGGCCGCGGCCCAGGGCTACTCGGCGGCGCAGGTAAAGCTCGGCGACTACCACTACTACGGCATGGGTACACTGATCGACTACGAGATGGCTGCCTCCCACTACAGGATGGCTTCCGAGCAGCAGAACAACGCGCAAGCGATGTTCAATCTCGGCTACATGCACGAGCAGGGGCTCGGTATGAAGAAGGACATTCATCTGGCGAAGCGGTGCTACGATTTGGCCGCGGACTCGAGCGTCGACGCGAAGGTCCCGGTAACGCTGGCCCTCATCAAGCTGCAGCTGCTCTTCAAGCTGGAATCACTGAAAGAGACGCCGTTGAAAATCATCTTCAACCTGGATGAAAATATTGCCTCGAACTGGGACCTGTACCTGATCACGGTCATCACGATACTGTGCGGTGCGGTGCTGTACTTCCGGCGCCCAGTACCGCGTGCCCCACCGGCACCGAACCAAACCGGTGCCGCCACCACCACTGGTGGCAGCAGCCAGCAGGCACCGCCGTCCCCGGCCAGGACCGACCGCGATGACGCACCAGCAACGCCCGCCGCCCCGTCCGGGTCCACCGGCGAGCAGGAGCACCGGGCAGCTGCCAGCGCCAGAAATGCAACAGCAGAAAACCGGGCAAATCGCAATACCGAGCCAGCAGATGCCACGTTAAATGAAAACGTTGAGTAGAGAGGCACATAT]




>consensus_2725#0
CCGCCCTGCAGTACTGGGGCCGGGCCGCGGCCCAGGGCTACTCGGCGGCGCAGGTAAAGC
TCGGCGACTACCACTACTACGGCATGGGTACACTGATCGACTACGAGATGGCTGCCTCCC
ACTACAGGATGGCTTCCGAGCAGCAGAACAACGCGCAAGCGATGTTCAATCTCGGCTACA
TGCACGAGCAGGGGCTCGGTATGAAGAAGGACATTCATCTGGCGAAGCGGTGCTACGATT
TGGCCGCGGACTCGAGCGTCGACGCGAAGGTCCCGGTAACGCTGGCCCTCATCAAGCTGC
AGCTGCTCTTCAAGCTGGAATCACTGAAAGAGACGCCGTTGAAAATCATCTTCAACCTGG
ATGAAAATATTGCCTCGAACTGGGACCTGTACCTGATCACGGTCATCACGATACTGTGCG
GTGCGGTGCTGTACTTCCGGCGCCCAGTACCGCGTGCCCCACCGGCACCGAACCAAACCG
GTGCCGCCACCACCACTGGTGGCAGCAGCCAGCAGGCACCGCCGTCCCCGGCCAGGACCG
ACCGCGATGACGCACCAGCAACGCCCGCCGCCCCGTCCGGGTCCACCGGCGAGCAGGAGC
ACCGGGCAGCTGCCAGCGCCAGAAATGCAACAGCAGAAAACCGGGCAAATCGCAATACCG
AGCCAGCAGATGCCACGTTAAATGAAAACGTTGAGTAGAGAGGCACATAT

consensusID : consensus_2725#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 153
fasta sequence

                              [CCTTTTACCTTTTTCAACTCACTCAACCCACCCACAGGATGGCTTCCGAGCAGCAGAACAACGCGCAAGCGATGTTCAATCTCGGCTACATGCACGAGCAGGGGCTCGGTATGAAGAAGGACATTCATCTGGCNAAGCGGTGCTACGATTTGG]

[+] EMBL BX626297             [CCTTTTACCTTTTTCAACTCACTCAACCCACCCACAGGATGGCTTCCGAGCAGCAGAACAACGCGCAAGCGATGTTCAATCTCGGCTACATGCACGAGCAGGGGCTCGGTATGAAGAAGGACATTCATCTGGCNAAGCGGTGCTACGATTTGG]




>consensus_2725#1
CCTTTTACCTTTTTCAACTCACTCAACCCACCCACAGGATGGCTTCCGAGCAGCAGAACA
ACGCGCAAGCGATGTTCAATCTCGGCTACATGCACGAGCAGGGGCTCGGTATGAAGAAGG
ACATTCATCTGGCNAAGCGGTGCTACGATTTGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2725#0      CCGCCCTGCAGTACTGGGGCCGGGCCGCGGCCCAGGGCTACTCGGCGGCGCAGGTAAAGC 60
consensus_2725#1      ------------------------------------------------------------
                                                                                  

consensus_2725#0      TCGGCGACTACCACTACTACGGCATGGGTACACTGATCGACTACGAGATGGCTGCCTCCC 120
consensus_2725#1      -----------------------------CCTTTTACCTTTTTCAAC-TCACTCAACCCA 30
                                                    *  * * *   * * *  *  **    ** 

consensus_2725#0      ACTACAGGATGGCTTCCGAGCAGCAGAACAACGCGCAAGCGATGTTCAATCTCGGCTACA 180
consensus_2725#1      CCCACAGGATGGCTTCCGAGCAGCAGAACAACGCGCAAGCGATGTTCAATCTCGGCTACA 90
                       * *********************************************************

consensus_2725#0      TGCACGAGCAGGGGCTCGGTATGAAGAAGGACATTCATCTGGCGAAGCGGTGCTACGATT 240
consensus_2725#1      TGCACGAGCAGGGGCTCGGTATGAAGAAGGACATTCATCTGGCNAAGCGGTGCTACGATT 150
                      ******************************************* ****************

consensus_2725#0      TGGCCGCGGACTCGAGCGTCGACGCGAAGGTCCCGGTAACGCTGGCCCTCATCAAGCTGC 300
consensus_2725#1      TGG--------------------------------------------------------- 153
                      ***                                                         

consensus_2725#0      AGCTGCTCTTCAAGCTGGAATCACTGAAAGAGACGCCGTTGAAAATCATCTTCAACCTGG 360
consensus_2725#1      ------------------------------------------------------------
                                                                                  

consensus_2725#0      ATGAAAATATTGCCTCGAACTGGGACCTGTACCTGATCACGGTCATCACGATACTGTGCG 420
consensus_2725#1      ------------------------------------------------------------
                                                                                  

consensus_2725#0      GTGCGGTGCTGTACTTCCGGCGCCCAGTACCGCGTGCCCCACCGGCACCGAACCAAACCG 480
consensus_2725#1      ------------------------------------------------------------
                                                                                  

consensus_2725#0      GTGCCGCCACCACCACTGGTGGCAGCAGCCAGCAGGCACCGCCGTCCCCGGCCAGGACCG 540
consensus_2725#1      ------------------------------------------------------------
                                                                                  

consensus_2725#0      ACCGCGATGACGCACCAGCAACGCCCGCCGCCCCGTCCGGGTCCACCGGCGAGCAGGAGC 600
consensus_2725#1      ------------------------------------------------------------
                                                                                  

consensus_2725#0      ACCGGGCAGCTGCCAGCGCCAGAAATGCAACAGCAGAAAACCGGGCAAATCGCAATACCG 660
consensus_2725#1      ------------------------------------------------------------
                                                                                  

consensus_2725#0      AGCCAGCAGATGCCACGTTAAATGAAAACGTTGAGTAGAGAGGCACATAT 710
consensus_2725#1      --------------------------------------------------